RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
PCDHGC3-201ENST00000308177 PDE3BQ13370 1112 aa14.76□□□□□ -0.05
PCDHGC3-201ENST00000308177 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
PCDHGC3-201ENST00000308177 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
PCDHGC3-201ENST00000308177 BECN1Q14457 450 aa14.74□□□□□ -0.05
PCDHGC3-201ENST00000308177 GOLGA2Q08379 1002 aa14.73□□□□□ -0.05
PCDHGC3-201ENST00000308177 KIAA1107Q9UPP5 1409 aa14.73□□□□□ -0.05
PCDHGC3-201ENST00000308177 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
PCDHGC3-201ENST00000308177 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
PCDHGC3-201ENST00000308177 NBPF8Q3BBV2 869 aa14.72□□□□□ -0.05
PCDHGC3-201ENST00000308177 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
PCDHGC3-201ENST00000308177 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
PCDHGC3-201ENST00000308177 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
PCDHGC3-201ENST00000308177 CCDC146Q8IYE0 955 aa14.71□□□□□ -0.05
PCDHGC3-201ENST00000308177 RBM19Q9Y4C8 960 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-201ENST00000308177 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.06
PCDHGC3-201ENST00000308177 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
PCDHGC3-201ENST00000308177 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-201ENST00000308177 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
PCDHGC3-201ENST00000308177 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
PCDHGC3-201ENST00000308177 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
PCDHGC3-201ENST00000308177 ANP32EQ9BTT0 268 aa14.67□□□□□ -0.06
PCDHGC3-201ENST00000308177 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
PCDHGC3-201ENST00000308177 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
PCDHGC3-201ENST00000308177 PTPN23Q9H3S7 1636 aa14.66□□□□□ -0.06
PCDHGC3-201ENST00000308177 A0A0G2JS52 829 aa14.65□□□□□ -0.06
PCDHGC3-201ENST00000308177 TSHZ2Q9NRE2 1034 aa14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 ABCC5O15440 1437 aa14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 ANP32BQ92688 251 aaKnown RBP14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 CENPJQ9HC77 1338 aaPredicted RBP14.64□□□□□ -0.07
PCDHGC3-201ENST00000308177 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-201ENST00000308177 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-201ENST00000308177 NOP58Q9Y2X3 529 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-201ENST00000308177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHGC3-201ENST00000308177 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-201ENST00000308177 SCAPERQ9BY12 1400 aa14.62□□□□□ -0.07
PCDHGC3-201ENST00000308177 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-201ENST00000308177 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
PCDHGC3-201ENST00000308177 CAMSAP2Q08AD1 1489 aa14.61□□□□□ -0.07
PCDHGC3-201ENST00000308177 CFAP70Q5T0N1 1121 aa14.6□□□□□ -0.07
PCDHGC3-201ENST00000308177 TCERG1O14776 1098 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-201ENST00000308177 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
PCDHGC3-201ENST00000308177 RRP7AQ9Y3A4 280 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-201ENST00000308177 CASC1Q6TDU7 716 aa14.59□□□□□ -0.07
PCDHGC3-201ENST00000308177 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
PCDHGC3-201ENST00000308177 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-201ENST00000308177 CCDC141Q6ZP82 1450 aa14.58□□□□□ -0.07
PCDHGC3-201ENST00000308177 AKNAQ7Z591 1439 aa14.58□□□□□ -0.07
PCDHGC3-201ENST00000308177 APAF1O14727 1248 aa14.58□□□□□ -0.08
PCDHGC3-201ENST00000308177 NGDNQ8NEJ9 315 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-201ENST00000308177 TMEM132EQ6IEE7 984 aa14.57□□□□□ -0.08
PCDHGC3-201ENST00000308177 ARXQ96QS3 562 aa14.57□□□□□ -0.08
PCDHGC3-201ENST00000308177 SMC4Q9NTJ3 1288 aa14.57□□□□□ -0.08
PCDHGC3-201ENST00000308177 NCOA1Q15788 1441 aa14.57□□□□□ -0.08
PCDHGC3-201ENST00000308177 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
PCDHGC3-201ENST00000308177 RRP1P56182 461 aaKnown RBP14.56□□□□□ -0.08
PCDHGC3-201ENST00000308177 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
PCDHGC3-201ENST00000308177 CLUAP1Q96AJ1 413 aa14.56□□□□□ -0.08
PCDHGC3-201ENST00000308177 BRD4O60885 1362 aaPredicted RBP14.56□□□□□ -0.08
PCDHGC3-201ENST00000308177 E9PSI1 815 aa14.55□□□□□ -0.08
PCDHGC3-201ENST00000308177 PLIN1O60240 522 aa14.54□□□□□ -0.08
PCDHGC3-201ENST00000308177 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
PCDHGC3-201ENST00000308177 KIF14Q15058 1648 aa14.53□□□□□ -0.08
PCDHGC3-201ENST00000308177 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
PCDHGC3-201ENST00000308177 EXOC6Q8TAG9 804 aa14.53□□□□□ -0.08
PCDHGC3-201ENST00000308177 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.08
PCDHGC3-201ENST00000308177 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.08
PCDHGC3-201ENST00000308177 COG3Q96JB2 828 aa14.52□□□□□ -0.08
PCDHGC3-201ENST00000308177 PTPRKQ15262 1439 aa14.52□□□□□ -0.09
PCDHGC3-201ENST00000308177 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
PCDHGC3-201ENST00000308177 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCDHGC3-201ENST00000308177 AMPHP49418 695 aa14.51□□□□□ -0.09
PCDHGC3-201ENST00000308177 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
PCDHGC3-201ENST00000308177 OS9Q13438 667 aaPredicted RBP14.5□□□□□ -0.09
PCDHGC3-201ENST00000308177 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
PCDHGC3-201ENST00000308177 UGGT2Q9NYU1 1516 aa14.49□□□□□ -0.09
PCDHGC3-201ENST00000308177 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
PCDHGC3-201ENST00000308177 ADAMTS8Q9UP79 889 aa14.49□□□□□ -0.09
PCDHGC3-201ENST00000308177 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
PCDHGC3-201ENST00000308177 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
PCDHGC3-201ENST00000308177 CTTNBP2Q8WZ74 1663 aa14.48□□□□□ -0.09
PCDHGC3-201ENST00000308177 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
PCDHGC3-201ENST00000308177 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
PCDHGC3-201ENST00000308177 CCDC184Q52MB2 194 aa14.47□□□□□ -0.09
PCDHGC3-201ENST00000308177 C11orf95C9JLR9 678 aaPredicted RBP14.47□□□□□ -0.09
PCDHGC3-201ENST00000308177 PPP2R1AP30153 589 aa14.47□□□□□ -0.09
PCDHGC3-201ENST00000308177 SLC52A1Q9NWF4 448 aa14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 RPRD2Q5VT52 1461 aaKnown RBP14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 PNISRQ8TF01 805 aaKnown RBP14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 GGNBP2Q9H3C7 697 aa14.46□□□□□ -0.09
PCDHGC3-201ENST00000308177 RAPGEF6Q8TEU7 1601 aa14.46□□□□□ -0.1
PCDHGC3-201ENST00000308177 APBB1O00213 710 aa14.46□□□□□ -0.1
PCDHGC3-201ENST00000308177 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
PCDHGC3-201ENST00000308177 ATP10BO94823 1461 aa14.45□□□□□ -0.1
PCDHGC3-201ENST00000308177 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms