RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 PDE4AP27815 886 aa23.77■■□□□ 1.4
CNNM3-201ENST00000305510 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
CNNM3-201ENST00000305510 VSIG10Q8N0Z9 540 aa23.77■■□□□ 1.39
CNNM3-201ENST00000305510 RCAN3Q9UKA8 241 aa23.76■■□□□ 1.39
CNNM3-201ENST00000305510 GLIPR1L2Q4G1C9 344 aa23.75■■□□□ 1.39
CNNM3-201ENST00000305510 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
CNNM3-201ENST00000305510 SLC4A3P48751 1232 aa23.74■■□□□ 1.39
CNNM3-201ENST00000305510 PTPRGP23470 1445 aa23.74■■□□□ 1.39
CNNM3-201ENST00000305510 C9orf84Q5VXU9 1444 aa23.74■■□□□ 1.39
CNNM3-201ENST00000305510 NFKBIBQ15653 356 aa23.73■■□□□ 1.39
CNNM3-201ENST00000305510 TEX14Q8IWB6 1497 aa23.73■■□□□ 1.39
CNNM3-201ENST00000305510 PZPP20742 1482 aa23.73■■□□□ 1.39
CNNM3-201ENST00000305510 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
CNNM3-201ENST00000305510 DAXXQ9UER7 740 aaPredicted RBP23.71■■□□□ 1.39
CNNM3-201ENST00000305510 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
CNNM3-201ENST00000305510 ARXQ96QS3 562 aa23.7■■□□□ 1.38
CNNM3-201ENST00000305510 DHX29Q7Z478 1369 aaKnown RBP23.69■■□□□ 1.38
CNNM3-201ENST00000305510 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
CNNM3-201ENST00000305510 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
CNNM3-201ENST00000305510 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
CNNM3-201ENST00000305510 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
CNNM3-201ENST00000305510 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.382e-6■□□□□ 8.6
CNNM3-201ENST00000305510 ZMYND15Q9H091 742 aa23.67■■□□□ 1.38
CNNM3-201ENST00000305510 CCDC144AA2RUR9 1427 aa23.67■■□□□ 1.38
CNNM3-201ENST00000305510 RALBP1Q15311 655 aa23.66■■□□□ 1.38
CNNM3-201ENST00000305510 CCDC146Q8IYE0 955 aa23.66■■□□□ 1.38
CNNM3-201ENST00000305510 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
CNNM3-201ENST00000305510 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
CNNM3-201ENST00000305510 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
CNNM3-201ENST00000305510 KIAA0556O60303 1618 aa23.65■■□□□ 1.38
CNNM3-201ENST00000305510 RRP1P56182 461 aaKnown RBP23.64■■□□□ 1.37
CNNM3-201ENST00000305510 TMF1P82094 1093 aa23.64■■□□□ 1.37
CNNM3-201ENST00000305510 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.37
CNNM3-201ENST00000305510 AFAP1Q8N556 730 aa23.64■■□□□ 1.37
CNNM3-201ENST00000305510 BACH2Q9BYV9 841 aa23.64■■□□□ 1.37
CNNM3-201ENST00000305510 KIF14Q15058 1648 aa23.63■■□□□ 1.37
CNNM3-201ENST00000305510 FAM43AQ8N2R8 423 aa23.62■■□□□ 1.37
CNNM3-201ENST00000305510 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
CNNM3-201ENST00000305510 ATP10BO94823 1461 aa23.59■■□□□ 1.37
CNNM3-201ENST00000305510 DDRGK1Q96HY6 314 aa23.59■■□□□ 1.37
CNNM3-201ENST00000305510 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
CNNM3-201ENST00000305510 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.36
CNNM3-201ENST00000305510 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
CNNM3-201ENST00000305510 DNMT1P26358 1616 aaKnown RBP23.57■■□□□ 1.36
CNNM3-201ENST00000305510 RGS3P49796 1198 aa23.57■■□□□ 1.36
CNNM3-201ENST00000305510 CRBNQ96SW2 442 aa23.56■■□□□ 1.36
CNNM3-201ENST00000305510 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
CNNM3-201ENST00000305510 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
CNNM3-201ENST00000305510 KIF3BO15066 747 aa23.52■■□□□ 1.36
CNNM3-201ENST00000305510 FRAT2O75474 233 aaPredicted RBP23.52■■□□□ 1.36
CNNM3-201ENST00000305510 PLEKHG5O94827 1062 aa23.51■■□□□ 1.35
CNNM3-201ENST00000305510 C20orf194Q5TEA3 1177 aa23.51■■□□□ 1.35
CNNM3-201ENST00000305510 RNF123Q5XPI4 1314 aa23.51■■□□□ 1.35
CNNM3-201ENST00000305510 EIF4G3O43432 1585 aaKnown RBP23.51■■□□□ 1.35
CNNM3-201ENST00000305510 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
CNNM3-201ENST00000305510 NAP1L5Q96NT1 182 aaPredicted RBP23.49■■□□□ 1.35
CNNM3-201ENST00000305510 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
CNNM3-201ENST00000305510 EFCAB2Q5VUJ9 269 aa23.49■■□□□ 1.35
CNNM3-201ENST00000305510 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
CNNM3-201ENST00000305510 PODXL2Q9NZ53 605 aa23.47■■□□□ 1.35
CNNM3-201ENST00000305510 BRD4O60885 1362 aaPredicted RBP23.47■■□□□ 1.35
CNNM3-201ENST00000305510 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
CNNM3-201ENST00000305510 CEP170Q5SW79 1584 aa23.45■■□□□ 1.34
CNNM3-201ENST00000305510 MS4A1P11836 297 aa23.45■■□□□ 1.34
CNNM3-201ENST00000305510 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
CNNM3-201ENST00000305510 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
CNNM3-201ENST00000305510 ARHGAP5Q13017 1502 aa23.45■■□□□ 1.34
CNNM3-201ENST00000305510 PLEKHH2Q8IVE3 1493 aa23.44■■□□□ 1.34
CNNM3-201ENST00000305510 HSP90AA2PQ14568 343 aaPredicted RBP23.44■■□□□ 1.34
CNNM3-201ENST00000305510 RRAGDQ9NQL2 400 aaPredicted RBP23.43■■□□□ 1.34
CNNM3-201ENST00000305510 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
CNNM3-201ENST00000305510 GGT6Q6P531 493 aa23.42■■□□□ 1.34
CNNM3-201ENST00000305510 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
CNNM3-201ENST00000305510 APAF1O14727 1248 aa23.42■■□□□ 1.34
CNNM3-201ENST00000305510 PER1O15534 1290 aaPredicted RBP23.41■■□□□ 1.34
CNNM3-201ENST00000305510 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
CNNM3-201ENST00000305510 TESK2Q96S53 571 aa23.4■■□□□ 1.34
CNNM3-201ENST00000305510 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
CNNM3-201ENST00000305510 PPP2R1AP30153 589 aa23.36■■□□□ 1.33
CNNM3-201ENST00000305510 RALGAPBQ86X10 1494 aa23.35■■□□□ 1.33
CNNM3-201ENST00000305510 HSP90AA1P07900 732 aaKnown RBP23.35■■□□□ 1.33
CNNM3-201ENST00000305510 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
CNNM3-201ENST00000305510 CCDC141Q6ZP82 1450 aa23.34■■□□□ 1.33
CNNM3-201ENST00000305510 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
CNNM3-201ENST00000305510 PDE3BQ13370 1112 aa23.33■■□□□ 1.32
CNNM3-201ENST00000305510 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
CNNM3-201ENST00000305510 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
CNNM3-201ENST00000305510 POGKQ9P215 609 aa23.31■■□□□ 1.32
CNNM3-201ENST00000305510 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
CNNM3-201ENST00000305510 BCAR3O75815 825 aa23.3■■□□□ 1.32
CNNM3-201ENST00000305510 PRAG1Q86YV5 1406 aa23.3■■□□□ 1.32
CNNM3-201ENST00000305510 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
CNNM3-201ENST00000305510 FAM135AQ9P2D6 1515 aa23.29■■□□□ 1.32
CNNM3-201ENST00000305510 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
CNNM3-201ENST00000305510 CLUAP1Q96AJ1 413 aa23.28■■□□□ 1.32
CNNM3-201ENST00000305510 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
CNNM3-201ENST00000305510 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
CNNM3-201ENST00000305510 STK26Q9P289 416 aa23.27■■□□□ 1.32
CNNM3-201ENST00000305510 KDM5CP41229 1560 aa23.26■■□□□ 1.31
CNNM3-201ENST00000305510 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms