RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ADGRL2O95490 1459 aa17.96■□□□□ 0.47
CTDP1-202ENST00000299543 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
CTDP1-202ENST00000299543 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
CTDP1-202ENST00000299543 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
CTDP1-202ENST00000299543 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
CTDP1-202ENST00000299543 NUP160Q12769 1436 aa17.93■□□□□ 0.46
CTDP1-202ENST00000299543 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
CTDP1-202ENST00000299543 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
CTDP1-202ENST00000299543 RALBP1Q15311 655 aa17.93■□□□□ 0.46
CTDP1-202ENST00000299543 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
CTDP1-202ENST00000299543 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
CTDP1-202ENST00000299543 PANK3Q9H999 370 aa17.9■□□□□ 0.46
CTDP1-202ENST00000299543 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
CTDP1-202ENST00000299543 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
CTDP1-202ENST00000299543 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.45
CTDP1-202ENST00000299543 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
CTDP1-202ENST00000299543 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
CTDP1-202ENST00000299543 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.45
CTDP1-202ENST00000299543 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
CTDP1-202ENST00000299543 KDM5CP41229 1560 aa17.88■□□□□ 0.45
CTDP1-202ENST00000299543 RCAN3Q9UKA8 241 aa17.88■□□□□ 0.45
CTDP1-202ENST00000299543 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
CTDP1-202ENST00000299543 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
CTDP1-202ENST00000299543 PLIN1O60240 522 aa17.87■□□□□ 0.45
CTDP1-202ENST00000299543 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
CTDP1-202ENST00000299543 BRD4O60885 1362 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-202ENST00000299543 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
CTDP1-202ENST00000299543 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
CTDP1-202ENST00000299543 ABCA8O94911 1581 aa17.84■□□□□ 0.45
CTDP1-202ENST00000299543 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
CTDP1-202ENST00000299543 ANP32AP39687 249 aaKnown RBP17.83■□□□□ 0.45
CTDP1-202ENST00000299543 RRP1P56182 461 aaKnown RBP17.83■□□□□ 0.45
CTDP1-202ENST00000299543 TMF1P82094 1093 aa17.83■□□□□ 0.45
CTDP1-202ENST00000299543 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
CTDP1-202ENST00000299543 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
CTDP1-202ENST00000299543 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
CTDP1-202ENST00000299543 CROCC2H7BZ55 1655 aa17.81■□□□□ 0.44
CTDP1-202ENST00000299543 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
CTDP1-202ENST00000299543 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
CTDP1-202ENST00000299543 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
CTDP1-202ENST00000299543 PER1O15534 1290 aaPredicted RBP17.79■□□□□ 0.44
CTDP1-202ENST00000299543 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
CTDP1-202ENST00000299543 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
CTDP1-202ENST00000299543 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
CTDP1-202ENST00000299543 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
CTDP1-202ENST00000299543 IPO9Q96P70 1041 aaKnown RBP17.77■□□□□ 0.44
CTDP1-202ENST00000299543 TESK2Q96S53 571 aa17.77■□□□□ 0.44
CTDP1-202ENST00000299543 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
CTDP1-202ENST00000299543 POLR1AO95602 1720 aaPredicted RBP17.77■□□□□ 0.44
CTDP1-202ENST00000299543 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.44
CTDP1-202ENST00000299543 NEFMP07197 916 aa17.77■□□□□ 0.43
CTDP1-202ENST00000299543 SKAP1Q86WV1 359 aa17.77■□□□□ 0.43
CTDP1-202ENST00000299543 LRPPRCP42704 1394 aaKnown RBP17.76■□□□□ 0.43
CTDP1-202ENST00000299543 PKNOX2Q96KN3 472 aa17.76■□□□□ 0.43
CTDP1-202ENST00000299543 SAMD9LQ8IVG5 1584 aa17.75■□□□□ 0.43
CTDP1-202ENST00000299543 WDR43Q15061 677 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDP1-202ENST00000299543 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
CTDP1-202ENST00000299543 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
CTDP1-202ENST00000299543 A2MP01023 1474 aa17.73■□□□□ 0.43
CTDP1-202ENST00000299543 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
CTDP1-202ENST00000299543 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
CTDP1-202ENST00000299543 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
CTDP1-202ENST00000299543 ERBINQ96RT1 1412 aa17.71■□□□□ 0.43
CTDP1-202ENST00000299543 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
CTDP1-202ENST00000299543 CRBNQ96SW2 442 aa17.7■□□□□ 0.42
CTDP1-202ENST00000299543 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
CTDP1-202ENST00000299543 KIF3BO15066 747 aa17.68■□□□□ 0.42
CTDP1-202ENST00000299543 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
CTDP1-202ENST00000299543 ARHGEF5Q12774 1597 aa17.68■□□□□ 0.42
CTDP1-202ENST00000299543 KDM5DQ9BY66 1539 aa17.68■□□□□ 0.42
CTDP1-202ENST00000299543 CDC42BPBQ9Y5S2 1711 aa17.68■□□□□ 0.42
CTDP1-202ENST00000299543 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
CTDP1-202ENST00000299543 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
CTDP1-202ENST00000299543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTDP1-202ENST00000299543 PDE4AP27815 886 aa17.65■□□□□ 0.42
CTDP1-202ENST00000299543 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
CTDP1-202ENST00000299543 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
CTDP1-202ENST00000299543 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
CTDP1-202ENST00000299543 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-202ENST00000299543 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
CTDP1-202ENST00000299543 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
CTDP1-202ENST00000299543 PREX2Q70Z35 1606 aa17.62■□□□□ 0.41
CTDP1-202ENST00000299543 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
CTDP1-202ENST00000299543 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
CTDP1-202ENST00000299543 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
CTDP1-202ENST00000299543 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
CTDP1-202ENST00000299543 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
CTDP1-202ENST00000299543 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
CTDP1-202ENST00000299543 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
CTDP1-202ENST00000299543 APAF1O14727 1248 aa17.57■□□□□ 0.4
CTDP1-202ENST00000299543 PLCH2O75038 1416 aa17.57■□□□□ 0.4
CTDP1-202ENST00000299543 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
CTDP1-202ENST00000299543 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
CTDP1-202ENST00000299543 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
CTDP1-202ENST00000299543 DUOX2Q9NRD8 1548 aa17.55■□□□□ 0.4
CTDP1-202ENST00000299543 RGS3P49796 1198 aa17.55■□□□□ 0.4
CTDP1-202ENST00000299543 BACH2Q9BYV9 841 aa17.54■□□□□ 0.4
CTDP1-202ENST00000299543 CHD1O14646 1710 aa17.54■□□□□ 0.4
CTDP1-202ENST00000299543 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
CTDP1-202ENST00000299543 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms