RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-201ENST00000311745 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-201ENST00000311745 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
RBFOX1-201ENST00000311745 IQGAP3Q86VI3 1631 aa13.14□□□□□ -0.31
RBFOX1-201ENST00000311745 ABCC1P33527 1531 aa13.13□□□□□ -0.31
RBFOX1-201ENST00000311745 FAM135AQ9P2D6 1515 aa13.12□□□□□ -0.31
RBFOX1-201ENST00000311745 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-201ENST00000311745 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-201ENST00000311745 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
RBFOX1-201ENST00000311745 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
RBFOX1-201ENST00000311745 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
RBFOX1-201ENST00000311745 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
RBFOX1-201ENST00000311745 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
RBFOX1-201ENST00000311745 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
RBFOX1-201ENST00000311745 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
RBFOX1-201ENST00000311745 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-201ENST00000311745 TRPM1Q7Z4N2 1603 aa13.08□□□□□ -0.32
RBFOX1-201ENST00000311745 E9PCH4 1651 aa13.07□□□□□ -0.32
RBFOX1-201ENST00000311745 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
RBFOX1-201ENST00000311745 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
RBFOX1-201ENST00000311745 PLCH2O75038 1416 aa13.07□□□□□ -0.32
RBFOX1-201ENST00000311745 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-201ENST00000311745 FGD1P98174 961 aa13.06□□□□□ -0.32
RBFOX1-201ENST00000311745 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
RBFOX1-201ENST00000311745 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
RBFOX1-201ENST00000311745 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
RBFOX1-201ENST00000311745 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
RBFOX1-201ENST00000311745 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
RBFOX1-201ENST00000311745 PKD2Q13563 968 aa13.05□□□□□ -0.32
RBFOX1-201ENST00000311745 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
RBFOX1-201ENST00000311745 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-201ENST00000311745 NUP155O75694 1391 aa13.03□□□□□ -0.32
RBFOX1-201ENST00000311745 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
RBFOX1-201ENST00000311745 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
RBFOX1-201ENST00000311745 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.32
RBFOX1-201ENST00000311745 MROH1Q8NDA8 1641 aa13.01□□□□□ -0.33
RBFOX1-201ENST00000311745 ATP10AO60312 1499 aa13.01□□□□□ -0.33
RBFOX1-201ENST00000311745 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
RBFOX1-201ENST00000311745 LAMC1P11047 1609 aa13.01□□□□□ -0.33
RBFOX1-201ENST00000311745 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
RBFOX1-201ENST00000311745 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
RBFOX1-201ENST00000311745 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
RBFOX1-201ENST00000311745 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
RBFOX1-201ENST00000311745 ERBINQ96RT1 1412 aa12.99□□□□□ -0.33
RBFOX1-201ENST00000311745 AAMPQ13685 434 aa12.98□□□□□ -0.33
RBFOX1-201ENST00000311745 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
RBFOX1-201ENST00000311745 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
RBFOX1-201ENST00000311745 CEP152O94986 1710 aa12.98□□□□□ -0.33
RBFOX1-201ENST00000311745 A2MP01023 1474 aa12.98□□□□□ -0.33
RBFOX1-201ENST00000311745 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
RBFOX1-201ENST00000311745 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.33
RBFOX1-201ENST00000311745 KIDINS220Q9ULH0 1771 aa12.96□□□□□ -0.34
RBFOX1-201ENST00000311745 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 USP47Q96K76 1375 aa12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-201ENST00000311745 ANP32CO43423 234 aa12.94□□□□□ -0.34
RBFOX1-201ENST00000311745 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 MADDQ8WXG6 1647 aa12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 TET3O43151 1660 aa12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-201ENST00000311745 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
RBFOX1-201ENST00000311745 IFT172Q9UG01 1749 aa12.92□□□□□ -0.34
RBFOX1-201ENST00000311745 IQGAP1P46940 1657 aa12.91□□□□□ -0.34
RBFOX1-201ENST00000311745 TRPM2O94759 1503 aa12.91□□□□□ -0.34
RBFOX1-201ENST00000311745 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
RBFOX1-201ENST00000311745 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-201ENST00000311745 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
RBFOX1-201ENST00000311745 PTPRTO14522 1441 aa12.89□□□□□ -0.35
RBFOX1-201ENST00000311745 FRMPD1Q5SYB0 1578 aa12.89□□□□□ -0.35
RBFOX1-201ENST00000311745 FANCAO15360 1455 aa12.89□□□□□ -0.35
RBFOX1-201ENST00000311745 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
RBFOX1-201ENST00000311745 MROH2AA6NES4 1674 aa12.88□□□□□ -0.35
RBFOX1-201ENST00000311745 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
RBFOX1-201ENST00000311745 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-201ENST00000311745 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
RBFOX1-201ENST00000311745 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
RBFOX1-201ENST00000311745 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-201ENST00000311745 AFAP1Q8N556 730 aa12.85□□□□□ -0.35
RBFOX1-201ENST00000311745 MYOM1P52179 1685 aa12.83□□□□□ -0.35
RBFOX1-201ENST00000311745 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-201ENST00000311745 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
RBFOX1-201ENST00000311745 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
RBFOX1-201ENST00000311745 COL17A1Q9UMD9 1497 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-201ENST00000311745 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 EFCAB6Q5THR3 1501 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 NBPF1Q3BBV0 1214 aa12.82□□□□□ -0.36
RBFOX1-201ENST00000311745 LMTK2Q8IWU2 1503 aa12.81□□□□□ -0.36
RBFOX1-201ENST00000311745 NEFMP07197 916 aa12.8□□□□□ -0.36
RBFOX1-201ENST00000311745 CFAP74Q9C0B2 1584 aa12.8□□□□□ -0.36
RBFOX1-201ENST00000311745 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms