RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
SEC16A-204ENST00000313084 PANK3Q9H999 370 aa13.43□□□□□ -0.26
SEC16A-204ENST00000313084 TRAPPC8Q9Y2L5 1435 aa13.43□□□□□ -0.26
SEC16A-204ENST00000313084 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
SEC16A-204ENST00000313084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEC16A-204ENST00000313084 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
SEC16A-204ENST00000313084 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
SEC16A-204ENST00000313084 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
SEC16A-204ENST00000313084 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
SEC16A-204ENST00000313084 GGT6Q6P531 493 aa13.41□□□□□ -0.26
SEC16A-204ENST00000313084 CDC42BPBQ9Y5S2 1711 aa13.4□□□□□ -0.26
SEC16A-204ENST00000313084 DISP3Q9P2K9 1392 aa13.4□□□□□ -0.27
SEC16A-204ENST00000313084 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
SEC16A-204ENST00000313084 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
SEC16A-204ENST00000313084 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
SEC16A-204ENST00000313084 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
SEC16A-204ENST00000313084 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
SEC16A-204ENST00000313084 RALGAPBQ86X10 1494 aa13.38□□□□□ -0.27
SEC16A-204ENST00000313084 PLA2R1Q13018 1463 aa13.37□□□□□ -0.27
SEC16A-204ENST00000313084 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
SEC16A-204ENST00000313084 TMF1P82094 1093 aa13.36□□□□□ -0.27
SEC16A-204ENST00000313084 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
SEC16A-204ENST00000313084 MYBBP1AQ9BQG0 1328 aaKnown RBP13.36□□□□□ -0.27
SEC16A-204ENST00000313084 PLIN1O60240 522 aa13.36□□□□□ -0.27
SEC16A-204ENST00000313084 KDM5CP41229 1560 aa13.36□□□□□ -0.27
SEC16A-204ENST00000313084 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
SEC16A-204ENST00000313084 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
SEC16A-204ENST00000313084 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEC16A-204ENST00000313084 PRAG1Q86YV5 1406 aa13.35□□□□□ -0.27
SEC16A-204ENST00000313084 A2MP01023 1474 aa13.35□□□□□ -0.27
SEC16A-204ENST00000313084 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
SEC16A-204ENST00000313084 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
SEC16A-204ENST00000313084 SAFB2Q14151 953 aaKnown RBP eCLIP13.33□□□□□ -0.27
SEC16A-204ENST00000313084 ERICH6Q7L0X2 663 aa13.33□□□□□ -0.27
SEC16A-204ENST00000313084 TESK2Q96S53 571 aa13.33□□□□□ -0.27
SEC16A-204ENST00000313084 PLCH2O75038 1416 aa13.33□□□□□ -0.28
SEC16A-204ENST00000313084 KNSTRNQ9Y448 316 aa13.33□□□□□ -0.28
SEC16A-204ENST00000313084 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
SEC16A-204ENST00000313084 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
SEC16A-204ENST00000313084 RALBP1Q15311 655 aa13.32□□□□□ -0.28
SEC16A-204ENST00000313084 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
SEC16A-204ENST00000313084 ARHGEF5Q12774 1597 aa13.31□□□□□ -0.28
SEC16A-204ENST00000313084 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
SEC16A-204ENST00000313084 MYT1Q01538 1121 aa13.3□□□□□ -0.28
SEC16A-204ENST00000313084 RAPGEF3O95398 923 aa13.29□□□□□ -0.28
SEC16A-204ENST00000313084 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
SEC16A-204ENST00000313084 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
SEC16A-204ENST00000313084 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
SEC16A-204ENST00000313084 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
SEC16A-204ENST00000313084 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
SEC16A-204ENST00000313084 ERBINQ96RT1 1412 aa13.28□□□□□ -0.28
SEC16A-204ENST00000313084 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
SEC16A-204ENST00000313084 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
SEC16A-204ENST00000313084 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
SEC16A-204ENST00000313084 MSH5O43196 834 aa13.28□□□□□ -0.28
SEC16A-204ENST00000313084 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.28
SEC16A-204ENST00000313084 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.28
SEC16A-204ENST00000313084 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.28
SEC16A-204ENST00000313084 FANCAO15360 1455 aa13.27□□□□□ -0.28
SEC16A-204ENST00000313084 ADGRF5Q8IZF2 1346 aa13.27□□□□□ -0.29
SEC16A-204ENST00000313084 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC16A-204ENST00000313084 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.29
SEC16A-204ENST00000313084 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
SEC16A-204ENST00000313084 KANK1Q14678 1352 aa13.26□□□□□ -0.29
SEC16A-204ENST00000313084 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
SEC16A-204ENST00000313084 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
SEC16A-204ENST00000313084 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
SEC16A-204ENST00000313084 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-204ENST00000313084 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
SEC16A-204ENST00000313084 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
SEC16A-204ENST00000313084 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
SEC16A-204ENST00000313084 STK26Q9P289 416 aa13.23□□□□□ -0.29
SEC16A-204ENST00000313084 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
SEC16A-204ENST00000313084 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
SEC16A-204ENST00000313084 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
SEC16A-204ENST00000313084 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
SEC16A-204ENST00000313084 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.3
SEC16A-204ENST00000313084 PPP2R1AP30153 589 aa13.21□□□□□ -0.3
SEC16A-204ENST00000313084 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
SEC16A-204ENST00000313084 ABCC1P33527 1531 aa13.2□□□□□ -0.3
SEC16A-204ENST00000313084 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
SEC16A-204ENST00000313084 MLECQ14165 292 aa13.19□□□□□ -0.3
SEC16A-204ENST00000313084 NBR1Q14596 966 aa13.19□□□□□ -0.3
SEC16A-204ENST00000313084 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
SEC16A-204ENST00000313084 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
SEC16A-204ENST00000313084 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
SEC16A-204ENST00000313084 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
SEC16A-204ENST00000313084 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
SEC16A-204ENST00000313084 ATP10AO60312 1499 aa13.18□□□□□ -0.3
SEC16A-204ENST00000313084 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
SEC16A-204ENST00000313084 SLC12A5Q9H2X9 1139 aa13.17□□□□□ -0.3
SEC16A-204ENST00000313084 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
SEC16A-204ENST00000313084 APAF1O14727 1248 aa13.16□□□□□ -0.3
SEC16A-204ENST00000313084 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
SEC16A-204ENST00000313084 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
SEC16A-204ENST00000313084 UNC13BO14795 1591 aa13.16□□□□□ -0.3
SEC16A-204ENST00000313084 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
SEC16A-204ENST00000313084 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
SEC16A-204ENST00000313084 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.3
SEC16A-204ENST00000313084 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms