RNA–Protein interactions for RNA: ENST00000315150.9

RAB43-201, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB43, Length 4,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-201ENST00000315150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.341e-6■■■□□ 14.9
RAB43-201ENST00000315150 PAK3O75914 559 aaPredicted RBP23.41■■□□□ 1.34
RAB43-201ENST00000315150 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
RAB43-201ENST00000315150 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.34
RAB43-201ENST00000315150 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.34
RAB43-201ENST00000315150 SUPT6HQ7KZ85 1726 aaKnown RBP23.37■■□□□ 1.33
RAB43-201ENST00000315150 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
RAB43-201ENST00000315150 PTPRKQ15262 1439 aa23.37■■□□□ 1.33
RAB43-201ENST00000315150 ABCC5O15440 1437 aa23.36■■□□□ 1.33
RAB43-201ENST00000315150 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
RAB43-201ENST00000315150 RALBP1Q15311 655 aa23.33■■□□□ 1.33
RAB43-201ENST00000315150 HDGFL2Q7Z4V5 671 aaPredicted RBP23.33■■□□□ 1.33
RAB43-201ENST00000315150 NLRP13Q86W25 1043 aa23.33■■□□□ 1.32
RAB43-201ENST00000315150 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
RAB43-201ENST00000315150 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
RAB43-201ENST00000315150 CCDC7Q96M83 1385 aa23.31■■□□□ 1.32
RAB43-201ENST00000315150 EID1Q9Y6B2 187 aa23.29■■□□□ 1.32
RAB43-201ENST00000315150 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
RAB43-201ENST00000315150 RGS3P49796 1198 aa23.27■■□□□ 1.32
RAB43-201ENST00000315150 CAMSAP2Q08AD1 1489 aa23.27■■□□□ 1.32
RAB43-201ENST00000315150 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
RAB43-201ENST00000315150 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
RAB43-201ENST00000315150 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
RAB43-201ENST00000315150 C11orf95C9JLR9 678 aaPredicted RBP23.25■■□□□ 1.31
RAB43-201ENST00000315150 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
RAB43-201ENST00000315150 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
RAB43-201ENST00000315150 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
RAB43-201ENST00000315150 PPP4R2Q9NY27 417 aa23.24■■□□□ 1.31
RAB43-201ENST00000315150 ATP10BO94823 1461 aa23.24■■□□□ 1.31
RAB43-201ENST00000315150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.23■■□□□ 1.313e-9■■■□□ 17
RAB43-201ENST00000315150 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
RAB43-201ENST00000315150 CABP2Q9NPB3 220 aa23.22■■□□□ 1.31
RAB43-201ENST00000315150 NGDNQ8NEJ9 315 aaKnown RBP23.21■■□□□ 1.31
RAB43-201ENST00000315150 TERF2IPQ9NYB0 399 aa23.2■■□□□ 1.3
RAB43-201ENST00000315150 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
RAB43-201ENST00000315150 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
RAB43-201ENST00000315150 RCAN3Q9UKA8 241 aa23.18■■□□□ 1.3
RAB43-201ENST00000315150 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
RAB43-201ENST00000315150 GPATCH8Q9UKJ3 1502 aaKnown RBP23.18■■□□□ 1.3
RAB43-201ENST00000315150 CENPJQ9HC77 1338 aaPredicted RBP23.17■■□□□ 1.3
RAB43-201ENST00000315150 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
RAB43-201ENST00000315150 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
RAB43-201ENST00000315150 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
RAB43-201ENST00000315150 PLIN1O60240 522 aa23.15■■□□□ 1.3
RAB43-201ENST00000315150 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
RAB43-201ENST00000315150 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
RAB43-201ENST00000315150 CCDC141Q6ZP82 1450 aa23.13■■□□□ 1.29
RAB43-201ENST00000315150 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
RAB43-201ENST00000315150 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
RAB43-201ENST00000315150 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
RAB43-201ENST00000315150 APAF1O14727 1248 aa23.12■■□□□ 1.29
RAB43-201ENST00000315150 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.12■■□□□ 1.29
RAB43-201ENST00000315150 NOP58Q9Y2X3 529 aaKnown RBP23.12■■□□□ 1.29
RAB43-201ENST00000315150 SLC12A5Q9H2X9 1139 aa23.12■■□□□ 1.29
RAB43-201ENST00000315150 PLEKHH2Q8IVE3 1493 aa23.12■■□□□ 1.29
RAB43-201ENST00000315150 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
RAB43-201ENST00000315150 AKNAQ7Z591 1439 aa23.11■■□□□ 1.29
RAB43-201ENST00000315150 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
RAB43-201ENST00000315150 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
RAB43-201ENST00000315150 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
RAB43-201ENST00000315150 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
RAB43-201ENST00000315150 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
RAB43-201ENST00000315150 SLC26A8Q96RN1 970 aa23.06■■□□□ 1.28
RAB43-201ENST00000315150 HSP90AA1P07900 732 aaKnown RBP23.06■■□□□ 1.28
RAB43-201ENST00000315150 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
RAB43-201ENST00000315150 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 DISP1Q96F81 1524 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 KIF14Q15058 1648 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 RAPGEF6Q8TEU7 1601 aa23.05■■□□□ 1.28
RAB43-201ENST00000315150 NUTM2GQ5VZR2 741 aa23.04■■□□□ 1.28
RAB43-201ENST00000315150 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
RAB43-201ENST00000315150 WDR62O43379 1518 aa23.03■■□□□ 1.28
RAB43-201ENST00000315150 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
RAB43-201ENST00000315150 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
RAB43-201ENST00000315150 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
RAB43-201ENST00000315150 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
RAB43-201ENST00000315150 AMPHP49418 695 aa23■■□□□ 1.27
RAB43-201ENST00000315150 KIAA0556O60303 1618 aa23■■□□□ 1.27
RAB43-201ENST00000315150 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
RAB43-201ENST00000315150 FANCAO15360 1455 aa22.99■■□□□ 1.27
RAB43-201ENST00000315150 APBB1O00213 710 aa22.99■■□□□ 1.27
RAB43-201ENST00000315150 GLIPR1L2Q4G1C9 344 aa22.99■■□□□ 1.27
RAB43-201ENST00000315150 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
RAB43-201ENST00000315150 ADGRF5Q8IZF2 1346 aa22.98■■□□□ 1.27
RAB43-201ENST00000315150 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
RAB43-201ENST00000315150 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
RAB43-201ENST00000315150 CDCA7LQ96GN5 454 aa22.98■■□□□ 1.27
RAB43-201ENST00000315150 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
RAB43-201ENST00000315150 IDI1Q13907 227 aa22.97■■□□□ 1.27
RAB43-201ENST00000315150 PNNQ9H307 717 aaKnown RBP22.96■■□□□ 1.27
RAB43-201ENST00000315150 MTHFSP49914 203 aa22.95■■□□□ 1.26
RAB43-201ENST00000315150 MAPKBP1O60336 1514 aa22.95■■□□□ 1.26
RAB43-201ENST00000315150 NUP160Q12769 1436 aa22.94■■□□□ 1.26
RAB43-201ENST00000315150 ASXL2Q76L83 1435 aa22.94■■□□□ 1.26
RAB43-201ENST00000315150 HMOX1P09601 288 aa22.94■■□□□ 1.26
RAB43-201ENST00000315150 COG3Q96JB2 828 aa22.94■■□□□ 1.26
RAB43-201ENST00000315150 PMFBP1Q8TBY8 1022 aa22.94■■□□□ 1.26
RAB43-201ENST00000315150 ZBED9Q6R2W3 1325 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms