RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
RNF4-201ENST00000314289 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
RNF4-201ENST00000314289 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
RNF4-201ENST00000314289 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
RNF4-201ENST00000314289 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
RNF4-201ENST00000314289 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
RNF4-201ENST00000314289 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
RNF4-201ENST00000314289 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
RNF4-201ENST00000314289 KIF3BO15066 747 aa17.2■□□□□ 0.34
RNF4-201ENST00000314289 ADGRL1O94910 1474 aa17.2■□□□□ 0.34
RNF4-201ENST00000314289 UNC13BO14795 1591 aa17.19■□□□□ 0.34
RNF4-201ENST00000314289 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
RNF4-201ENST00000314289 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
RNF4-201ENST00000314289 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
RNF4-201ENST00000314289 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
RNF4-201ENST00000314289 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
RNF4-201ENST00000314289 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
RNF4-201ENST00000314289 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF4-201ENST00000314289 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
RNF4-201ENST00000314289 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
RNF4-201ENST00000314289 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
RNF4-201ENST00000314289 ABCA9Q8IUA7 1624 aa17.15■□□□□ 0.34
RNF4-201ENST00000314289 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.34
RNF4-201ENST00000314289 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
RNF4-201ENST00000314289 KDM5CP41229 1560 aa17.14■□□□□ 0.33
RNF4-201ENST00000314289 BCANQ96GW7 911 aa17.13■□□□□ 0.33
RNF4-201ENST00000314289 A2MP01023 1474 aa17.13■□□□□ 0.33
RNF4-201ENST00000314289 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
RNF4-201ENST00000314289 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
RNF4-201ENST00000314289 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
RNF4-201ENST00000314289 CD109Q6YHK3 1445 aa17.11■□□□□ 0.33
RNF4-201ENST00000314289 PRAG1Q86YV5 1406 aa17.11■□□□□ 0.33
RNF4-201ENST00000314289 ARAP3Q8WWN8 1544 aa17.1■□□□□ 0.33
RNF4-201ENST00000314289 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
RNF4-201ENST00000314289 MAGI2Q86UL8 1455 aa17.1■□□□□ 0.33
RNF4-201ENST00000314289 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
RNF4-201ENST00000314289 GGT6Q6P531 493 aa17.07■□□□□ 0.32
RNF4-201ENST00000314289 E9PCH4 1651 aa17.06■□□□□ 0.32
RNF4-201ENST00000314289 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
RNF4-201ENST00000314289 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
RNF4-201ENST00000314289 FKBP8Q14318 412 aa17.04■□□□□ 0.32
RNF4-201ENST00000314289 KANK1Q14678 1352 aa17.04■□□□□ 0.32
RNF4-201ENST00000314289 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
RNF4-201ENST00000314289 ATP10AO60312 1499 aa17.04■□□□□ 0.32
RNF4-201ENST00000314289 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
RNF4-201ENST00000314289 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.32
RNF4-201ENST00000314289 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.31
RNF4-201ENST00000314289 UGGT1Q9NYU2 1555 aa17.01■□□□□ 0.31
RNF4-201ENST00000314289 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
RNF4-201ENST00000314289 KIDINS220Q9ULH0 1771 aa17.01■□□□□ 0.31
RNF4-201ENST00000314289 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
RNF4-201ENST00000314289 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
RNF4-201ENST00000314289 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
RNF4-201ENST00000314289 CLTCL1P53675 1640 aa16.97■□□□□ 0.31
RNF4-201ENST00000314289 TESK2Q96S53 571 aa16.97■□□□□ 0.31
RNF4-201ENST00000314289 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
RNF4-201ENST00000314289 POGZQ7Z3K3 1410 aa16.97■□□□□ 0.31
RNF4-201ENST00000314289 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
RNF4-201ENST00000314289 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
RNF4-201ENST00000314289 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
RNF4-201ENST00000314289 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
RNF4-201ENST00000314289 TRPM2O94759 1503 aa16.95■□□□□ 0.3
RNF4-201ENST00000314289 PTPRTO14522 1441 aa16.94■□□□□ 0.3
RNF4-201ENST00000314289 TET3O43151 1660 aa16.94■□□□□ 0.3
RNF4-201ENST00000314289 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
RNF4-201ENST00000314289 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
RNF4-201ENST00000314289 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
RNF4-201ENST00000314289 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
RNF4-201ENST00000314289 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
RNF4-201ENST00000314289 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
RNF4-201ENST00000314289 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
RNF4-201ENST00000314289 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
RNF4-201ENST00000314289 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
RNF4-201ENST00000314289 NEFLP07196 543 aa16.91■□□□□ 0.3
RNF4-201ENST00000314289 VWDEQ8N2E2 1590 aa16.91■□□□□ 0.3
RNF4-201ENST00000314289 CEP152O94986 1710 aa16.91■□□□□ 0.3
RNF4-201ENST00000314289 PANK3Q9H999 370 aa16.9■□□□□ 0.3
RNF4-201ENST00000314289 TMF1P82094 1093 aa16.9■□□□□ 0.3
RNF4-201ENST00000314289 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
RNF4-201ENST00000314289 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
RNF4-201ENST00000314289 MADDQ8WXG6 1647 aa16.88■□□□□ 0.29
RNF4-201ENST00000314289 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
RNF4-201ENST00000314289 HECW2Q9P2P5 1572 aa16.87■□□□□ 0.29
RNF4-201ENST00000314289 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
RNF4-201ENST00000314289 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
RNF4-201ENST00000314289 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
RNF4-201ENST00000314289 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
RNF4-201ENST00000314289 NPATQ14207 1427 aa16.86■□□□□ 0.29
RNF4-201ENST00000314289 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
RNF4-201ENST00000314289 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
RNF4-201ENST00000314289 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
RNF4-201ENST00000314289 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
RNF4-201ENST00000314289 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
RNF4-201ENST00000314289 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
RNF4-201ENST00000314289 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
RNF4-201ENST00000314289 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
RNF4-201ENST00000314289 TSPOAP1O95153 1857 aa16.83■□□□□ 0.29
RNF4-201ENST00000314289 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
RNF4-201ENST00000314289 NEO1Q92859 1461 aa16.82■□□□□ 0.28
RNF4-201ENST00000314289 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms