RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
PAAF1-201ENST00000310571 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
PAAF1-201ENST00000310571 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
PAAF1-201ENST00000310571 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
PAAF1-201ENST00000310571 AKNAQ7Z591 1439 aa17.93■□□□□ 0.46
PAAF1-201ENST00000310571 PTPRKQ15262 1439 aa17.93■□□□□ 0.46
PAAF1-201ENST00000310571 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
PAAF1-201ENST00000310571 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
PAAF1-201ENST00000310571 VGFO15240 615 aaPredicted RBP17.92■□□□□ 0.46
PAAF1-201ENST00000310571 KIAA0556O60303 1618 aa17.92■□□□□ 0.46
PAAF1-201ENST00000310571 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
PAAF1-201ENST00000310571 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
PAAF1-201ENST00000310571 GPATCH8Q9UKJ3 1502 aaKnown RBP17.9■□□□□ 0.46
PAAF1-201ENST00000310571 ATP10BO94823 1461 aa17.9■□□□□ 0.46
PAAF1-201ENST00000310571 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
PAAF1-201ENST00000310571 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
PAAF1-201ENST00000310571 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
PAAF1-201ENST00000310571 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
PAAF1-201ENST00000310571 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
PAAF1-201ENST00000310571 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
PAAF1-201ENST00000310571 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
PAAF1-201ENST00000310571 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
PAAF1-201ENST00000310571 NBPF1Q3BBV0 1214 aa17.86■□□□□ 0.45
PAAF1-201ENST00000310571 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
PAAF1-201ENST00000310571 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
PAAF1-201ENST00000310571 DISP1Q96F81 1524 aa17.84■□□□□ 0.45
PAAF1-201ENST00000310571 SOX12O15370 315 aa17.83■□□□□ 0.45
PAAF1-201ENST00000310571 NUP160Q12769 1436 aa17.83■□□□□ 0.44
PAAF1-201ENST00000310571 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
PAAF1-201ENST00000310571 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
PAAF1-201ENST00000310571 LMOD2Q6P5Q4 547 aa17.81■□□□□ 0.44
PAAF1-201ENST00000310571 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
PAAF1-201ENST00000310571 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
PAAF1-201ENST00000310571 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
PAAF1-201ENST00000310571 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
PAAF1-201ENST00000310571 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
PAAF1-201ENST00000310571 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
PAAF1-201ENST00000310571 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
PAAF1-201ENST00000310571 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
PAAF1-201ENST00000310571 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
PAAF1-201ENST00000310571 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
PAAF1-201ENST00000310571 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
PAAF1-201ENST00000310571 CD109Q6YHK3 1445 aa17.77■□□□□ 0.44
PAAF1-201ENST00000310571 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.43
PAAF1-201ENST00000310571 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.43
PAAF1-201ENST00000310571 TMEM132EQ6IEE7 984 aa17.77■□□□□ 0.43
PAAF1-201ENST00000310571 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
PAAF1-201ENST00000310571 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
PAAF1-201ENST00000310571 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
PAAF1-201ENST00000310571 ZBED9Q6R2W3 1325 aa17.73■□□□□ 0.43
PAAF1-201ENST00000310571 NUTM2FA1L443 756 aa17.72■□□□□ 0.43
PAAF1-201ENST00000310571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
PAAF1-201ENST00000310571 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
PAAF1-201ENST00000310571 ITSN2Q9NZM3 1697 aa17.72■□□□□ 0.43
PAAF1-201ENST00000310571 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
PAAF1-201ENST00000310571 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
PAAF1-201ENST00000310571 PDE3BQ13370 1112 aa17.71■□□□□ 0.43
PAAF1-201ENST00000310571 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.43
PAAF1-201ENST00000310571 FANCAO15360 1455 aa17.7■□□□□ 0.42
PAAF1-201ENST00000310571 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
PAAF1-201ENST00000310571 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
PAAF1-201ENST00000310571 PLCH2O75038 1416 aa17.69■□□□□ 0.42
PAAF1-201ENST00000310571 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
PAAF1-201ENST00000310571 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
PAAF1-201ENST00000310571 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
PAAF1-201ENST00000310571 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
PAAF1-201ENST00000310571 RGS3P49796 1198 aa17.65■□□□□ 0.42
PAAF1-201ENST00000310571 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
PAAF1-201ENST00000310571 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
PAAF1-201ENST00000310571 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
PAAF1-201ENST00000310571 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
PAAF1-201ENST00000310571 MS4A1P11836 297 aa17.63■□□□□ 0.41
PAAF1-201ENST00000310571 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
PAAF1-201ENST00000310571 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
PAAF1-201ENST00000310571 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
PAAF1-201ENST00000310571 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
PAAF1-201ENST00000310571 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
PAAF1-201ENST00000310571 CCDC184Q52MB2 194 aa17.6■□□□□ 0.41
PAAF1-201ENST00000310571 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
PAAF1-201ENST00000310571 APAF1O14727 1248 aa17.59■□□□□ 0.41
PAAF1-201ENST00000310571 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
PAAF1-201ENST00000310571 WDR7Q9Y4E6 1490 aa17.59■□□□□ 0.41
PAAF1-201ENST00000310571 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
PAAF1-201ENST00000310571 TRAPPC8Q9Y2L5 1435 aa17.58■□□□□ 0.4
PAAF1-201ENST00000310571 A0A0G2JS52 829 aa17.57■□□□□ 0.4
PAAF1-201ENST00000310571 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
PAAF1-201ENST00000310571 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
PAAF1-201ENST00000310571 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
PAAF1-201ENST00000310571 COG3Q96JB2 828 aa17.55■□□□□ 0.4
PAAF1-201ENST00000310571 DENND4BO75064 1496 aaPredicted RBP17.55■□□□□ 0.4
PAAF1-201ENST00000310571 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
PAAF1-201ENST00000310571 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
PAAF1-201ENST00000310571 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
PAAF1-201ENST00000310571 NBR1Q14596 966 aa17.54■□□□□ 0.4
PAAF1-201ENST00000310571 DUOX2Q9NRD8 1548 aa17.54■□□□□ 0.4
PAAF1-201ENST00000310571 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
PAAF1-201ENST00000310571 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
PAAF1-201ENST00000310571 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
PAAF1-201ENST00000310571 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
PAAF1-201ENST00000310571 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms