RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.27
ARHGEF3-201ENST00000296315 NUP155O75694 1391 aa13.33□□□□□ -0.28
ARHGEF3-201ENST00000296315 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
ARHGEF3-201ENST00000296315 PANK1Q8TE04 598 aa13.32□□□□□ -0.28
ARHGEF3-201ENST00000296315 L1TD1Q5T7N2 865 aaKnown RBP13.32□□□□□ -0.28
ARHGEF3-201ENST00000296315 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
ARHGEF3-201ENST00000296315 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF3-201ENST00000296315 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
ARHGEF3-201ENST00000296315 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
ARHGEF3-201ENST00000296315 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
ARHGEF3-201ENST00000296315 IGHDP01880 384 aa13.3□□□□□ -0.28
ARHGEF3-201ENST00000296315 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
ARHGEF3-201ENST00000296315 APAF1O14727 1248 aa13.29□□□□□ -0.28
ARHGEF3-201ENST00000296315 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
ARHGEF3-201ENST00000296315 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
ARHGEF3-201ENST00000296315 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
ARHGEF3-201ENST00000296315 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.28
ARHGEF3-201ENST00000296315 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
ARHGEF3-201ENST00000296315 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
ARHGEF3-201ENST00000296315 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
ARHGEF3-201ENST00000296315 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
ARHGEF3-201ENST00000296315 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
ARHGEF3-201ENST00000296315 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF3-201ENST00000296315 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
ARHGEF3-201ENST00000296315 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
ARHGEF3-201ENST00000296315 DAPK1P53355 1430 aa13.23□□□□□ -0.29
ARHGEF3-201ENST00000296315 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF3-201ENST00000296315 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
ARHGEF3-201ENST00000296315 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
ARHGEF3-201ENST00000296315 EHBP1L1Q8N3D4 1523 aa13.23□□□□□ -0.29
ARHGEF3-201ENST00000296315 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
ARHGEF3-201ENST00000296315 ABCC5O15440 1437 aa13.22□□□□□ -0.29
ARHGEF3-201ENST00000296315 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
ARHGEF3-201ENST00000296315 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
ARHGEF3-201ENST00000296315 TMF1P82094 1093 aa13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 TNNQ9UQP3 1299 aa13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 TRAK2O60296 914 aa13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
ARHGEF3-201ENST00000296315 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.3
ARHGEF3-201ENST00000296315 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
ARHGEF3-201ENST00000296315 KIAA1107Q9UPP5 1409 aa13.2□□□□□ -0.3
ARHGEF3-201ENST00000296315 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
ARHGEF3-201ENST00000296315 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
ARHGEF3-201ENST00000296315 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
ARHGEF3-201ENST00000296315 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
ARHGEF3-201ENST00000296315 MCM4P33991 863 aa13.18□□□□□ -0.3
ARHGEF3-201ENST00000296315 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF3-201ENST00000296315 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
ARHGEF3-201ENST00000296315 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF3-201ENST00000296315 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
ARHGEF3-201ENST00000296315 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF3-201ENST00000296315 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
ARHGEF3-201ENST00000296315 USP19O94966 1318 aa13.16□□□□□ -0.3
ARHGEF3-201ENST00000296315 EPRSP07814 1512 aaKnown RBP13.16□□□□□ -0.3
ARHGEF3-201ENST00000296315 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 SLFN5Q08AF3 891 aa13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 ESPNB1AK53 854 aa13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 PARD3Q8TEW0 1356 aa13.15□□□□□ -0.3
ARHGEF3-201ENST00000296315 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
ARHGEF3-201ENST00000296315 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
ARHGEF3-201ENST00000296315 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF3-201ENST00000296315 PZPP20742 1482 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 MAPK8IP3Q9UPT6 1336 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 CLCN1P35523 988 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
ARHGEF3-201ENST00000296315 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-201ENST00000296315 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
ARHGEF3-201ENST00000296315 CHMP5Q9NZZ3 219 aa13.11□□□□□ -0.31
ARHGEF3-201ENST00000296315 MRE11P49959 708 aa13.1□□□□□ -0.31
ARHGEF3-201ENST00000296315 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
ARHGEF3-201ENST00000296315 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
ARHGEF3-201ENST00000296315 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
ARHGEF3-201ENST00000296315 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
ARHGEF3-201ENST00000296315 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
ARHGEF3-201ENST00000296315 E9PSI1 815 aa13.08□□□□□ -0.31
ARHGEF3-201ENST00000296315 RLBP1P12271 317 aa13.08□□□□□ -0.31
ARHGEF3-201ENST00000296315 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
ARHGEF3-201ENST00000296315 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
ARHGEF3-201ENST00000296315 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
ARHGEF3-201ENST00000296315 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
ARHGEF3-201ENST00000296315 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
ARHGEF3-201ENST00000296315 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms