RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
LRRC58-201ENST00000295628 NAP1L1P55209 391 aaKnown RBP20.69■□□□□ 0.9
LRRC58-201ENST00000295628 U2AF1L5P0DN76 240 aaPredicted RBP20.69■□□□□ 0.9
LRRC58-201ENST00000295628 U2AF1Q01081 240 aaKnown RBP eCLIP20.69■□□□□ 0.9
LRRC58-201ENST00000295628 APPP05067 770 aa20.69■□□□□ 0.9
LRRC58-201ENST00000295628 NOM1Q5C9Z4 860 aaKnown RBP20.69■□□□□ 0.9
LRRC58-201ENST00000295628 AK7Q96M32 723 aa20.69■□□□□ 0.9
LRRC58-201ENST00000295628 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
LRRC58-201ENST00000295628 IPO9Q96P70 1041 aaKnown RBP20.68■□□□□ 0.9
LRRC58-201ENST00000295628 FAM13BQ9NYF5 915 aa20.68■□□□□ 0.9
LRRC58-201ENST00000295628 RILPL2Q969X0 211 aa20.68■□□□□ 0.9
LRRC58-201ENST00000295628 PLCD4Q9BRC7 762 aa20.68■□□□□ 0.9
LRRC58-201ENST00000295628 IPO7O95373 1038 aaKnown RBP20.67■□□□□ 0.9
LRRC58-201ENST00000295628 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
LRRC58-201ENST00000295628 HMMRO75330 724 aa20.66■□□□□ 0.9
LRRC58-201ENST00000295628 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.66■□□□□ 0.9
LRRC58-201ENST00000295628 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
LRRC58-201ENST00000295628 GTF2E1P29083 439 aaPredicted RBP20.65■□□□□ 0.9
LRRC58-201ENST00000295628 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
LRRC58-201ENST00000295628 CTDP1Q9Y5B0 961 aaPredicted RBP20.65■□□□□ 0.9
LRRC58-201ENST00000295628 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
LRRC58-201ENST00000295628 SKIDA1Q1XH10 827 aa20.64■□□□□ 0.89
LRRC58-201ENST00000295628 TRIM34Q9BYJ4 488 aa20.64■□□□□ 0.89
LRRC58-201ENST00000295628 CT47A1Q5JQC4 288 aaPredicted RBP20.62■□□□□ 0.89
LRRC58-201ENST00000295628 KANK1Q14678 1352 aa20.62■□□□□ 0.89
LRRC58-201ENST00000295628 CLUAP1Q96AJ1 413 aa20.62■□□□□ 0.89
LRRC58-201ENST00000295628 HDGFP51858 240 aaKnown RBP20.61■□□□□ 0.89
LRRC58-201ENST00000295628 CCDC191Q8NCU4 936 aa20.59■□□□□ 0.89
LRRC58-201ENST00000295628 ANKRD20A12PQ8NF67 263 aa20.59■□□□□ 0.89
LRRC58-201ENST00000295628 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
LRRC58-201ENST00000295628 ZFYVE27Q5T4F4 411 aa20.59■□□□□ 0.89
LRRC58-201ENST00000295628 SYNE3Q6ZMZ3 975 aa20.58■□□□□ 0.89
LRRC58-201ENST00000295628 CCDC146Q8IYE0 955 aa20.58■□□□□ 0.89
LRRC58-201ENST00000295628 TRIM29Q14134 588 aa20.58■□□□□ 0.88
LRRC58-201ENST00000295628 CDR1P51861 262 aa20.57■□□□□ 0.88
LRRC58-201ENST00000295628 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
LRRC58-201ENST00000295628 H0YHG0 523 aa20.57■□□□□ 0.88
LRRC58-201ENST00000295628 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
LRRC58-201ENST00000295628 SLC4A3P48751 1232 aa20.55■□□□□ 0.88
LRRC58-201ENST00000295628 CCDC43Q96MW1 224 aaKnown RBP20.54■□□□□ 0.88
LRRC58-201ENST00000295628 CCDC47Q96A33 483 aaKnown RBP20.54■□□□□ 0.88
LRRC58-201ENST00000295628 FOSBP53539 338 aa20.54■□□□□ 0.88
LRRC58-201ENST00000295628 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
LRRC58-201ENST00000295628 DHX16O60231 1041 aaKnown RBP20.54■□□□□ 0.88
LRRC58-201ENST00000295628 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
LRRC58-201ENST00000295628 EPS15P42566 896 aa20.53■□□□□ 0.88
LRRC58-201ENST00000295628 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
LRRC58-201ENST00000295628 HOOK1Q9UJC3 728 aaKnown RBP20.53■□□□□ 0.88
LRRC58-201ENST00000295628 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
LRRC58-201ENST00000295628 DHX37Q8IY37 1157 aaKnown RBP20.52■□□□□ 0.88
LRRC58-201ENST00000295628 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
LRRC58-201ENST00000295628 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
LRRC58-201ENST00000295628 TTLL5Q6EMB2 1281 aa20.51■□□□□ 0.87
LRRC58-201ENST00000295628 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
LRRC58-201ENST00000295628 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
LRRC58-201ENST00000295628 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
LRRC58-201ENST00000295628 ACBD3Q9H3P7 528 aa20.5■□□□□ 0.87
LRRC58-201ENST00000295628 SKOR2Q2VWA4 1001 aaPredicted RBP20.5■□□□□ 0.87
LRRC58-201ENST00000295628 HSP90B2PQ58FF3 399 aa20.5■□□□□ 0.87
LRRC58-201ENST00000295628 DCTN1Q14203 1278 aa20.5■□□□□ 0.87
LRRC58-201ENST00000295628 GSE1Q14687 1217 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
LRRC58-201ENST00000295628 MNS1Q8NEH6 495 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 MSH5O43196 834 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 BICD2Q8TD16 824 aa20.49■□□□□ 0.87
LRRC58-201ENST00000295628 ARGLU1Q9NWB6 273 aaPredicted RBP20.48■□□□□ 0.87
LRRC58-201ENST00000295628 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
LRRC58-201ENST00000295628 ANO2Q9NQ90 1003 aa20.46■□□□□ 0.87
LRRC58-201ENST00000295628 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
LRRC58-201ENST00000295628 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
LRRC58-201ENST00000295628 SASS6Q6UVJ0 657 aa20.45■□□□□ 0.86
LRRC58-201ENST00000295628 PDILTQ8N807 584 aa20.45■□□□□ 0.86
LRRC58-201ENST00000295628 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
LRRC58-201ENST00000295628 CWC15Q9P013 229 aaKnown RBP20.44■□□□□ 0.86
LRRC58-201ENST00000295628 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
LRRC58-201ENST00000295628 NFXL1Q6ZNB6 911 aa20.44■□□□□ 0.86
LRRC58-201ENST00000295628 CCDC173Q0VFZ6 552 aa20.43■□□□□ 0.86
LRRC58-201ENST00000295628 PAF1Q8N7H5 531 aa20.43■□□□□ 0.86
LRRC58-201ENST00000295628 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
LRRC58-201ENST00000295628 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
LRRC58-201ENST00000295628 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
LRRC58-201ENST00000295628 VPS37DQ86XT2 251 aa20.42■□□□□ 0.86
LRRC58-201ENST00000295628 CPLX1O14810 134 aa20.41■□□□□ 0.86
LRRC58-201ENST00000295628 AMPHP49418 695 aa20.41■□□□□ 0.86
LRRC58-201ENST00000295628 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
LRRC58-201ENST00000295628 NEFHP12036 1026 aa20.41■□□□□ 0.86
LRRC58-201ENST00000295628 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
LRRC58-201ENST00000295628 CPLX2Q6PUV4 134 aaKnown RBP20.4■□□□□ 0.86
LRRC58-201ENST00000295628 R3HCC1Q9Y3T6 440 aaKnown RBP20.4■□□□□ 0.86
LRRC58-201ENST00000295628 FOXD1Q16676 465 aa20.4■□□□□ 0.86
LRRC58-201ENST00000295628 ANKRD62A6NC57 917 aa20.4■□□□□ 0.86
LRRC58-201ENST00000295628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.39■□□□□ 0.86
LRRC58-201ENST00000295628 TSPYL1Q9H0U9 437 aa20.39■□□□□ 0.85
LRRC58-201ENST00000295628 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
LRRC58-201ENST00000295628 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
LRRC58-201ENST00000295628 GGT6Q6P531 493 aa20.38■□□□□ 0.85
LRRC58-201ENST00000295628 MYO6Q9UM54 1294 aa20.38■□□□□ 0.85
LRRC58-201ENST00000295628 ZRSR2Q15696 482 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms