RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
PTPRA-202ENST00000318266 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
PTPRA-202ENST00000318266 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
PTPRA-202ENST00000318266 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
PTPRA-202ENST00000318266 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
PTPRA-202ENST00000318266 USP35Q9P2H5 1018 aa12.81□□□□□ -0.36
PTPRA-202ENST00000318266 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
PTPRA-202ENST00000318266 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
PTPRA-202ENST00000318266 CARD11Q9BXL7 1154 aa12.79□□□□□ -0.36
PTPRA-202ENST00000318266 GSE1Q14687 1217 aa12.78□□□□□ -0.36
PTPRA-202ENST00000318266 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
PTPRA-202ENST00000318266 NFKBIBQ15653 356 aa12.77□□□□□ -0.36
PTPRA-202ENST00000318266 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.36
PTPRA-202ENST00000318266 ZCCHC11Q5TAX3 1644 aaKnown RBP12.77□□□□□ -0.37
PTPRA-202ENST00000318266 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.37
PTPRA-202ENST00000318266 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
PTPRA-202ENST00000318266 CDK13Q14004 1512 aaKnown RBP12.77□□□□□ -0.37
PTPRA-202ENST00000318266 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
PTPRA-202ENST00000318266 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
PTPRA-202ENST00000318266 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
PTPRA-202ENST00000318266 PKD2Q13563 968 aa12.76□□□□□ -0.37
PTPRA-202ENST00000318266 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
PTPRA-202ENST00000318266 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
PTPRA-202ENST00000318266 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
PTPRA-202ENST00000318266 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
PTPRA-202ENST00000318266 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
PTPRA-202ENST00000318266 MS4A1P11836 297 aa12.74□□□□□ -0.37
PTPRA-202ENST00000318266 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
PTPRA-202ENST00000318266 WDR7Q9Y4E6 1490 aa12.73□□□□□ -0.37
PTPRA-202ENST00000318266 KIF15Q9NS87 1388 aa12.73□□□□□ -0.37
PTPRA-202ENST00000318266 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
PTPRA-202ENST00000318266 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
PTPRA-202ENST00000318266 KIAA0556O60303 1618 aa12.72□□□□□ -0.37
PTPRA-202ENST00000318266 DAPK1P53355 1430 aa12.72□□□□□ -0.37
PTPRA-202ENST00000318266 SAMD9Q5K651 1589 aa12.72□□□□□ -0.37
PTPRA-202ENST00000318266 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
PTPRA-202ENST00000318266 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
PTPRA-202ENST00000318266 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.38
PTPRA-202ENST00000318266 ABCC5O15440 1437 aa12.71□□□□□ -0.38
PTPRA-202ENST00000318266 DISP1Q96F81 1524 aa12.7□□□□□ -0.38
PTPRA-202ENST00000318266 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
PTPRA-202ENST00000318266 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
PTPRA-202ENST00000318266 RGS3P49796 1198 aa12.69□□□□□ -0.38
PTPRA-202ENST00000318266 RALBP1Q15311 655 aa12.69□□□□□ -0.38
PTPRA-202ENST00000318266 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
PTPRA-202ENST00000318266 NLRP13Q86W25 1043 aa12.68□□□□□ -0.38
PTPRA-202ENST00000318266 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
PTPRA-202ENST00000318266 ABCA8O94911 1581 aa12.67□□□□□ -0.38
PTPRA-202ENST00000318266 POLR1AO95602 1720 aaPredicted RBP12.66□□□□□ -0.38
PTPRA-202ENST00000318266 PZPP20742 1482 aa12.66□□□□□ -0.38
PTPRA-202ENST00000318266 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
PTPRA-202ENST00000318266 ARXQ96QS3 562 aa12.66□□□□□ -0.38
PTPRA-202ENST00000318266 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
PTPRA-202ENST00000318266 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
PTPRA-202ENST00000318266 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
PTPRA-202ENST00000318266 NEO1Q92859 1461 aa12.65□□□□□ -0.38
PTPRA-202ENST00000318266 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
PTPRA-202ENST00000318266 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
PTPRA-202ENST00000318266 KIAA1107Q9UPP5 1409 aa12.64□□□□□ -0.39
PTPRA-202ENST00000318266 ABCA9Q8IUA7 1624 aa12.63□□□□□ -0.39
PTPRA-202ENST00000318266 KDM5CP41229 1560 aa12.63□□□□□ -0.39
PTPRA-202ENST00000318266 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
PTPRA-202ENST00000318266 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
PTPRA-202ENST00000318266 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
PTPRA-202ENST00000318266 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
PTPRA-202ENST00000318266 NUP155O75694 1391 aa12.61□□□□□ -0.39
PTPRA-202ENST00000318266 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
PTPRA-202ENST00000318266 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
PTPRA-202ENST00000318266 CD109Q6YHK3 1445 aa12.59□□□□□ -0.39
PTPRA-202ENST00000318266 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
PTPRA-202ENST00000318266 KIF14Q15058 1648 aa12.58□□□□□ -0.4
PTPRA-202ENST00000318266 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
PTPRA-202ENST00000318266 CENPQQ7L2Z9 268 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-202ENST00000318266 SLKQ9H2G2 1235 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-202ENST00000318266 POGKQ9P215 609 aa12.58□□□□□ -0.4
PTPRA-202ENST00000318266 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
PTPRA-202ENST00000318266 DNMT1P26358 1616 aaKnown RBP12.58□□□□□ -0.4
PTPRA-202ENST00000318266 PANK3Q9H999 370 aa12.57□□□□□ -0.4
PTPRA-202ENST00000318266 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
PTPRA-202ENST00000318266 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
PTPRA-202ENST00000318266 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
PTPRA-202ENST00000318266 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
PTPRA-202ENST00000318266 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
PTPRA-202ENST00000318266 PTPRMP28827 1452 aa12.56□□□□□ -0.4
PTPRA-202ENST00000318266 ZMYM4Q5VZL5 1548 aa12.55□□□□□ -0.4
PTPRA-202ENST00000318266 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
PTPRA-202ENST00000318266 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
PTPRA-202ENST00000318266 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
PTPRA-202ENST00000318266 ANKRD30AQ9BXX3 1397 aa12.53□□□□□ -0.4
PTPRA-202ENST00000318266 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.4
PTPRA-202ENST00000318266 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.4
PTPRA-202ENST00000318266 POGZQ7Z3K3 1410 aa12.52□□□□□ -0.4
PTPRA-202ENST00000318266 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.41
PTPRA-202ENST00000318266 UHRF1BP1Q6BDS2 1440 aa12.52□□□□□ -0.41
PTPRA-202ENST00000318266 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
PTPRA-202ENST00000318266 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
PTPRA-202ENST00000318266 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
PTPRA-202ENST00000318266 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
PTPRA-202ENST00000318266 SEC24BO95487 1268 aa12.5□□□□□ -0.41
PTPRA-202ENST00000318266 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms