RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
CACNB3-201ENST00000301050 HSPA5P11021 654 aaKnown RBP21.35■■□□□ 1.01
CACNB3-201ENST00000301050 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
CACNB3-201ENST00000301050 WASHC2CQ9Y4E1 1318 aa21.34■■□□□ 1.01
CACNB3-201ENST00000301050 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
CACNB3-201ENST00000301050 NEFMP07197 916 aa21.33■■□□□ 1.01
CACNB3-201ENST00000301050 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1.01
CACNB3-201ENST00000301050 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
CACNB3-201ENST00000301050 USP35Q9P2H5 1018 aa21.32■■□□□ 1
CACNB3-201ENST00000301050 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
CACNB3-201ENST00000301050 PLCH2O75038 1416 aa21.31■■□□□ 1
CACNB3-201ENST00000301050 LAS1LQ9Y4W2 734 aaKnown RBP21.31■■□□□ 1
CACNB3-201ENST00000301050 NBPF8Q3BBV2 869 aa21.3■■□□□ 1
CACNB3-201ENST00000301050 MAST1Q9Y2H9 1570 aa21.29■■□□□ 1
CACNB3-201ENST00000301050 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
CACNB3-201ENST00000301050 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
CACNB3-201ENST00000301050 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
CACNB3-201ENST00000301050 RNF123Q5XPI4 1314 aa21.27■■□□□ 1
CACNB3-201ENST00000301050 EFCAB2Q5VUJ9 269 aa21.26■□□□□ 0.99
CACNB3-201ENST00000301050 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
CACNB3-201ENST00000301050 ABCC1P33527 1531 aa21.24■□□□□ 0.99
CACNB3-201ENST00000301050 WDR7Q9Y4E6 1490 aa21.24■□□□□ 0.99
CACNB3-201ENST00000301050 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
CACNB3-201ENST00000301050 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
CACNB3-201ENST00000301050 BRPF3Q9ULD4 1205 aa21.23■□□□□ 0.99
CACNB3-201ENST00000301050 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
CACNB3-201ENST00000301050 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
CACNB3-201ENST00000301050 NUDCQ9Y266 331 aa21.22■□□□□ 0.99
CACNB3-201ENST00000301050 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
CACNB3-201ENST00000301050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.98
CACNB3-201ENST00000301050 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
CACNB3-201ENST00000301050 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
CACNB3-201ENST00000301050 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
CACNB3-201ENST00000301050 UNC13BO14795 1591 aa21.18■□□□□ 0.98
CACNB3-201ENST00000301050 CCDC7Q96M83 1385 aa21.18■□□□□ 0.98
CACNB3-201ENST00000301050 DUOX2Q9NRD8 1548 aa21.16■□□□□ 0.98
CACNB3-201ENST00000301050 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
CACNB3-201ENST00000301050 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.97
CACNB3-201ENST00000301050 AFAP1Q8N556 730 aa21.13■□□□□ 0.97
CACNB3-201ENST00000301050 ABCA9Q8IUA7 1624 aa21.13■□□□□ 0.97
CACNB3-201ENST00000301050 PDE4AP27815 886 aa21.12■□□□□ 0.97
CACNB3-201ENST00000301050 GSE1Q14687 1217 aa21.12■□□□□ 0.97
CACNB3-201ENST00000301050 FANCAO15360 1455 aa21.12■□□□□ 0.97
CACNB3-201ENST00000301050 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
CACNB3-201ENST00000301050 SPAG9O60271 1321 aaKnown RBP21.11■□□□□ 0.97
CACNB3-201ENST00000301050 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
CACNB3-201ENST00000301050 IQGAP3Q86VI3 1631 aa21.1■□□□□ 0.97
CACNB3-201ENST00000301050 ZFYVE16Q7Z3T8 1539 aa21.08■□□□□ 0.97
CACNB3-201ENST00000301050 SPATA31E1Q6ZUB1 1445 aa21.08■□□□□ 0.97
CACNB3-201ENST00000301050 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.97
CACNB3-201ENST00000301050 BACH2Q9BYV9 841 aa21.08■□□□□ 0.96
CACNB3-201ENST00000301050 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
CACNB3-201ENST00000301050 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
CACNB3-201ENST00000301050 PLA2R1Q13018 1463 aa21.05■□□□□ 0.96
CACNB3-201ENST00000301050 DCAF11Q8TEB1 546 aa21.05■□□□□ 0.96
CACNB3-201ENST00000301050 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
CACNB3-201ENST00000301050 ADGRL1O94910 1474 aa21.05■□□□□ 0.96
CACNB3-201ENST00000301050 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
CACNB3-201ENST00000301050 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
CACNB3-201ENST00000301050 SCAPERQ9BY12 1400 aa21.03■□□□□ 0.96
CACNB3-201ENST00000301050 USP47Q96K76 1375 aa21.02■□□□□ 0.96
CACNB3-201ENST00000301050 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.96
CACNB3-201ENST00000301050 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
CACNB3-201ENST00000301050 ATP7AQ04656 1500 aa21.01■□□□□ 0.95
CACNB3-201ENST00000301050 FRAT1Q92837 279 aaPredicted RBP21.01■□□□□ 0.95
CACNB3-201ENST00000301050 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
CACNB3-201ENST00000301050 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
CACNB3-201ENST00000301050 MS4A1P11836 297 aa21.01■□□□□ 0.95
CACNB3-201ENST00000301050 NFKBIBQ15653 356 aa21■□□□□ 0.95
CACNB3-201ENST00000301050 KDM5CP41229 1560 aa21■□□□□ 0.95
CACNB3-201ENST00000301050 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
CACNB3-201ENST00000301050 EXOC6Q8TAG9 804 aa20.99■□□□□ 0.95
CACNB3-201ENST00000301050 POLR1AO95602 1720 aaPredicted RBP20.99■□□□□ 0.95
CACNB3-201ENST00000301050 RSPH6AQ9H0K4 717 aa20.98■□□□□ 0.95
CACNB3-201ENST00000301050 BCORL1Q5H9F3 1711 aa20.98■□□□□ 0.95
CACNB3-201ENST00000301050 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
CACNB3-201ENST00000301050 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
CACNB3-201ENST00000301050 RRP1P56182 461 aaKnown RBP20.95■□□□□ 0.94
CACNB3-201ENST00000301050 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
CACNB3-201ENST00000301050 E9PCH4 1651 aa20.93■□□□□ 0.94
CACNB3-201ENST00000301050 A2MP01023 1474 aa20.93■□□□□ 0.94
CACNB3-201ENST00000301050 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
CACNB3-201ENST00000301050 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
CACNB3-201ENST00000301050 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
CACNB3-201ENST00000301050 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
CACNB3-201ENST00000301050 PKNOX2Q96KN3 472 aa20.91■□□□□ 0.94
CACNB3-201ENST00000301050 FAM43AQ8N2R8 423 aa20.91■□□□□ 0.94
CACNB3-201ENST00000301050 PRAG1Q86YV5 1406 aa20.91■□□□□ 0.94
CACNB3-201ENST00000301050 ATP10AO60312 1499 aa20.91■□□□□ 0.94
CACNB3-201ENST00000301050 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
CACNB3-201ENST00000301050 KIF3BO15066 747 aa20.9■□□□□ 0.94
CACNB3-201ENST00000301050 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.93
CACNB3-201ENST00000301050 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
CACNB3-201ENST00000301050 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
CACNB3-201ENST00000301050 SLC4A3P48751 1232 aa20.87■□□□□ 0.93
CACNB3-201ENST00000301050 ZNF518AQ6AHZ1 1483 aa20.86■□□□□ 0.93
CACNB3-201ENST00000301050 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
CACNB3-201ENST00000301050 CFAP74Q9C0B2 1584 aa20.85■□□□□ 0.93
CACNB3-201ENST00000301050 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
CACNB3-201ENST00000301050 KANK1Q14678 1352 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms