RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 DIP2BQ9P265 1576 aa33.62■■■□□ 2.97
SNCB-201ENST00000310112 ATP10AO60312 1499 aa33.61■■■□□ 2.97
SNCB-201ENST00000310112 HECW2Q9P2P5 1572 aa33.61■■■□□ 2.97
SNCB-201ENST00000310112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.59■■■□□ 2.97
SNCB-201ENST00000310112 MYT1LQ9UL68 1186 aa33.59■■■□□ 2.97
SNCB-201ENST00000310112 KANK1Q14678 1352 aa33.58■■■□□ 2.97
SNCB-201ENST00000310112 VWDEQ8N2E2 1590 aa33.55■■■□□ 2.96
SNCB-201ENST00000310112 A2MP01023 1474 aa33.54■■■□□ 2.96
SNCB-201ENST00000310112 PRDM15P57071 1507 aaPredicted RBP33.53■■■□□ 2.96
SNCB-201ENST00000310112 CCDC144AA2RUR9 1427 aa33.51■■■□□ 2.95
SNCB-201ENST00000310112 TET3O43151 1660 aa33.51■■■□□ 2.95
SNCB-201ENST00000310112 BCORL1Q5H9F3 1711 aa33.5■■■□□ 2.95
SNCB-201ENST00000310112 FAM69CQ0P6D2 419 aa33.48■■■□□ 2.95
SNCB-201ENST00000310112 RICTORQ6R327 1708 aa33.48■■■□□ 2.95
SNCB-201ENST00000310112 RNF17Q9BXT8 1623 aaKnown RBP33.47■■■□□ 2.95
SNCB-201ENST00000310112 UHRF1BP1Q6BDS2 1440 aa33.47■■■□□ 2.95
SNCB-201ENST00000310112 PLA2R1Q13018 1463 aa33.46■■■□□ 2.95
SNCB-201ENST00000310112 KIF3BO15066 747 aa33.46■■■□□ 2.95
SNCB-201ENST00000310112 MROH1Q8NDA8 1641 aa33.43■■■□□ 2.94
SNCB-201ENST00000310112 E9PCH4 1651 aa33.41■■■□□ 2.94
SNCB-201ENST00000310112 LMTK2Q8IWU2 1503 aa33.41■■■□□ 2.94
SNCB-201ENST00000310112 ABCA6Q8N139 1617 aa33.41■■■□□ 2.94
SNCB-201ENST00000310112 EIF4G2P78344 907 aaKnown RBP eCLIP33.4■■■□□ 2.94
SNCB-201ENST00000310112 NBPF8Q3BBV2 869 aa33.39■■■□□ 2.94
SNCB-201ENST00000310112 PTPRTO14522 1441 aa33.39■■■□□ 2.94
SNCB-201ENST00000310112 ZMYM4Q5VZL5 1548 aa33.38■■■□□ 2.93
SNCB-201ENST00000310112 FRMPD1Q5SYB0 1578 aa33.38■■■□□ 2.93
SNCB-201ENST00000310112 TRPM2O94759 1503 aa33.37■■■□□ 2.93
SNCB-201ENST00000310112 PPRC1Q5VV67 1664 aaKnown RBP33.36■■■□□ 2.93
SNCB-201ENST00000310112 DIP2CQ9Y2E4 1556 aa33.35■■■□□ 2.93
SNCB-201ENST00000310112 SPHKAPQ2M3C7 1700 aa33.34■■■□□ 2.93
SNCB-201ENST00000310112 RAPGEF3O95398 923 aa33.34■■■□□ 2.93
SNCB-201ENST00000310112 RALGAPBQ86X10 1494 aa33.31■■■□□ 2.92
SNCB-201ENST00000310112 HSPA5P11021 654 aaKnown RBP33.3■■■□□ 2.92
SNCB-201ENST00000310112 EFCAB6Q5THR3 1501 aa33.3■■■□□ 2.92
SNCB-201ENST00000310112 NEURL4Q96JN8 1562 aa33.28■■■□□ 2.92
SNCB-201ENST00000310112 KIF13AQ9H1H9 1805 aa33.27■■■□□ 2.92
SNCB-201ENST00000310112 MIER1Q8N108 512 aa33.27■■■□□ 2.92
SNCB-201ENST00000310112 STAC3Q96MF2 364 aa33.26■■■□□ 2.92
SNCB-201ENST00000310112 TSPOAP1O95153 1857 aa33.24■■■□□ 2.91
SNCB-201ENST00000310112 SPATA31E1Q6ZUB1 1445 aa33.23■■■□□ 2.91
SNCB-201ENST00000310112 CEP152O94986 1710 aa33.23■■■□□ 2.91
SNCB-201ENST00000310112 DCAF11Q8TEB1 546 aa33.22■■■□□ 2.91
SNCB-201ENST00000310112 REREQ9P2R6 1566 aa33.2■■■□□ 2.91
SNCB-201ENST00000310112 PRAG1Q86YV5 1406 aa33.17■■■□□ 2.9
SNCB-201ENST00000310112 HIRIP3Q9BW71 556 aaPredicted RBP33.17■■■□□ 2.9
SNCB-201ENST00000310112 ZC3H13Q5T200 1668 aaKnown RBP33.17■■■□□ 2.9
SNCB-201ENST00000310112 CLTCL1P53675 1640 aa33.15■■■□□ 2.9
SNCB-201ENST00000310112 YEATS2Q9ULM3 1422 aa33.15■■■□□ 2.9
SNCB-201ENST00000310112 ABCC3O15438 1527 aa33.15■■■□□ 2.9
SNCB-201ENST00000310112 DDX10Q13206 875 aaKnown RBP33.15■■■□□ 2.9
SNCB-201ENST00000310112 ZNF326Q5BKZ1 582 aaKnown RBP33.12■■■□□ 2.89
SNCB-201ENST00000310112 KDM2AQ9Y2K7 1162 aa33.11■■■□□ 2.89
SNCB-201ENST00000310112 TRPM1Q7Z4N2 1603 aa33.11■■■□□ 2.89
SNCB-201ENST00000310112 POLR1AO95602 1720 aaPredicted RBP33.11■■■□□ 2.89
SNCB-201ENST00000310112 GGT6Q6P531 493 aa33.1■■■□□ 2.89
SNCB-201ENST00000310112 LAMC1P11047 1609 aa33.1■■■□□ 2.89
SNCB-201ENST00000310112 AGLP35573 1532 aa33.1■■■□□ 2.89
SNCB-201ENST00000310112 USP47Q96K76 1375 aa33.1■■■□□ 2.89
SNCB-201ENST00000310112 RGL3Q3MIN7 710 aa33.09■■■□□ 2.89
SNCB-201ENST00000310112 ARHGAP31Q2M1Z3 1444 aa33.09■■■□□ 2.89
SNCB-201ENST00000310112 CNTLNQ9NXG0 1405 aa33.08■■■□□ 2.89
SNCB-201ENST00000310112 WASHC2CQ9Y4E1 1318 aa33.08■■■□□ 2.89
SNCB-201ENST00000310112 CAMSAP1Q5T5Y3 1602 aa33.07■■■□□ 2.88
SNCB-201ENST00000310112 GPRASP1Q5JY77 1395 aa33.06■■■□□ 2.88
SNCB-201ENST00000310112 CARD11Q9BXL7 1154 aa33.05■■■□□ 2.88
SNCB-201ENST00000310112 PPP6R1Q9UPN7 881 aa33.05■■■□□ 2.88
SNCB-201ENST00000310112 NPATQ14207 1427 aa33.05■■■□□ 2.88
SNCB-201ENST00000310112 KIF1BO60333 1816 aa33.05■■■□□ 2.88
SNCB-201ENST00000310112 ARID4BQ4LE39 1312 aaPredicted RBP33.04■■■□□ 2.88
SNCB-201ENST00000310112 ROCK2O75116 1388 aaKnown RBP33.03■■■□□ 2.88
SNCB-201ENST00000310112 WASHC2AQ641Q2 1341 aa33.02■■■□□ 2.88
SNCB-201ENST00000310112 CCDC7Q96M83 1385 aa33.02■■■□□ 2.88
SNCB-201ENST00000310112 ARHGEF40Q8TER5 1519 aa32.97■■■□□ 2.87
SNCB-201ENST00000310112 NOS1P29475 1434 aa32.97■■■□□ 2.87
SNCB-201ENST00000310112 MADDQ8WXG6 1647 aa32.96■■■□□ 2.87
SNCB-201ENST00000310112 MYOM2P54296 1465 aa32.94■■■□□ 2.86
SNCB-201ENST00000310112 ANP32CO43423 234 aa32.92■■■□□ 2.86
SNCB-201ENST00000310112 ADGRB3O60242 1522 aa32.92■■■□□ 2.86
SNCB-201ENST00000310112 KIAA1210Q9ULL0 1709 aa32.91■■■□□ 2.86
SNCB-201ENST00000310112 COL17A1Q9UMD9 1497 aaPredicted RBP32.91■■■□□ 2.86
SNCB-201ENST00000310112 CENPBP07199 599 aaPredicted RBP32.9■■■□□ 2.86
SNCB-201ENST00000310112 KIF7Q2M1P5 1343 aa32.88■■■□□ 2.85
SNCB-201ENST00000310112 UGGT1Q9NYU2 1555 aa32.88■■■□□ 2.85
SNCB-201ENST00000310112 PIK3C2BO00750 1634 aa32.87■■■□□ 2.85
SNCB-201ENST00000310112 IFT172Q9UG01 1749 aa32.87■■■□□ 2.85
SNCB-201ENST00000310112 RPGRIP1LQ68CZ1 1315 aa32.86■■■□□ 2.85
SNCB-201ENST00000310112 C11orf95C9JLR9 678 aaPredicted RBP32.85■■■□□ 2.85
SNCB-201ENST00000310112 CCER2I3L3R5 266 aa32.84■■■□□ 2.85
SNCB-201ENST00000310112 SIGLEC1Q9BZZ2 1709 aa32.83■■■□□ 2.85
SNCB-201ENST00000310112 MROH2AA6NES4 1674 aa32.82■■■□□ 2.84
SNCB-201ENST00000310112 NBPF1Q3BBV0 1214 aa32.81■■■□□ 2.84
SNCB-201ENST00000310112 SLC52A1Q9NWF4 448 aa32.81■■■□□ 2.84
SNCB-201ENST00000310112 SYNMO15061 1565 aa32.8■■■□□ 2.84
SNCB-201ENST00000310112 NRXN1Q9ULB1 1477 aa32.8■■■□□ 2.84
SNCB-201ENST00000310112 ST20-MTHFSA0A0A6YYL1 179 aa32.79■■■□□ 2.84
SNCB-201ENST00000310112 PREX1Q8TCU6 1659 aa32.78■■■□□ 2.84
SNCB-201ENST00000310112 CFAP65Q6ZU64 1925 aaKnown RBP32.77■■■□□ 2.84
SNCB-201ENST00000310112 PPLO60437 1756 aa32.74■■■□□ 2.83
SNCB-201ENST00000310112 IQGAP1P46940 1657 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms