RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 PTPRGP23470 1445 aa20.24■□□□□ 0.83
CAPN2-201ENST00000295006 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
CAPN2-201ENST00000295006 DHX29Q7Z478 1369 aaKnown RBP20.23■□□□□ 0.83
CAPN2-201ENST00000295006 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
CAPN2-201ENST00000295006 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
CAPN2-201ENST00000295006 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
CAPN2-201ENST00000295006 ARXQ96QS3 562 aa20.22■□□□□ 0.83
CAPN2-201ENST00000295006 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
CAPN2-201ENST00000295006 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
CAPN2-201ENST00000295006 WDR62O43379 1518 aa20.21■□□□□ 0.83
CAPN2-201ENST00000295006 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
CAPN2-201ENST00000295006 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
CAPN2-201ENST00000295006 PZPP20742 1482 aa20.19■□□□□ 0.82
CAPN2-201ENST00000295006 BRD4O60885 1362 aaPredicted RBP20.18■□□□□ 0.82
CAPN2-201ENST00000295006 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
CAPN2-201ENST00000295006 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
CAPN2-201ENST00000295006 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
CAPN2-201ENST00000295006 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
CAPN2-201ENST00000295006 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
CAPN2-201ENST00000295006 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
CAPN2-201ENST00000295006 SAFB2Q14151 953 aaKnown RBP eCLIP20.15■□□□□ 0.82
CAPN2-201ENST00000295006 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.82
CAPN2-201ENST00000295006 DISP1Q96F81 1524 aa20.14■□□□□ 0.81
CAPN2-201ENST00000295006 APAF1O14727 1248 aa20.14■□□□□ 0.81
CAPN2-201ENST00000295006 KIF3BO15066 747 aa20.14■□□□□ 0.81
CAPN2-201ENST00000295006 AFAP1Q8N556 730 aa20.14■□□□□ 0.81
CAPN2-201ENST00000295006 RRP7AQ9Y3A4 280 aaKnown RBP20.14■□□□□ 0.81
CAPN2-201ENST00000295006 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
CAPN2-201ENST00000295006 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
CAPN2-201ENST00000295006 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
CAPN2-201ENST00000295006 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
CAPN2-201ENST00000295006 CDCA8Q53HL2 280 aa20.1■□□□□ 0.81
CAPN2-201ENST00000295006 RAPGEF6Q8TEU7 1601 aa20.09■□□□□ 0.81
CAPN2-201ENST00000295006 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
CAPN2-201ENST00000295006 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.81
CAPN2-201ENST00000295006 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.81
CAPN2-201ENST00000295006 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
CAPN2-201ENST00000295006 DISP3Q9P2K9 1392 aa20.07■□□□□ 0.8
CAPN2-201ENST00000295006 KIAA0556O60303 1618 aa20.07■□□□□ 0.8
CAPN2-201ENST00000295006 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
CAPN2-201ENST00000295006 CLUAP1Q96AJ1 413 aa20.06■□□□□ 0.8
CAPN2-201ENST00000295006 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
CAPN2-201ENST00000295006 DDRGK1Q96HY6 314 aa20.06■□□□□ 0.8
CAPN2-201ENST00000295006 GGT6Q6P531 493 aa20.05■□□□□ 0.8
CAPN2-201ENST00000295006 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CAPN2-201ENST00000295006 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
CAPN2-201ENST00000295006 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
CAPN2-201ENST00000295006 PPM1GO15355 546 aaPredicted RBP20.04■□□□□ 0.8
CAPN2-201ENST00000295006 KIF14Q15058 1648 aa20.04■□□□□ 0.8
CAPN2-201ENST00000295006 PBRM1Q86U86 1689 aa20.04■□□□□ 0.8
CAPN2-201ENST00000295006 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
CAPN2-201ENST00000295006 SPRYD3Q8NCJ5 442 aa20.02■□□□□ 0.8
CAPN2-201ENST00000295006 ATP10BO94823 1461 aa20.02■□□□□ 0.8
CAPN2-201ENST00000295006 BCAR3O75815 825 aa20.01■□□□□ 0.79
CAPN2-201ENST00000295006 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
CAPN2-201ENST00000295006 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
CAPN2-201ENST00000295006 COG6Q9Y2V7 657 aa20■□□□□ 0.79
CAPN2-201ENST00000295006 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
CAPN2-201ENST00000295006 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
CAPN2-201ENST00000295006 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
CAPN2-201ENST00000295006 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
CAPN2-201ENST00000295006 ERBINQ96RT1 1412 aa19.97■□□□□ 0.79
CAPN2-201ENST00000295006 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
CAPN2-201ENST00000295006 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
CAPN2-201ENST00000295006 TESK2Q96S53 571 aa19.97■□□□□ 0.79
CAPN2-201ENST00000295006 STK26Q9P289 416 aa19.97■□□□□ 0.79
CAPN2-201ENST00000295006 PLEKHH2Q8IVE3 1493 aa19.97■□□□□ 0.79
CAPN2-201ENST00000295006 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
CAPN2-201ENST00000295006 BCORL1Q5H9F3 1711 aa19.95■□□□□ 0.78
CAPN2-201ENST00000295006 PANK1Q8TE04 598 aa19.95■□□□□ 0.78
CAPN2-201ENST00000295006 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
CAPN2-201ENST00000295006 MS4A1P11836 297 aa19.94■□□□□ 0.78
CAPN2-201ENST00000295006 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
CAPN2-201ENST00000295006 CENPQQ7L2Z9 268 aaPredicted RBP19.93■□□□□ 0.78
CAPN2-201ENST00000295006 UPF2Q9HAU5 1272 aaKnown RBP19.92■□□□□ 0.78
CAPN2-201ENST00000295006 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
CAPN2-201ENST00000295006 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
CAPN2-201ENST00000295006 U2AF1L5P0DN76 240 aaPredicted RBP19.91■□□□□ 0.78
CAPN2-201ENST00000295006 U2AF1Q01081 240 aaKnown RBP eCLIP19.91■□□□□ 0.78
CAPN2-201ENST00000295006 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
CAPN2-201ENST00000295006 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.9■□□□□ 0.78
CAPN2-201ENST00000295006 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
CAPN2-201ENST00000295006 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.77
CAPN2-201ENST00000295006 PARD3Q8TEW0 1356 aa19.89■□□□□ 0.77
CAPN2-201ENST00000295006 FTSJ3Q8IY81 847 aaKnown RBP19.89■□□□□ 0.77
CAPN2-201ENST00000295006 KANK1Q14678 1352 aa19.89■□□□□ 0.77
CAPN2-201ENST00000295006 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
CAPN2-201ENST00000295006 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
CAPN2-201ENST00000295006 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
CAPN2-201ENST00000295006 SLC12A5Q9H2X9 1139 aa19.87■□□□□ 0.77
CAPN2-201ENST00000295006 STAG3Q9UJ98 1225 aa19.87■□□□□ 0.77
CAPN2-201ENST00000295006 NFKBIBQ15653 356 aa19.86■□□□□ 0.77
CAPN2-201ENST00000295006 CFAP53Q96M91 514 aa19.86■□□□□ 0.77
CAPN2-201ENST00000295006 SPINK5Q9NQ38 1064 aaPredicted RBP19.85■□□□□ 0.77
CAPN2-201ENST00000295006 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
CAPN2-201ENST00000295006 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
CAPN2-201ENST00000295006 WASHC2CQ9Y4E1 1318 aa19.84■□□□□ 0.77
CAPN2-201ENST00000295006 KDM5CP41229 1560 aa19.83■□□□□ 0.77
CAPN2-201ENST00000295006 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.77
CAPN2-201ENST00000295006 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms