RNA–Protein interactions for RNA: ENST00000319294.10

UBASH3A-202, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 2,504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-202ENST00000319294 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
UBASH3A-202ENST00000319294 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
UBASH3A-202ENST00000319294 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
UBASH3A-202ENST00000319294 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
UBASH3A-202ENST00000319294 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
UBASH3A-202ENST00000319294 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
UBASH3A-202ENST00000319294 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
UBASH3A-202ENST00000319294 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
UBASH3A-202ENST00000319294 BCANQ96GW7 911 aa17.12■□□□□ 0.33
UBASH3A-202ENST00000319294 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
UBASH3A-202ENST00000319294 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
UBASH3A-202ENST00000319294 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
UBASH3A-202ENST00000319294 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
UBASH3A-202ENST00000319294 MAGI2Q86UL8 1455 aa17.08■□□□□ 0.33
UBASH3A-202ENST00000319294 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.33
UBASH3A-202ENST00000319294 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
UBASH3A-202ENST00000319294 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
UBASH3A-202ENST00000319294 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
UBASH3A-202ENST00000319294 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
UBASH3A-202ENST00000319294 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
UBASH3A-202ENST00000319294 FANCAO15360 1455 aa17.06■□□□□ 0.32
UBASH3A-202ENST00000319294 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
UBASH3A-202ENST00000319294 A2MP01023 1474 aa17.05■□□□□ 0.32
UBASH3A-202ENST00000319294 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
UBASH3A-202ENST00000319294 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
UBASH3A-202ENST00000319294 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
UBASH3A-202ENST00000319294 RTEL1-TNFRSF6BF6WH68 1400 aa17.04■□□□□ 0.32
UBASH3A-202ENST00000319294 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
UBASH3A-202ENST00000319294 ABCA9Q8IUA7 1624 aa17.04■□□□□ 0.32
UBASH3A-202ENST00000319294 FKBP8Q14318 412 aa17.03■□□□□ 0.32
UBASH3A-202ENST00000319294 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
UBASH3A-202ENST00000319294 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
UBASH3A-202ENST00000319294 ATP10AO60312 1499 aa17.01■□□□□ 0.31
UBASH3A-202ENST00000319294 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
UBASH3A-202ENST00000319294 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
UBASH3A-202ENST00000319294 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
UBASH3A-202ENST00000319294 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
UBASH3A-202ENST00000319294 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
UBASH3A-202ENST00000319294 E9PCH4 1651 aa16.98■□□□□ 0.31
UBASH3A-202ENST00000319294 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
UBASH3A-202ENST00000319294 KIF3BO15066 747 aa16.97■□□□□ 0.31
UBASH3A-202ENST00000319294 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
UBASH3A-202ENST00000319294 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
UBASH3A-202ENST00000319294 DEPDC5O75140 1603 aa16.93■□□□□ 0.3
UBASH3A-202ENST00000319294 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
UBASH3A-202ENST00000319294 PTPRTO14522 1441 aa16.91■□□□□ 0.3
UBASH3A-202ENST00000319294 TESK2Q96S53 571 aa16.91■□□□□ 0.3
UBASH3A-202ENST00000319294 NEFLP07196 543 aa16.9■□□□□ 0.3
UBASH3A-202ENST00000319294 TRPM2O94759 1503 aa16.9■□□□□ 0.3
UBASH3A-202ENST00000319294 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
UBASH3A-202ENST00000319294 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.3
UBASH3A-202ENST00000319294 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.29
UBASH3A-202ENST00000319294 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
UBASH3A-202ENST00000319294 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
UBASH3A-202ENST00000319294 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
UBASH3A-202ENST00000319294 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
UBASH3A-202ENST00000319294 TET3O43151 1660 aa16.88■□□□□ 0.29
UBASH3A-202ENST00000319294 KANK1Q14678 1352 aa16.88■□□□□ 0.29
UBASH3A-202ENST00000319294 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
UBASH3A-202ENST00000319294 LAMC1P11047 1609 aa16.87■□□□□ 0.29
UBASH3A-202ENST00000319294 EIF2AK4Q9P2K8 1649 aaKnown RBP16.86■□□□□ 0.29
UBASH3A-202ENST00000319294 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
UBASH3A-202ENST00000319294 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
UBASH3A-202ENST00000319294 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
UBASH3A-202ENST00000319294 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 CEP152O94986 1710 aa16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 MADDQ8WXG6 1647 aa16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 COL17A1Q9UMD9 1497 aaPredicted RBP16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
UBASH3A-202ENST00000319294 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
UBASH3A-202ENST00000319294 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
UBASH3A-202ENST00000319294 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
UBASH3A-202ENST00000319294 MSH5O43196 834 aa16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 RAPGEF3O95398 923 aa16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 RALBP1Q15311 655 aa16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 TMF1P82094 1093 aa16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 PANK3Q9H999 370 aa16.79■□□□□ 0.28
UBASH3A-202ENST00000319294 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
UBASH3A-202ENST00000319294 FRMPD1Q5SYB0 1578 aa16.78■□□□□ 0.28
UBASH3A-202ENST00000319294 GGT6Q6P531 493 aa16.78■□□□□ 0.28
UBASH3A-202ENST00000319294 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
UBASH3A-202ENST00000319294 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.27
UBASH3A-202ENST00000319294 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
UBASH3A-202ENST00000319294 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
UBASH3A-202ENST00000319294 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
UBASH3A-202ENST00000319294 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 CFAP65Q6ZU64 1925 aaKnown RBP16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
UBASH3A-202ENST00000319294 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
UBASH3A-202ENST00000319294 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
UBASH3A-202ENST00000319294 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
UBASH3A-202ENST00000319294 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
UBASH3A-202ENST00000319294 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
UBASH3A-202ENST00000319294 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms