RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 MSH5O43196 834 aa18.54■□□□□ 0.56
BCCIP-202ENST00000299130 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
BCCIP-202ENST00000299130 ROCK2O75116 1388 aaKnown RBP18.52■□□□□ 0.56
BCCIP-202ENST00000299130 RGL3Q3MIN7 710 aa18.51■□□□□ 0.55
BCCIP-202ENST00000299130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.552e-7■■■□□ 15.2
BCCIP-202ENST00000299130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.553e-7■□□□□ 8.6
BCCIP-202ENST00000299130 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
BCCIP-202ENST00000299130 PLA2R1Q13018 1463 aa18.51■□□□□ 0.55
BCCIP-202ENST00000299130 ARHGAP5Q13017 1502 aa18.5■□□□□ 0.55
BCCIP-202ENST00000299130 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
BCCIP-202ENST00000299130 NBPF1Q3BBV0 1214 aa18.5■□□□□ 0.55
BCCIP-202ENST00000299130 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
BCCIP-202ENST00000299130 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
BCCIP-202ENST00000299130 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
BCCIP-202ENST00000299130 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
BCCIP-202ENST00000299130 TRPM1Q7Z4N2 1603 aa18.48■□□□□ 0.55
BCCIP-202ENST00000299130 E9PCH4 1651 aa18.47■□□□□ 0.55
BCCIP-202ENST00000299130 UNC13BO14795 1591 aa18.46■□□□□ 0.55
BCCIP-202ENST00000299130 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
BCCIP-202ENST00000299130 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
BCCIP-202ENST00000299130 MAST1Q9Y2H9 1570 aa18.45■□□□□ 0.54
BCCIP-202ENST00000299130 A2MP01023 1474 aa18.44■□□□□ 0.54
BCCIP-202ENST00000299130 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
BCCIP-202ENST00000299130 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
BCCIP-202ENST00000299130 RNF123Q5XPI4 1314 aa18.43■□□□□ 0.54
BCCIP-202ENST00000299130 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
BCCIP-202ENST00000299130 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
BCCIP-202ENST00000299130 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
BCCIP-202ENST00000299130 RALBP1Q15311 655 aa18.41■□□□□ 0.54
BCCIP-202ENST00000299130 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
BCCIP-202ENST00000299130 IQGAP3Q86VI3 1631 aa18.4■□□□□ 0.54
BCCIP-202ENST00000299130 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
BCCIP-202ENST00000299130 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
BCCIP-202ENST00000299130 DISP3Q9P2K9 1392 aa18.38■□□□□ 0.53
BCCIP-202ENST00000299130 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
BCCIP-202ENST00000299130 TESK2Q96S53 571 aa18.37■□□□□ 0.53
BCCIP-202ENST00000299130 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
BCCIP-202ENST00000299130 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
BCCIP-202ENST00000299130 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
BCCIP-202ENST00000299130 PRDM15P57071 1507 aaPredicted RBP18.35■□□□□ 0.53
BCCIP-202ENST00000299130 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
BCCIP-202ENST00000299130 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
BCCIP-202ENST00000299130 PLCH2O75038 1416 aa18.33■□□□□ 0.53
BCCIP-202ENST00000299130 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.52
BCCIP-202ENST00000299130 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.52
BCCIP-202ENST00000299130 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
BCCIP-202ENST00000299130 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
BCCIP-202ENST00000299130 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
BCCIP-202ENST00000299130 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
BCCIP-202ENST00000299130 LAMC1P11047 1609 aa18.31■□□□□ 0.52
BCCIP-202ENST00000299130 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
BCCIP-202ENST00000299130 PANK3Q9H999 370 aa18.31■□□□□ 0.52
BCCIP-202ENST00000299130 ATP10AO60312 1499 aa18.3■□□□□ 0.52
BCCIP-202ENST00000299130 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
BCCIP-202ENST00000299130 ABCC1P33527 1531 aa18.28■□□□□ 0.52
BCCIP-202ENST00000299130 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
BCCIP-202ENST00000299130 AFAP1Q8N556 730 aa18.27■□□□□ 0.51
BCCIP-202ENST00000299130 CDCA7LQ96GN5 454 aa18.25■□□□□ 0.51
BCCIP-202ENST00000299130 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
BCCIP-202ENST00000299130 TMF1P82094 1093 aa18.24■□□□□ 0.51
BCCIP-202ENST00000299130 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
BCCIP-202ENST00000299130 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
BCCIP-202ENST00000299130 RCAN3Q9UKA8 241 aa18.23■□□□□ 0.51
BCCIP-202ENST00000299130 CLASP1Q7Z460 1538 aa18.22■□□□□ 0.51
BCCIP-202ENST00000299130 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
BCCIP-202ENST00000299130 SPAG9O60271 1321 aaKnown RBP18.22■□□□□ 0.51
BCCIP-202ENST00000299130 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
BCCIP-202ENST00000299130 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.5
BCCIP-202ENST00000299130 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
BCCIP-202ENST00000299130 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
BCCIP-202ENST00000299130 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
BCCIP-202ENST00000299130 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
BCCIP-202ENST00000299130 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
BCCIP-202ENST00000299130 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
BCCIP-202ENST00000299130 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
BCCIP-202ENST00000299130 TRPM2O94759 1503 aa18.16■□□□□ 0.5
BCCIP-202ENST00000299130 RTEL1-TNFRSF6BF6WH68 1400 aa18.15■□□□□ 0.5
BCCIP-202ENST00000299130 PTPRTO14522 1441 aa18.14■□□□□ 0.5
BCCIP-202ENST00000299130 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
BCCIP-202ENST00000299130 PLIN1O60240 522 aa18.14■□□□□ 0.49
BCCIP-202ENST00000299130 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
BCCIP-202ENST00000299130 CEP152O94986 1710 aa18.14■□□□□ 0.49
BCCIP-202ENST00000299130 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
BCCIP-202ENST00000299130 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
BCCIP-202ENST00000299130 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
BCCIP-202ENST00000299130 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
BCCIP-202ENST00000299130 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
BCCIP-202ENST00000299130 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
BCCIP-202ENST00000299130 INSRP06213 1382 aa18.1■□□□□ 0.49
BCCIP-202ENST00000299130 KIF3BO15066 747 aa18.1■□□□□ 0.49
BCCIP-202ENST00000299130 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
BCCIP-202ENST00000299130 ATP7AQ04656 1500 aa18.09■□□□□ 0.49
BCCIP-202ENST00000299130 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
BCCIP-202ENST00000299130 TET3O43151 1660 aa18.09■□□□□ 0.49
BCCIP-202ENST00000299130 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
BCCIP-202ENST00000299130 FANCAO15360 1455 aa18.08■□□□□ 0.49
BCCIP-202ENST00000299130 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
BCCIP-202ENST00000299130 SCAPERQ9BY12 1400 aa18.08■□□□□ 0.49
BCCIP-202ENST00000299130 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
BCCIP-202ENST00000299130 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms