RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 ANP32EQ9BTT0 268 aa19.08■□□□□ 0.65
CCT2-201ENST00000299300 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.65
CCT2-201ENST00000299300 LAMC1P11047 1609 aa19.08■□□□□ 0.64
CCT2-201ENST00000299300 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
CCT2-201ENST00000299300 CARD11Q9BXL7 1154 aa19.07■□□□□ 0.64
CCT2-201ENST00000299300 PLEKHH2Q8IVE3 1493 aa19.07■□□□□ 0.64
CCT2-201ENST00000299300 KTN1Q86UP2 1357 aaKnown RBP19.06■□□□□ 0.64
CCT2-201ENST00000299300 PLA2R1Q13018 1463 aa19.06■□□□□ 0.64
CCT2-201ENST00000299300 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
CCT2-201ENST00000299300 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
CCT2-201ENST00000299300 MAGI2Q86UL8 1455 aa19.05■□□□□ 0.64
CCT2-201ENST00000299300 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
CCT2-201ENST00000299300 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
CCT2-201ENST00000299300 ATP10AO60312 1499 aa19.03■□□□□ 0.64
CCT2-201ENST00000299300 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.64
CCT2-201ENST00000299300 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
CCT2-201ENST00000299300 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.63
CCT2-201ENST00000299300 DCAF11Q8TEB1 546 aa19.01■□□□□ 0.63
CCT2-201ENST00000299300 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
CCT2-201ENST00000299300 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
CCT2-201ENST00000299300 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
CCT2-201ENST00000299300 ERCC6L2Q5T890 1561 aa19■□□□□ 0.63
CCT2-201ENST00000299300 A2MP01023 1474 aa18.99■□□□□ 0.63
CCT2-201ENST00000299300 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
CCT2-201ENST00000299300 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
CCT2-201ENST00000299300 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
CCT2-201ENST00000299300 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
CCT2-201ENST00000299300 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
CCT2-201ENST00000299300 RALBP1Q15311 655 aa18.97■□□□□ 0.63
CCT2-201ENST00000299300 EIF2AK4Q9P2K8 1649 aaKnown RBP18.97■□□□□ 0.63
CCT2-201ENST00000299300 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
CCT2-201ENST00000299300 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
CCT2-201ENST00000299300 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
CCT2-201ENST00000299300 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
CCT2-201ENST00000299300 PLCH2O75038 1416 aa18.95■□□□□ 0.62
CCT2-201ENST00000299300 ZCCHC11Q5TAX3 1644 aaKnown RBP18.95■□□□□ 0.62
CCT2-201ENST00000299300 ABCC1P33527 1531 aa18.94■□□□□ 0.62
CCT2-201ENST00000299300 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
CCT2-201ENST00000299300 COL17A1Q9UMD9 1497 aaPredicted RBP18.93■□□□□ 0.62
CCT2-201ENST00000299300 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
CCT2-201ENST00000299300 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
CCT2-201ENST00000299300 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
CCT2-201ENST00000299300 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
CCT2-201ENST00000299300 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
CCT2-201ENST00000299300 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
CCT2-201ENST00000299300 WASHC2CQ9Y4E1 1318 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 MSH5O43196 834 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 TESK2Q96S53 571 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 INSRP06213 1382 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
CCT2-201ENST00000299300 EFCAB2Q5VUJ9 269 aa18.84■□□□□ 0.61
CCT2-201ENST00000299300 RTEL1-TNFRSF6BF6WH68 1400 aa18.84■□□□□ 0.61
CCT2-201ENST00000299300 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
CCT2-201ENST00000299300 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
CCT2-201ENST00000299300 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.61
CCT2-201ENST00000299300 MADDQ8WXG6 1647 aa18.83■□□□□ 0.6
CCT2-201ENST00000299300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCT2-201ENST00000299300 IQGAP1P46940 1657 aa18.83■□□□□ 0.6
CCT2-201ENST00000299300 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
CCT2-201ENST00000299300 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
CCT2-201ENST00000299300 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
CCT2-201ENST00000299300 CEP152O94986 1710 aa18.82■□□□□ 0.6
CCT2-201ENST00000299300 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
CCT2-201ENST00000299300 TRPM2O94759 1503 aa18.81■□□□□ 0.6
CCT2-201ENST00000299300 ZFYVE16Q7Z3T8 1539 aa18.8■□□□□ 0.6
CCT2-201ENST00000299300 PTPRTO14522 1441 aa18.79■□□□□ 0.6
CCT2-201ENST00000299300 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
CCT2-201ENST00000299300 TET3O43151 1660 aa18.77■□□□□ 0.6
CCT2-201ENST00000299300 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.59
CCT2-201ENST00000299300 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.59
CCT2-201ENST00000299300 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
CCT2-201ENST00000299300 ABCA9Q8IUA7 1624 aa18.75■□□□□ 0.59
CCT2-201ENST00000299300 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
CCT2-201ENST00000299300 STAC3Q96MF2 364 aa18.75■□□□□ 0.59
CCT2-201ENST00000299300 CLTCL1P53675 1640 aa18.74■□□□□ 0.59
CCT2-201ENST00000299300 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
CCT2-201ENST00000299300 TMF1P82094 1093 aa18.74■□□□□ 0.59
CCT2-201ENST00000299300 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
CCT2-201ENST00000299300 WDR7Q9Y4E6 1490 aa18.73■□□□□ 0.59
CCT2-201ENST00000299300 SPAG9O60271 1321 aaKnown RBP18.72■□□□□ 0.59
CCT2-201ENST00000299300 PANK3Q9H999 370 aa18.71■□□□□ 0.59
CCT2-201ENST00000299300 RRP1P56182 461 aaKnown RBP18.7■□□□□ 0.58
CCT2-201ENST00000299300 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
CCT2-201ENST00000299300 SYNMO15061 1565 aa18.7■□□□□ 0.58
CCT2-201ENST00000299300 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
CCT2-201ENST00000299300 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
CCT2-201ENST00000299300 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
CCT2-201ENST00000299300 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
CCT2-201ENST00000299300 MYOM1P52179 1685 aa18.66■□□□□ 0.58
CCT2-201ENST00000299300 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
CCT2-201ENST00000299300 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
CCT2-201ENST00000299300 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
CCT2-201ENST00000299300 FANCAO15360 1455 aa18.64■□□□□ 0.57
CCT2-201ENST00000299300 IFT172Q9UG01 1749 aa18.62■□□□□ 0.57
CCT2-201ENST00000299300 MYOM2P54296 1465 aa18.62■□□□□ 0.57
CCT2-201ENST00000299300 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
CCT2-201ENST00000299300 KANK1Q14678 1352 aa18.61■□□□□ 0.57
CCT2-201ENST00000299300 MAP3K4Q9Y6R4 1608 aa18.6■□□□□ 0.57
CCT2-201ENST00000299300 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms