RNA–Protein interactions for RNA: ENST00000303045.10

COL22A1-201, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL22A1, Length 6,346 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-201ENST00000303045 IFFO2Q5TF58 517 aa17.33■□□□□ 0.36
COL22A1-201ENST00000303045 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
COL22A1-201ENST00000303045 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
COL22A1-201ENST00000303045 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
COL22A1-201ENST00000303045 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
COL22A1-201ENST00000303045 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
COL22A1-201ENST00000303045 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
COL22A1-201ENST00000303045 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
COL22A1-201ENST00000303045 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
COL22A1-201ENST00000303045 TCEAL9Q9UHQ7 104 aa17.31■□□□□ 0.36
COL22A1-201ENST00000303045 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
COL22A1-201ENST00000303045 KIF3BO15066 747 aa17.3■□□□□ 0.36
COL22A1-201ENST00000303045 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
COL22A1-201ENST00000303045 NUP155O75694 1391 aa17.3■□□□□ 0.36
COL22A1-201ENST00000303045 EVA1CP58658 441 aa17.3■□□□□ 0.36
COL22A1-201ENST00000303045 RALBP1Q15311 655 aa17.3■□□□□ 0.36
COL22A1-201ENST00000303045 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
COL22A1-201ENST00000303045 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
COL22A1-201ENST00000303045 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
COL22A1-201ENST00000303045 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
COL22A1-201ENST00000303045 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
COL22A1-201ENST00000303045 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
COL22A1-201ENST00000303045 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
COL22A1-201ENST00000303045 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
COL22A1-201ENST00000303045 AKAP17AQ02040 695 aaKnown RBP17.28■□□□□ 0.36
COL22A1-201ENST00000303045 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
COL22A1-201ENST00000303045 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
COL22A1-201ENST00000303045 ST18O60284 1047 aa17.28■□□□□ 0.36
COL22A1-201ENST00000303045 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
COL22A1-201ENST00000303045 CUX2O14529 1486 aa17.27■□□□□ 0.36
COL22A1-201ENST00000303045 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
COL22A1-201ENST00000303045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
COL22A1-201ENST00000303045 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
COL22A1-201ENST00000303045 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
COL22A1-201ENST00000303045 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
COL22A1-201ENST00000303045 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
COL22A1-201ENST00000303045 PHF14O94880 888 aa17.25■□□□□ 0.35
COL22A1-201ENST00000303045 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
COL22A1-201ENST00000303045 TRAK1Q9UPV9 953 aa17.25■□□□□ 0.35
COL22A1-201ENST00000303045 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
COL22A1-201ENST00000303045 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
COL22A1-201ENST00000303045 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
COL22A1-201ENST00000303045 PCMTD1Q96MG8 357 aaPredicted RBP17.24■□□□□ 0.35
COL22A1-201ENST00000303045 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.359e-6■■■■□ 19.4
COL22A1-201ENST00000303045 BCL2L13Q9BXK5 485 aa17.24■□□□□ 0.35
COL22A1-201ENST00000303045 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
COL22A1-201ENST00000303045 TPM2P07951 284 aa17.23■□□□□ 0.35
COL22A1-201ENST00000303045 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
COL22A1-201ENST00000303045 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
COL22A1-201ENST00000303045 NOL10Q9BSC4 688 aaKnown RBP17.22■□□□□ 0.35
COL22A1-201ENST00000303045 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
COL22A1-201ENST00000303045 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
COL22A1-201ENST00000303045 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
COL22A1-201ENST00000303045 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
COL22A1-201ENST00000303045 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
COL22A1-201ENST00000303045 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
COL22A1-201ENST00000303045 MEX3CQ5U5Q3 659 aaKnown RBP17.2■□□□□ 0.34
COL22A1-201ENST00000303045 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
COL22A1-201ENST00000303045 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
COL22A1-201ENST00000303045 APPP05067 770 aa17.19■□□□□ 0.34
COL22A1-201ENST00000303045 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
COL22A1-201ENST00000303045 BECN2A8MW95 431 aa17.18■□□□□ 0.34
COL22A1-201ENST00000303045 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
COL22A1-201ENST00000303045 ZNF592Q92610 1267 aa17.18■□□□□ 0.34
COL22A1-201ENST00000303045 TPM1P09493 284 aa17.17■□□□□ 0.34
COL22A1-201ENST00000303045 VPS37DQ86XT2 251 aa17.17■□□□□ 0.34
COL22A1-201ENST00000303045 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
COL22A1-201ENST00000303045 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
COL22A1-201ENST00000303045 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
COL22A1-201ENST00000303045 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
COL22A1-201ENST00000303045 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
COL22A1-201ENST00000303045 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
COL22A1-201ENST00000303045 FOSBP53539 338 aa17.15■□□□□ 0.34
COL22A1-201ENST00000303045 TRIM29Q14134 588 aa17.15■□□□□ 0.34
COL22A1-201ENST00000303045 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
COL22A1-201ENST00000303045 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.34
COL22A1-201ENST00000303045 TEFQ10587 303 aa17.14■□□□□ 0.33
COL22A1-201ENST00000303045 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
COL22A1-201ENST00000303045 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
COL22A1-201ENST00000303045 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
COL22A1-201ENST00000303045 PLIN1O60240 522 aa17.13■□□□□ 0.33
COL22A1-201ENST00000303045 COG3Q96JB2 828 aa17.13■□□□□ 0.33
COL22A1-201ENST00000303045 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
COL22A1-201ENST00000303045 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
COL22A1-201ENST00000303045 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
COL22A1-201ENST00000303045 CCDC43Q96MW1 224 aaKnown RBP17.11■□□□□ 0.33
COL22A1-201ENST00000303045 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
COL22A1-201ENST00000303045 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
COL22A1-201ENST00000303045 SOGA1O94964 1423 aa17.1■□□□□ 0.33
COL22A1-201ENST00000303045 FYB1O15117 783 aa17.09■□□□□ 0.33
COL22A1-201ENST00000303045 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
COL22A1-201ENST00000303045 CPLX1O14810 134 aa17.09■□□□□ 0.33
COL22A1-201ENST00000303045 NLRP13Q86W25 1043 aa17.08■□□□□ 0.33
COL22A1-201ENST00000303045 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
COL22A1-201ENST00000303045 CCDC47Q96A33 483 aaKnown RBP17.08■□□□□ 0.32
COL22A1-201ENST00000303045 PANK3Q9H999 370 aa17.08■□□□□ 0.32
COL22A1-201ENST00000303045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.08■□□□□ 0.325e-6■■■□□ 18.6
COL22A1-201ENST00000303045 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
COL22A1-201ENST00000303045 L3MBTL2Q969R5 705 aa17.08■□□□□ 0.32
COL22A1-201ENST00000303045 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms