RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
PDPN-201ENST00000294489 MROH1Q8NDA8 1641 aa13.16□□□□□ -0.3
PDPN-201ENST00000294489 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
PDPN-201ENST00000294489 RNF17Q9BXT8 1623 aaKnown RBP13.15□□□□□ -0.3
PDPN-201ENST00000294489 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
PDPN-201ENST00000294489 ATP10AO60312 1499 aa13.14□□□□□ -0.31
PDPN-201ENST00000294489 PRDM15P57071 1507 aaPredicted RBP13.14□□□□□ -0.31
PDPN-201ENST00000294489 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
PDPN-201ENST00000294489 TET3O43151 1660 aa13.13□□□□□ -0.31
PDPN-201ENST00000294489 FOXD1Q16676 465 aa13.13□□□□□ -0.31
PDPN-201ENST00000294489 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
PDPN-201ENST00000294489 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
PDPN-201ENST00000294489 PKD2Q13563 968 aa13.12□□□□□ -0.31
PDPN-201ENST00000294489 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
PDPN-201ENST00000294489 E9PCH4 1651 aa13.12□□□□□ -0.31
PDPN-201ENST00000294489 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
PDPN-201ENST00000294489 LMTK2Q8IWU2 1503 aa13.09□□□□□ -0.31
PDPN-201ENST00000294489 DIP2CQ9Y2E4 1556 aa13.09□□□□□ -0.31
PDPN-201ENST00000294489 A2MP01023 1474 aa13.08□□□□□ -0.31
PDPN-201ENST00000294489 SPHKAPQ2M3C7 1700 aa13.08□□□□□ -0.32
PDPN-201ENST00000294489 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
PDPN-201ENST00000294489 UHRF1BP1Q6BDS2 1440 aa13.06□□□□□ -0.32
PDPN-201ENST00000294489 PTPRTO14522 1441 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 TRPM2O94759 1503 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 REREQ9P2R6 1566 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 CEP152O94986 1710 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
PDPN-201ENST00000294489 MIER1Q8N108 512 aa13.04□□□□□ -0.32
PDPN-201ENST00000294489 EFCAB6Q5THR3 1501 aa13.04□□□□□ -0.32
PDPN-201ENST00000294489 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.32
PDPN-201ENST00000294489 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
PDPN-201ENST00000294489 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
PDPN-201ENST00000294489 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
PDPN-201ENST00000294489 KANK1Q14678 1352 aa13□□□□□ -0.33
PDPN-201ENST00000294489 CLTCL1P53675 1640 aa13□□□□□ -0.33
PDPN-201ENST00000294489 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
PDPN-201ENST00000294489 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
PDPN-201ENST00000294489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDPN-201ENST00000294489 CAMSAP1Q5T5Y3 1602 aa12.98□□□□□ -0.33
PDPN-201ENST00000294489 RALGAPBQ86X10 1494 aa12.98□□□□□ -0.33
PDPN-201ENST00000294489 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
PDPN-201ENST00000294489 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
PDPN-201ENST00000294489 ABCC3O15438 1527 aa12.98□□□□□ -0.33
PDPN-201ENST00000294489 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
PDPN-201ENST00000294489 LAMC1P11047 1609 aa12.97□□□□□ -0.33
PDPN-201ENST00000294489 KIF3BO15066 747 aa12.97□□□□□ -0.33
PDPN-201ENST00000294489 AGLP35573 1532 aa12.97□□□□□ -0.33
PDPN-201ENST00000294489 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
PDPN-201ENST00000294489 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
PDPN-201ENST00000294489 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
PDPN-201ENST00000294489 KIF1BO60333 1816 aa12.94□□□□□ -0.34
PDPN-201ENST00000294489 SIGLEC1Q9BZZ2 1709 aa12.94□□□□□ -0.34
PDPN-201ENST00000294489 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
PDPN-201ENST00000294489 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
PDPN-201ENST00000294489 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
PDPN-201ENST00000294489 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
PDPN-201ENST00000294489 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
PDPN-201ENST00000294489 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
PDPN-201ENST00000294489 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
PDPN-201ENST00000294489 NPATQ14207 1427 aa12.9□□□□□ -0.34
PDPN-201ENST00000294489 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
PDPN-201ENST00000294489 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
PDPN-201ENST00000294489 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
PDPN-201ENST00000294489 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
PDPN-201ENST00000294489 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
PDPN-201ENST00000294489 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
PDPN-201ENST00000294489 HSPA5P11021 654 aaKnown RBP12.89□□□□□ -0.35
PDPN-201ENST00000294489 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
PDPN-201ENST00000294489 NOS1P29475 1434 aa12.89□□□□□ -0.35
PDPN-201ENST00000294489 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDPN-201ENST00000294489 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
PDPN-201ENST00000294489 SYNMO15061 1565 aa12.88□□□□□ -0.35
PDPN-201ENST00000294489 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
PDPN-201ENST00000294489 MYOM2P54296 1465 aa12.87□□□□□ -0.35
PDPN-201ENST00000294489 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
PDPN-201ENST00000294489 PPLO60437 1756 aa12.86□□□□□ -0.35
PDPN-201ENST00000294489 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
PDPN-201ENST00000294489 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
PDPN-201ENST00000294489 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
PDPN-201ENST00000294489 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
PDPN-201ENST00000294489 USP47Q96K76 1375 aa12.83□□□□□ -0.36
PDPN-201ENST00000294489 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
PDPN-201ENST00000294489 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
PDPN-201ENST00000294489 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
PDPN-201ENST00000294489 GGT6Q6P531 493 aa12.82□□□□□ -0.36
PDPN-201ENST00000294489 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
PDPN-201ENST00000294489 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
PDPN-201ENST00000294489 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
PDPN-201ENST00000294489 SPATA31D1Q6ZQQ2 1576 aa12.8□□□□□ -0.36
PDPN-201ENST00000294489 ANP32CO43423 234 aa12.79□□□□□ -0.36
PDPN-201ENST00000294489 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
PDPN-201ENST00000294489 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
PDPN-201ENST00000294489 RGL3Q3MIN7 710 aa12.79□□□□□ -0.36
PDPN-201ENST00000294489 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
PDPN-201ENST00000294489 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
PDPN-201ENST00000294489 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
PDPN-201ENST00000294489 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
PDPN-201ENST00000294489 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
PDPN-201ENST00000294489 MYO5BQ9ULV0 1848 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms