RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 RNF123Q5XPI4 1314 aa22.78■■□□□ 1.24
CHRNE-201ENST00000293780 SHROOM2Q13796 1616 aa22.76■■□□□ 1.23
CHRNE-201ENST00000293780 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
CHRNE-201ENST00000293780 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
CHRNE-201ENST00000293780 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
CHRNE-201ENST00000293780 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
CHRNE-201ENST00000293780 SAMD9LQ8IVG5 1584 aa22.72■■□□□ 1.23
CHRNE-201ENST00000293780 MYBBP1AQ9BQG0 1328 aaKnown RBP22.72■■□□□ 1.23
CHRNE-201ENST00000293780 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
CHRNE-201ENST00000293780 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
CHRNE-201ENST00000293780 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.23
CHRNE-201ENST00000293780 NBPF1Q3BBV0 1214 aa22.7■■□□□ 1.22
CHRNE-201ENST00000293780 CDC42BPBQ9Y5S2 1711 aa22.7■■□□□ 1.22
CHRNE-201ENST00000293780 RALBP1Q15311 655 aa22.7■■□□□ 1.22
CHRNE-201ENST00000293780 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.22
CHRNE-201ENST00000293780 BRD4O60885 1362 aaPredicted RBP22.69■■□□□ 1.22
CHRNE-201ENST00000293780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNE-201ENST00000293780 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
CHRNE-201ENST00000293780 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
CHRNE-201ENST00000293780 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
CHRNE-201ENST00000293780 CCDC144AA2RUR9 1427 aa22.66■■□□□ 1.22
CHRNE-201ENST00000293780 E9PCH4 1651 aa22.65■■□□□ 1.22
CHRNE-201ENST00000293780 PREX2Q70Z35 1606 aa22.64■■□□□ 1.21
CHRNE-201ENST00000293780 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.21
CHRNE-201ENST00000293780 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
CHRNE-201ENST00000293780 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
CHRNE-201ENST00000293780 TRPM1Q7Z4N2 1603 aa22.62■■□□□ 1.21
CHRNE-201ENST00000293780 SYCP2Q9BX26 1530 aa22.62■■□□□ 1.21
CHRNE-201ENST00000293780 PER1O15534 1290 aaPredicted RBP22.6■■□□□ 1.21
CHRNE-201ENST00000293780 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
CHRNE-201ENST00000293780 PARD3Q8TEW0 1356 aa22.59■■□□□ 1.21
CHRNE-201ENST00000293780 A2MP01023 1474 aa22.58■■□□□ 1.21
CHRNE-201ENST00000293780 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
CHRNE-201ENST00000293780 TTC37Q6PGP7 1564 aa22.57■■□□□ 1.2
CHRNE-201ENST00000293780 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
CHRNE-201ENST00000293780 RRP1P56182 461 aaKnown RBP22.56■■□□□ 1.2
CHRNE-201ENST00000293780 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
CHRNE-201ENST00000293780 TESK2Q96S53 571 aa22.55■■□□□ 1.2
CHRNE-201ENST00000293780 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
CHRNE-201ENST00000293780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.2
CHRNE-201ENST00000293780 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
CHRNE-201ENST00000293780 UNC13BO14795 1591 aa22.54■■□□□ 1.2
CHRNE-201ENST00000293780 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
CHRNE-201ENST00000293780 RCAN3Q9UKA8 241 aa22.53■■□□□ 1.2
CHRNE-201ENST00000293780 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
CHRNE-201ENST00000293780 CDCA7LQ96GN5 454 aa22.52■■□□□ 1.2
CHRNE-201ENST00000293780 PANK3Q9H999 370 aa22.52■■□□□ 1.2
CHRNE-201ENST00000293780 MAST1Q9Y2H9 1570 aa22.51■■□□□ 1.19
CHRNE-201ENST00000293780 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
CHRNE-201ENST00000293780 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
CHRNE-201ENST00000293780 PRDM15P57071 1507 aaPredicted RBP22.48■■□□□ 1.19
CHRNE-201ENST00000293780 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
CHRNE-201ENST00000293780 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
CHRNE-201ENST00000293780 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
CHRNE-201ENST00000293780 ABCC2Q92887 1545 aa22.45■■□□□ 1.18
CHRNE-201ENST00000293780 PDE3BQ13370 1112 aa22.45■■□□□ 1.18
CHRNE-201ENST00000293780 PLXNC1O60486 1568 aa22.44■■□□□ 1.18
CHRNE-201ENST00000293780 TMF1P82094 1093 aa22.43■■□□□ 1.18
CHRNE-201ENST00000293780 LAMC1P11047 1609 aa22.42■■□□□ 1.18
CHRNE-201ENST00000293780 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
CHRNE-201ENST00000293780 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
CHRNE-201ENST00000293780 PLIN1O60240 522 aa22.41■■□□□ 1.18
CHRNE-201ENST00000293780 ANP32AP39687 249 aaKnown RBP22.4■■□□□ 1.18
CHRNE-201ENST00000293780 IPO9Q96P70 1041 aaKnown RBP22.4■■□□□ 1.18
CHRNE-201ENST00000293780 ATP10AO60312 1499 aa22.39■■□□□ 1.17
CHRNE-201ENST00000293780 NBR1Q14596 966 aa22.38■■□□□ 1.17
CHRNE-201ENST00000293780 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
CHRNE-201ENST00000293780 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
CHRNE-201ENST00000293780 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
CHRNE-201ENST00000293780 PLCH2O75038 1416 aa22.35■■□□□ 1.17
CHRNE-201ENST00000293780 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
CHRNE-201ENST00000293780 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
CHRNE-201ENST00000293780 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
CHRNE-201ENST00000293780 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
CHRNE-201ENST00000293780 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.16
CHRNE-201ENST00000293780 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
CHRNE-201ENST00000293780 TCERG1O14776 1098 aaKnown RBP22.31■■□□□ 1.16
CHRNE-201ENST00000293780 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
CHRNE-201ENST00000293780 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
CHRNE-201ENST00000293780 RNF17Q9BXT8 1623 aaKnown RBP22.3■■□□□ 1.16
CHRNE-201ENST00000293780 AFAP1Q8N556 730 aa22.3■■□□□ 1.16
CHRNE-201ENST00000293780 CRBNQ96SW2 442 aa22.3■■□□□ 1.16
CHRNE-201ENST00000293780 WDR7Q9Y4E6 1490 aa22.3■■□□□ 1.16
CHRNE-201ENST00000293780 INSRP06213 1382 aa22.3■■□□□ 1.16
CHRNE-201ENST00000293780 DEKP35659 375 aaKnown RBP22.3■■□□□ 1.16
CHRNE-201ENST00000293780 PDE4AP27815 886 aa22.29■■□□□ 1.16
CHRNE-201ENST00000293780 KNSTRNQ9Y448 316 aa22.29■■□□□ 1.16
CHRNE-201ENST00000293780 SKAP1Q86WV1 359 aa22.29■■□□□ 1.16
CHRNE-201ENST00000293780 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
CHRNE-201ENST00000293780 ABCC1P33527 1531 aa22.26■■□□□ 1.15
CHRNE-201ENST00000293780 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
CHRNE-201ENST00000293780 AMER1Q5JTC6 1135 aaPredicted RBP22.26■■□□□ 1.15
CHRNE-201ENST00000293780 C20orf194Q5TEA3 1177 aa22.26■■□□□ 1.15
CHRNE-201ENST00000293780 MADDQ8WXG6 1647 aa22.26■■□□□ 1.15
CHRNE-201ENST00000293780 SPAG9O60271 1321 aaKnown RBP22.26■■□□□ 1.15
CHRNE-201ENST00000293780 BACH2Q9BYV9 841 aa22.24■■□□□ 1.15
CHRNE-201ENST00000293780 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
CHRNE-201ENST00000293780 IQGAP1P46940 1657 aa22.22■■□□□ 1.15
CHRNE-201ENST00000293780 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHRNE-201ENST00000293780 MS4A1P11836 297 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms