RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 NOM1Q5C9Z4 860 aaKnown RBP10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 CC2D1BQ5T0F9 858 aaKnown RBP10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 FRAT2O75474 233 aaPredicted RBP10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 CEP89Q96ST8 783 aa10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 CWC22Q9HCG8 908 aaKnown RBP10.32□□□□□ -0.76
PPARGC1B-201ENST00000309241 PHF23Q9BUL5 403 aaPredicted RBP10.31□□□□□ -0.76
PPARGC1B-201ENST00000309241 STK26Q9P289 416 aa10.31□□□□□ -0.76
PPARGC1B-201ENST00000309241 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
PPARGC1B-201ENST00000309241 APBB1O00213 710 aa10.31□□□□□ -0.76
PPARGC1B-201ENST00000309241 HDGFL2Q7Z4V5 671 aaPredicted RBP10.31□□□□□ -0.76
PPARGC1B-201ENST00000309241 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.763e-7■■■■□ 25.1
PPARGC1B-201ENST00000309241 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
PPARGC1B-201ENST00000309241 TRIM34Q9BYJ4 488 aa10.3□□□□□ -0.76
PPARGC1B-201ENST00000309241 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
PPARGC1B-201ENST00000309241 MARCH6O60337 910 aa10.3□□□□□ -0.76
PPARGC1B-201ENST00000309241 CTDP1Q9Y5B0 961 aaPredicted RBP10.3□□□□□ -0.76
PPARGC1B-201ENST00000309241 TPM3P06753 285 aa10.29□□□□□ -0.76
PPARGC1B-201ENST00000309241 PMFBP1Q8TBY8 1022 aa10.29□□□□□ -0.76
PPARGC1B-201ENST00000309241 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
PPARGC1B-201ENST00000309241 EID1Q9Y6B2 187 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 WWC1Q8IX03 1113 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 HSP90B1P14625 803 aaKnown RBP10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 TEX35Q5T0J7 233 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 ARHGAP35Q9NRY4 1499 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 CCDC66A2RUB6 948 aa10.28□□□□□ -0.76
PPARGC1B-201ENST00000309241 CAVIN1Q6NZI2 390 aaKnown RBP10.27□□□□□ -0.77
PPARGC1B-201ENST00000309241 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.77
PPARGC1B-201ENST00000309241 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1B-201ENST00000309241 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
PPARGC1B-201ENST00000309241 TMF1P82094 1093 aa10.26□□□□□ -0.77
PPARGC1B-201ENST00000309241 RBM10P98175 930 aaKnown RBP10.26□□□□□ -0.77
PPARGC1B-201ENST00000309241 RWDD1Q9H446 243 aaPredicted RBP10.26□□□□□ -0.77
PPARGC1B-201ENST00000309241 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 SLC4A3P48751 1232 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 CREBRFQ8IUR6 639 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 STK31Q9BXU1 1019 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 KIF16BQ96L93 1317 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 CWC15Q9P013 229 aaKnown RBP10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 SETD5Q9C0A6 1442 aa10.25□□□□□ -0.77
PPARGC1B-201ENST00000309241 ACBD3Q9H3P7 528 aa10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 GGT6Q6P531 493 aa10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 AEBP1Q8IUX7 1158 aa10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 SCAPERQ9BY12 1400 aa10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 TSPYL1Q9H0U9 437 aa10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
PPARGC1B-201ENST00000309241 NFKBIBQ15653 356 aa10.23□□□□□ -0.77
PPARGC1B-201ENST00000309241 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
PPARGC1B-201ENST00000309241 PDE4AP27815 886 aa10.23□□□□□ -0.77
PPARGC1B-201ENST00000309241 HMGN5P82970 282 aaKnown RBP10.23□□□□□ -0.77
PPARGC1B-201ENST00000309241 CDR1P51861 262 aa10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 ZHX1Q9UKY1 873 aaPredicted RBP10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 RAD21O60216 631 aa10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 EVA1CP58658 441 aa10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 ANKRD30AQ9BXX3 1397 aa10.22□□□□□ -0.77
PPARGC1B-201ENST00000309241 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
PPARGC1B-201ENST00000309241 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.77
PPARGC1B-201ENST00000309241 FBXW7Q969H0 707 aa10.21□□□□□ -0.78
PPARGC1B-201ENST00000309241 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.78
PPARGC1B-201ENST00000309241 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
PPARGC1B-201ENST00000309241 HMGB2P26583 209 aaKnown RBP10.2□□□□□ -0.78
PPARGC1B-201ENST00000309241 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
PPARGC1B-201ENST00000309241 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
PPARGC1B-201ENST00000309241 ST18O60284 1047 aa10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 PRDM10Q9NQV6 1147 aa10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 ARGLU1Q9NWB6 273 aaPredicted RBP10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 CCP110O43303 1012 aa10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 HMMRO75330 724 aa10.19□□□□□ -0.78
PPARGC1B-201ENST00000309241 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
PPARGC1B-201ENST00000309241 LTV1Q96GA3 475 aaPredicted RBP10.18□□□□□ -0.78
PPARGC1B-201ENST00000309241 PES1O00541 588 aaKnown RBP10.18□□□□□ -0.78
PPARGC1B-201ENST00000309241 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
PPARGC1B-201ENST00000309241 CCDC43Q96MW1 224 aaKnown RBP10.18□□□□□ -0.78
PPARGC1B-201ENST00000309241 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 CENPQQ7L2Z9 268 aaPredicted RBP10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 CUX1P39880 1505 aa10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 ZBED9Q6R2W3 1325 aa10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 AMPHP49418 695 aa10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 AKAP17AQ02040 695 aaKnown RBP10.17□□□□□ -0.78
PPARGC1B-201ENST00000309241 DIAPH3Q9NSV4 1193 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 CGNL1Q0VF96 1302 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 VPS37DQ86XT2 251 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.16□□□□□ -0.781e-6■■■■■ 324.2
PPARGC1B-201ENST00000309241 RCAN3Q9UKA8 241 aa10.16□□□□□ -0.78
PPARGC1B-201ENST00000309241 UQCRHLA0A096LP55 91 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 UQCRHP07919 91 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 USP8P40818 1118 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 CAGE1Q8TC20 777 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 TPM1P09493 284 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 MRE11P49959 708 aa10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
PPARGC1B-201ENST00000309241 LRRFIP1Q32MZ4 808 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms