RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
SNED1-201ENST00000310397 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
SNED1-201ENST00000310397 TNNT3P45378 269 aaPredicted RBP16.34■□□□□ 0.21
SNED1-201ENST00000310397 TRIM6-TRIM34B2RNG4 842 aa16.34■□□□□ 0.21
SNED1-201ENST00000310397 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
SNED1-201ENST00000310397 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.21
SNED1-201ENST00000310397 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.2
SNED1-201ENST00000310397 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
SNED1-201ENST00000310397 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
SNED1-201ENST00000310397 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
SNED1-201ENST00000310397 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
SNED1-201ENST00000310397 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
SNED1-201ENST00000310397 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNED1-201ENST00000310397 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
SNED1-201ENST00000310397 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
SNED1-201ENST00000310397 ARID3AQ99856 593 aa16.31■□□□□ 0.2
SNED1-201ENST00000310397 AAMPQ13685 434 aa16.31■□□□□ 0.2
SNED1-201ENST00000310397 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
SNED1-201ENST00000310397 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
SNED1-201ENST00000310397 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
SNED1-201ENST00000310397 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
SNED1-201ENST00000310397 PANK3Q9H999 370 aa16.29■□□□□ 0.2
SNED1-201ENST00000310397 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
SNED1-201ENST00000310397 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
SNED1-201ENST00000310397 STK26Q9P289 416 aa16.28■□□□□ 0.2
SNED1-201ENST00000310397 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
SNED1-201ENST00000310397 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.2
SNED1-201ENST00000310397 PLIN1O60240 522 aa16.26■□□□□ 0.19
SNED1-201ENST00000310397 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
SNED1-201ENST00000310397 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
SNED1-201ENST00000310397 REC8O95072 547 aa16.25■□□□□ 0.19
SNED1-201ENST00000310397 DDX19BQ9UMR2 479 aa16.24■□□□□ 0.19
SNED1-201ENST00000310397 SOX12O15370 315 aa16.24■□□□□ 0.19
SNED1-201ENST00000310397 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
SNED1-201ENST00000310397 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
SNED1-201ENST00000310397 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
SNED1-201ENST00000310397 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
SNED1-201ENST00000310397 GGT6Q6P531 493 aa16.23■□□□□ 0.19
SNED1-201ENST00000310397 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
SNED1-201ENST00000310397 NPHP1O15259 732 aa16.22■□□□□ 0.19
SNED1-201ENST00000310397 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
SNED1-201ENST00000310397 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
SNED1-201ENST00000310397 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
SNED1-201ENST00000310397 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
SNED1-201ENST00000310397 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
SNED1-201ENST00000310397 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
SNED1-201ENST00000310397 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.18
SNED1-201ENST00000310397 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
SNED1-201ENST00000310397 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
SNED1-201ENST00000310397 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
SNED1-201ENST00000310397 MIA2Q96PC5 1412 aa16.2■□□□□ 0.18
SNED1-201ENST00000310397 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
SNED1-201ENST00000310397 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
SNED1-201ENST00000310397 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNED1-201ENST00000310397 NOC3LQ8WTT2 800 aaKnown RBP16.19■□□□□ 0.18
SNED1-201ENST00000310397 NUCB2P80303 420 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
SNED1-201ENST00000310397 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
SNED1-201ENST00000310397 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
SNED1-201ENST00000310397 KIF3BO15066 747 aa16.16■□□□□ 0.18
SNED1-201ENST00000310397 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
SNED1-201ENST00000310397 MRE11P49959 708 aa16.16■□□□□ 0.18
SNED1-201ENST00000310397 GPS2Q13227 327 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 TPM3P06753 285 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
SNED1-201ENST00000310397 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
SNED1-201ENST00000310397 H3BQV1 296 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 BECN2A8MW95 431 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 DZIP1LQ8IYY4 767 aaKnown RBP16.15■□□□□ 0.18
SNED1-201ENST00000310397 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
SNED1-201ENST00000310397 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
SNED1-201ENST00000310397 APAF1O14727 1248 aa16.14■□□□□ 0.17
SNED1-201ENST00000310397 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
SNED1-201ENST00000310397 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
SNED1-201ENST00000310397 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
SNED1-201ENST00000310397 C22orf23Q9BZE7 217 aa16.12■□□□□ 0.17
SNED1-201ENST00000310397 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
SNED1-201ENST00000310397 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
SNED1-201ENST00000310397 RILPL2Q969X0 211 aa16.12■□□□□ 0.17
SNED1-201ENST00000310397 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
SNED1-201ENST00000310397 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
SNED1-201ENST00000310397 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
SNED1-201ENST00000310397 FAM13BQ9NYF5 915 aa16.1■□□□□ 0.17
SNED1-201ENST00000310397 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
SNED1-201ENST00000310397 INTS3Q68E01 1043 aaKnown RBP16.1■□□□□ 0.17
SNED1-201ENST00000310397 SUPT6HQ7KZ85 1726 aaKnown RBP16.1■□□□□ 0.17
SNED1-201ENST00000310397 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
SNED1-201ENST00000310397 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
SNED1-201ENST00000310397 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
SNED1-201ENST00000310397 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
SNED1-201ENST00000310397 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
SNED1-201ENST00000310397 TPM1P09493 284 aa16.09■□□□□ 0.17
SNED1-201ENST00000310397 ZNF771Q7L3S4 317 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms