RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 APAF1O14727 1248 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 DDRGK1Q96HY6 314 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 AKNAQ7Z591 1439 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 MSH5O43196 834 aa6.16□□□□□ -1.42
UBR1-201ENST00000290650 SNAPC4Q5SXM2 1469 aa6.15□□□□□ -1.42
UBR1-201ENST00000290650 MYBBP1AQ9BQG0 1328 aaKnown RBP6.15□□□□□ -1.42
UBR1-201ENST00000290650 SUPT6HQ7KZ85 1726 aaKnown RBP6.15□□□□□ -1.42
UBR1-201ENST00000290650 HAP1P54257 671 aaPredicted RBP6.15□□□□□ -1.43
UBR1-201ENST00000290650 BECN1Q14457 450 aa6.15□□□□□ -1.43
UBR1-201ENST00000290650 GOLGA2Q08379 1002 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 ARHGAP5Q13017 1502 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 ANKRD50Q9ULJ7 1429 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 HMGXB3Q12766 1538 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 SMC4Q9NTJ3 1288 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 COG6Q9Y2V7 657 aa6.14□□□□□ -1.43
UBR1-201ENST00000290650 ZNF428Q96B54 188 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 CFAP65Q6ZU64 1925 aaKnown RBP6.13□□□□□ -1.43
UBR1-201ENST00000290650 ZBED9Q6R2W3 1325 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 DNMBPQ6XZF7 1577 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 MFAP1P55081 439 aaKnown RBP6.13□□□□□ -1.43
UBR1-201ENST00000290650 RRP1P56182 461 aaKnown RBP6.13□□□□□ -1.43
UBR1-201ENST00000290650 ANP32BQ92688 251 aaKnown RBP6.13□□□□□ -1.43
UBR1-201ENST00000290650 NECTIN2Q92692 538 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 CNTLNQ9NXG0 1405 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 CABP2Q9NPB3 220 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 GRIN2BQ13224 1484 aa6.13□□□□□ -1.43
UBR1-201ENST00000290650 HSP90AB1P08238 724 aaKnown RBP6.12□□□□□ -1.43
UBR1-201ENST00000290650 CFAP70Q5T0N1 1121 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 PTPN23Q9H3S7 1636 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 ADAMTS8Q9UP79 889 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 PLB1Q6P1J6 1458 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 SLC4A10Q6U841 1118 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 BIVM-ERCC5R4GMW8 1640 aa6.12□□□□□ -1.43
UBR1-201ENST00000290650 NOL8Q76FK4 1167 aaKnown RBP6.12□□□□□ -1.43
UBR1-201ENST00000290650 HDGFL2Q7Z4V5 671 aaPredicted RBP6.12□□□□□ -1.43
UBR1-201ENST00000290650 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.12□□□□□ -1.43
UBR1-201ENST00000290650 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 ZNF608Q9ULD9 1512 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 FANCIQ9NVI1 1328 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 NAIPQ13075 1403 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 HMOX1P09601 288 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 OS9Q13438 667 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 NUTM2GQ5VZR2 741 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 URB2Q14146 1524 aaKnown RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 EPRSP07814 1512 aaKnown RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 FOXD4L5Q5VV16 416 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 GGNBP2Q9H3C7 697 aa6.11□□□□□ -1.43
UBR1-201ENST00000290650 CENPJQ9HC77 1338 aaPredicted RBP6.11□□□□□ -1.43
UBR1-201ENST00000290650 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 PLCB2Q00722 1185 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 EHBP1L1Q8N3D4 1523 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 DAPK1P53355 1430 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 PDE4AP27815 886 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 AMER1Q5JTC6 1135 aaPredicted RBP6.1□□□□□ -1.43
UBR1-201ENST00000290650 HECW1Q76N89 1606 aa6.1□□□□□ -1.43
UBR1-201ENST00000290650 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
UBR1-201ENST00000290650 NAP1L2Q9ULW6 460 aaPredicted RBP6.1□□□□□ -1.43
UBR1-201ENST00000290650 MRC2Q9UBG0 1479 aa6.09□□□□□ -1.43
UBR1-201ENST00000290650 CCDC9Q9Y3X0 531 aaKnown RBP6.09□□□□□ -1.43
UBR1-201ENST00000290650 C9orf84Q5VXU9 1444 aa6.09□□□□□ -1.43
UBR1-201ENST00000290650 THOC2Q8NI27 1593 aaKnown RBP6.09□□□□□ -1.43
UBR1-201ENST00000290650 HFM1A2PYH4 1435 aa6.09□□□□□ -1.43
UBR1-201ENST00000290650 PTPRKQ15262 1439 aa6.09□□□□□ -1.43
UBR1-201ENST00000290650 EIF3AQ14152 1382 aaKnown RBP6.09□□□□□ -1.43
UBR1-201ENST00000290650 FOXD4L6Q3SYB3 417 aaPredicted RBP6.09□□□□□ -1.44
UBR1-201ENST00000290650 ERICH6BQ5W0A0 696 aa6.09□□□□□ -1.44
UBR1-201ENST00000290650 FOXD4L3Q6VB84 417 aaPredicted RBP6.09□□□□□ -1.44
UBR1-201ENST00000290650 RTF1Q92541 710 aaKnown RBP6.09□□□□□ -1.44
UBR1-201ENST00000290650 IQGAP2Q13576 1575 aa6.09□□□□□ -1.44
UBR1-201ENST00000290650 EFCAB5A4FU69 1503 aa6.08□□□□□ -1.44
UBR1-201ENST00000290650 RAPGEF3O95398 923 aa6.08□□□□□ -1.44
UBR1-201ENST00000290650 SLC12A5Q9H2X9 1139 aa6.08□□□□□ -1.44
UBR1-201ENST00000290650 NGDNQ8NEJ9 315 aaKnown RBP6.08□□□□□ -1.44
UBR1-201ENST00000290650 BCAR3O75815 825 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 FAM69CQ0P6D2 419 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 MAPKBP1O60336 1514 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 ABCA10Q8WWZ4 1543 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 RSPH4AQ5TD94 716 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 TRIM44Q96DX7 344 aaPredicted RBP6.07□□□□□ -1.44
UBR1-201ENST00000290650 HSCBQ8IWL3 235 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 ARID3AQ99856 593 aa6.07□□□□□ -1.44
UBR1-201ENST00000290650 SCAPERQ9BY12 1400 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 CASC1Q6TDU7 716 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 TERF2IPQ9NYB0 399 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 KIF21AQ7Z4S6 1674 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 PEG3Q9GZU2 1588 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 MTHFSP49914 203 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 KCNJ4P48050 445 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 NGEFQ8N5V2 710 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 CUL7Q14999 1698 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 CTTNBP2Q8WZ74 1663 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
UBR1-201ENST00000290650 OSCARQ8IYS5 282 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 CAMSAP2Q08AD1 1489 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 KIAA1107Q9UPP5 1409 aa6.06□□□□□ -1.44
UBR1-201ENST00000290650 AMPHP49418 695 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 RIPK4P57078 832 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms