RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
GCN1-201ENST00000300648 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
GCN1-201ENST00000300648 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
GCN1-201ENST00000300648 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
GCN1-201ENST00000300648 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
GCN1-201ENST00000300648 RASSF8Q8NHQ8 419 aa13.9□□□□□ -0.18
GCN1-201ENST00000300648 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
GCN1-201ENST00000300648 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
GCN1-201ENST00000300648 REC8O95072 547 aa13.89□□□□□ -0.19
GCN1-201ENST00000300648 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
GCN1-201ENST00000300648 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
GCN1-201ENST00000300648 ZNF771Q7L3S4 317 aaPredicted RBP13.89□□□□□ -0.19
GCN1-201ENST00000300648 AK7Q96M32 723 aa13.88□□□□□ -0.19
GCN1-201ENST00000300648 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
GCN1-201ENST00000300648 BECN2A8MW95 431 aa13.88□□□□□ -0.19
GCN1-201ENST00000300648 CUX1P39880 1505 aa13.88□□□□□ -0.19
GCN1-201ENST00000300648 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
GCN1-201ENST00000300648 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
GCN1-201ENST00000300648 SF3A1Q15459 793 aaKnown RBP13.87□□□□□ -0.19
GCN1-201ENST00000300648 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
GCN1-201ENST00000300648 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
GCN1-201ENST00000300648 CCDC66A2RUB6 948 aa13.87□□□□□ -0.19
GCN1-201ENST00000300648 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
GCN1-201ENST00000300648 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 GORABQ5T7V8 394 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 SOGA1O94964 1423 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
GCN1-201ENST00000300648 H3BQV1 296 aa13.85□□□□□ -0.19
GCN1-201ENST00000300648 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
GCN1-201ENST00000300648 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
GCN1-201ENST00000300648 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
GCN1-201ENST00000300648 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
GCN1-201ENST00000300648 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
GCN1-201ENST00000300648 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
GCN1-201ENST00000300648 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
GCN1-201ENST00000300648 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
GCN1-201ENST00000300648 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
GCN1-201ENST00000300648 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
GCN1-201ENST00000300648 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
GCN1-201ENST00000300648 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
GCN1-201ENST00000300648 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
GCN1-201ENST00000300648 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
GCN1-201ENST00000300648 CCP110O43303 1012 aa13.82□□□□□ -0.2
GCN1-201ENST00000300648 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
GCN1-201ENST00000300648 ERCC4Q92889 916 aaPredicted RBP13.82□□□□□ -0.2
GCN1-201ENST00000300648 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
GCN1-201ENST00000300648 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
GCN1-201ENST00000300648 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
GCN1-201ENST00000300648 NUCB2P80303 420 aa13.81□□□□□ -0.2
GCN1-201ENST00000300648 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
GCN1-201ENST00000300648 RDXP35241 583 aaKnown RBP13.8□□□□□ -0.2
GCN1-201ENST00000300648 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
GCN1-201ENST00000300648 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
GCN1-201ENST00000300648 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
GCN1-201ENST00000300648 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
GCN1-201ENST00000300648 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
GCN1-201ENST00000300648 E9PSI1 815 aa13.79□□□□□ -0.2
GCN1-201ENST00000300648 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
GCN1-201ENST00000300648 ARID3AQ99856 593 aa13.79□□□□□ -0.2
GCN1-201ENST00000300648 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
GCN1-201ENST00000300648 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
GCN1-201ENST00000300648 NUP155O75694 1391 aa13.78□□□□□ -0.2
GCN1-201ENST00000300648 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
GCN1-201ENST00000300648 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
GCN1-201ENST00000300648 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
GCN1-201ENST00000300648 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
GCN1-201ENST00000300648 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.2
GCN1-201ENST00000300648 CCDC39Q9UFE4 941 aa13.77□□□□□ -0.2
GCN1-201ENST00000300648 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.2
GCN1-201ENST00000300648 RNF20Q5VTR2 975 aa13.77□□□□□ -0.2
GCN1-201ENST00000300648 CHMP5Q9NZZ3 219 aa13.77□□□□□ -0.21
GCN1-201ENST00000300648 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
GCN1-201ENST00000300648 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
GCN1-201ENST00000300648 WIZO95785 1651 aa13.77□□□□□ -0.21
GCN1-201ENST00000300648 PRM3Q9NNZ6 103 aa13.76□□□□□ -0.21
GCN1-201ENST00000300648 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
GCN1-201ENST00000300648 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
GCN1-201ENST00000300648 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
GCN1-201ENST00000300648 PDE4AP27815 886 aa13.75□□□□□ -0.21
GCN1-201ENST00000300648 TRIM29Q14134 588 aa13.75□□□□□ -0.21
GCN1-201ENST00000300648 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
GCN1-201ENST00000300648 CCDC173Q0VFZ6 552 aa13.75□□□□□ -0.21
GCN1-201ENST00000300648 CAVIN1Q6NZI2 390 aaKnown RBP13.75□□□□□ -0.21
GCN1-201ENST00000300648 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
GCN1-201ENST00000300648 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
GCN1-201ENST00000300648 APBB1O00213 710 aa13.74□□□□□ -0.21
GCN1-201ENST00000300648 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
GCN1-201ENST00000300648 MRE11P49959 708 aa13.73□□□□□ -0.21
GCN1-201ENST00000300648 PKD2Q13563 968 aa13.73□□□□□ -0.21
GCN1-201ENST00000300648 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
GCN1-201ENST00000300648 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
GCN1-201ENST00000300648 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
GCN1-201ENST00000300648 MARCH6O60337 910 aa13.73□□□□□ -0.21
GCN1-201ENST00000300648 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
GCN1-201ENST00000300648 CAGE1Q8TC20 777 aa13.71□□□□□ -0.21
GCN1-201ENST00000300648 RRP1P56182 461 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms