RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■■□□ 15.7
TNIP1-201ENST00000315050 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
TNIP1-201ENST00000315050 RALBP1Q15311 655 aa17.02■□□□□ 0.32
TNIP1-201ENST00000315050 BRD4O60885 1362 aaPredicted RBP17.01■□□□□ 0.31
TNIP1-201ENST00000315050 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
TNIP1-201ENST00000315050 ABCA8O94911 1581 aa17■□□□□ 0.31
TNIP1-201ENST00000315050 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
TNIP1-201ENST00000315050 LRPPRCP42704 1394 aaKnown RBP17■□□□□ 0.31
TNIP1-201ENST00000315050 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
TNIP1-201ENST00000315050 PTPRGP23470 1445 aa16.98■□□□□ 0.31
TNIP1-201ENST00000315050 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
TNIP1-201ENST00000315050 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
TNIP1-201ENST00000315050 NBR1Q14596 966 aa16.97■□□□□ 0.31
TNIP1-201ENST00000315050 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
TNIP1-201ENST00000315050 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
TNIP1-201ENST00000315050 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
TNIP1-201ENST00000315050 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
TNIP1-201ENST00000315050 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.3
TNIP1-201ENST00000315050 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
TNIP1-201ENST00000315050 ANP32AP39687 249 aaKnown RBP16.95■□□□□ 0.3
TNIP1-201ENST00000315050 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
TNIP1-201ENST00000315050 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
TNIP1-201ENST00000315050 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
TNIP1-201ENST00000315050 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
TNIP1-201ENST00000315050 PER1O15534 1290 aaPredicted RBP16.91■□□□□ 0.3
TNIP1-201ENST00000315050 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
TNIP1-201ENST00000315050 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
TNIP1-201ENST00000315050 SAMD9LQ8IVG5 1584 aa16.91■□□□□ 0.3
TNIP1-201ENST00000315050 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
TNIP1-201ENST00000315050 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
TNIP1-201ENST00000315050 PANK3Q9H999 370 aa16.89■□□□□ 0.29
TNIP1-201ENST00000315050 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.29
TNIP1-201ENST00000315050 NPM2Q86SE8 214 aaKnown RBP16.88■□□□□ 0.29
TNIP1-201ENST00000315050 E9PCH4 1651 aa16.88■□□□□ 0.29
TNIP1-201ENST00000315050 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
TNIP1-201ENST00000315050 PLA2R1Q13018 1463 aa16.88■□□□□ 0.29
TNIP1-201ENST00000315050 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
TNIP1-201ENST00000315050 PLIN1O60240 522 aa16.87■□□□□ 0.29
TNIP1-201ENST00000315050 A2MP01023 1474 aa16.87■□□□□ 0.29
TNIP1-201ENST00000315050 TESK2Q96S53 571 aa16.87■□□□□ 0.29
TNIP1-201ENST00000315050 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
TNIP1-201ENST00000315050 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
TNIP1-201ENST00000315050 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
TNIP1-201ENST00000315050 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
TNIP1-201ENST00000315050 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
TNIP1-201ENST00000315050 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
TNIP1-201ENST00000315050 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
TNIP1-201ENST00000315050 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
TNIP1-201ENST00000315050 TMF1P82094 1093 aa16.83■□□□□ 0.28
TNIP1-201ENST00000315050 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.28
TNIP1-201ENST00000315050 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
TNIP1-201ENST00000315050 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
TNIP1-201ENST00000315050 TTC37Q6PGP7 1564 aa16.8■□□□□ 0.28
TNIP1-201ENST00000315050 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
TNIP1-201ENST00000315050 SKAP1Q86WV1 359 aa16.79■□□□□ 0.28
TNIP1-201ENST00000315050 PDE4AP27815 886 aa16.79■□□□□ 0.28
TNIP1-201ENST00000315050 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
TNIP1-201ENST00000315050 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-201ENST00000315050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.281e-6■■■□□ 14.6
TNIP1-201ENST00000315050 CRBNQ96SW2 442 aa16.77■□□□□ 0.28
TNIP1-201ENST00000315050 ADAMTS8Q9UP79 889 aa16.77■□□□□ 0.28
TNIP1-201ENST00000315050 UNC13BO14795 1591 aa16.76■□□□□ 0.27
TNIP1-201ENST00000315050 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
TNIP1-201ENST00000315050 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
TNIP1-201ENST00000315050 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
TNIP1-201ENST00000315050 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
TNIP1-201ENST00000315050 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
TNIP1-201ENST00000315050 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
TNIP1-201ENST00000315050 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNIP1-201ENST00000315050 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
TNIP1-201ENST00000315050 MYO5CQ9NQX4 1742 aa16.72■□□□□ 0.27
TNIP1-201ENST00000315050 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.26
TNIP1-201ENST00000315050 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
TNIP1-201ENST00000315050 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
TNIP1-201ENST00000315050 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
TNIP1-201ENST00000315050 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
TNIP1-201ENST00000315050 MS4A1P11836 297 aa16.69■□□□□ 0.26
TNIP1-201ENST00000315050 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
TNIP1-201ENST00000315050 LAMC1P11047 1609 aa16.69■□□□□ 0.26
TNIP1-201ENST00000315050 PLXNC1O60486 1568 aa16.69■□□□□ 0.26
TNIP1-201ENST00000315050 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
TNIP1-201ENST00000315050 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
TNIP1-201ENST00000315050 ATP10AO60312 1499 aa16.67■□□□□ 0.26
TNIP1-201ENST00000315050 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
TNIP1-201ENST00000315050 WDR7Q9Y4E6 1490 aa16.66■□□□□ 0.26
TNIP1-201ENST00000315050 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
TNIP1-201ENST00000315050 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
TNIP1-201ENST00000315050 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
TNIP1-201ENST00000315050 INSRP06213 1382 aa16.65■□□□□ 0.26
TNIP1-201ENST00000315050 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
TNIP1-201ENST00000315050 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
TNIP1-201ENST00000315050 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
TNIP1-201ENST00000315050 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
TNIP1-201ENST00000315050 PLCH2O75038 1416 aa16.64■□□□□ 0.25
TNIP1-201ENST00000315050 CHD1O14646 1710 aa16.64■□□□□ 0.25
TNIP1-201ENST00000315050 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
TNIP1-201ENST00000315050 NEFMP07197 916 aa16.62■□□□□ 0.25
TNIP1-201ENST00000315050 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
TNIP1-201ENST00000315050 RNF17Q9BXT8 1623 aaKnown RBP16.61■□□□□ 0.25
TNIP1-201ENST00000315050 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms