RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 UHRF1BP1Q6BDS2 1440 aa26.82■■□□□ 1.88
BRAF-201ENST00000288602 CARD11Q9BXL7 1154 aa26.81■■□□□ 1.88
BRAF-201ENST00000288602 IQGAP3Q86VI3 1631 aa26.81■■□□□ 1.88
BRAF-201ENST00000288602 MYT1LQ9UL68 1186 aa26.79■■□□□ 1.88
BRAF-201ENST00000288602 ARAP3Q8WWN8 1544 aa26.79■■□□□ 1.88
BRAF-201ENST00000288602 BCORL1Q5H9F3 1711 aa26.78■■□□□ 1.88
BRAF-201ENST00000288602 ABCA9Q8IUA7 1624 aa26.78■■□□□ 1.88
BRAF-201ENST00000288602 KDM5CP41229 1560 aa26.78■■□□□ 1.88
BRAF-201ENST00000288602 RALGAPBQ86X10 1494 aa26.77■■□□□ 1.88
BRAF-201ENST00000288602 ZFYVE16Q7Z3T8 1539 aa26.76■■□□□ 1.87
BRAF-201ENST00000288602 NPM1P06748 294 aaKnown RBP eCLIP26.75■■□□□ 1.87
BRAF-201ENST00000288602 MAGI2Q86UL8 1455 aa26.75■■□□□ 1.87
BRAF-201ENST00000288602 POLR1AO95602 1720 aaPredicted RBP26.74■■□□□ 1.87
BRAF-201ENST00000288602 CCDC184Q52MB2 194 aa26.74■■□□□ 1.87
BRAF-201ENST00000288602 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
BRAF-201ENST00000288602 ADGRL1O94910 1474 aa26.73■■□□□ 1.87
BRAF-201ENST00000288602 CNGB1Q14028 1251 aaPredicted RBP26.73■■□□□ 1.87
BRAF-201ENST00000288602 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
BRAF-201ENST00000288602 PRKRIP1Q9H875 184 aaPredicted RBP26.72■■□□□ 1.87
BRAF-201ENST00000288602 ST20-MTHFSA0A0A6YYL1 179 aa26.7■■□□□ 1.86
BRAF-201ENST00000288602 ROCK2O75116 1388 aaKnown RBP26.7■■□□□ 1.86
BRAF-201ENST00000288602 ATP7AQ04656 1500 aa26.68■■□□□ 1.86
BRAF-201ENST00000288602 NBPF1Q3BBV0 1214 aa26.67■■□□□ 1.86
BRAF-201ENST00000288602 A2MP01023 1474 aa26.67■■□□□ 1.86
BRAF-201ENST00000288602 PRAG1Q86YV5 1406 aa26.66■■□□□ 1.86
BRAF-201ENST00000288602 SUPT16HQ9Y5B9 1047 aaKnown RBP26.66■■□□□ 1.86
BRAF-201ENST00000288602 KIF3BO15066 747 aa26.64■■□□□ 1.86
BRAF-201ENST00000288602 INO80Q9ULG1 1556 aaPredicted RBP26.63■■□□□ 1.85
BRAF-201ENST00000288602 E9PCH4 1651 aa26.61■■□□□ 1.85
BRAF-201ENST00000288602 HNRNPUQ00839 825 aaKnown RBP eCLIP26.61■■□□□ 1.85
BRAF-201ENST00000288602 ATP10AO60312 1499 aa26.61■■□□□ 1.85
BRAF-201ENST00000288602 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
BRAF-201ENST00000288602 MRS2Q9HD23 443 aa26.58■■□□□ 1.85
BRAF-201ENST00000288602 DHX29Q7Z478 1369 aaKnown RBP26.57■■□□□ 1.84
BRAF-201ENST00000288602 CD109Q6YHK3 1445 aa26.57■■□□□ 1.84
BRAF-201ENST00000288602 FAM9BQ8IZU0 186 aa26.57■■□□□ 1.84
BRAF-201ENST00000288602 DEPDC5O75140 1603 aa26.55■■□□□ 1.84
BRAF-201ENST00000288602 ARID4BQ4LE39 1312 aaPredicted RBP26.54■■□□□ 1.84
BRAF-201ENST00000288602 KIDINS220Q9ULH0 1771 aa26.52■■□□□ 1.84
BRAF-201ENST00000288602 KANK1Q14678 1352 aa26.52■■□□□ 1.84
BRAF-201ENST00000288602 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
BRAF-201ENST00000288602 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
BRAF-201ENST00000288602 TRPM2O94759 1503 aa26.47■■□□□ 1.83
BRAF-201ENST00000288602 TET3O43151 1660 aa26.47■■□□□ 1.83
BRAF-201ENST00000288602 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
BRAF-201ENST00000288602 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
BRAF-201ENST00000288602 MROH1Q8NDA8 1641 aa26.46■■□□□ 1.83
BRAF-201ENST00000288602 PTPRTO14522 1441 aa26.46■■□□□ 1.83
BRAF-201ENST00000288602 FKBP8Q14318 412 aa26.45■■□□□ 1.83
BRAF-201ENST00000288602 VWDEQ8N2E2 1590 aa26.45■■□□□ 1.83
BRAF-201ENST00000288602 CYB5RLQ6IPT4 315 aa26.45■■□□□ 1.82
BRAF-201ENST00000288602 BCANQ96GW7 911 aa26.44■■□□□ 1.82
BRAF-201ENST00000288602 PRDM15P57071 1507 aaPredicted RBP26.42■■□□□ 1.82
BRAF-201ENST00000288602 EIF2AK4Q9P2K8 1649 aaKnown RBP26.42■■□□□ 1.82
BRAF-201ENST00000288602 RAPGEF3O95398 923 aa26.42■■□□□ 1.82
BRAF-201ENST00000288602 POGZQ7Z3K3 1410 aa26.42■■□□□ 1.82
BRAF-201ENST00000288602 CEP152O94986 1710 aa26.4■■□□□ 1.82
BRAF-201ENST00000288602 UGGT1Q9NYU2 1555 aa26.4■■□□□ 1.82
BRAF-201ENST00000288602 TESK2Q96S53 571 aa26.4■■□□□ 1.82
BRAF-201ENST00000288602 GGT6Q6P531 493 aa26.39■■□□□ 1.81
BRAF-201ENST00000288602 DISP3Q9P2K9 1392 aa26.38■■□□□ 1.81
BRAF-201ENST00000288602 CFAP74Q9C0B2 1584 aa26.37■■□□□ 1.81
BRAF-201ENST00000288602 LAMC1P11047 1609 aa26.35■■□□□ 1.81
BRAF-201ENST00000288602 MADDQ8WXG6 1647 aa26.35■■□□□ 1.81
BRAF-201ENST00000288602 PPRC1Q5VV67 1664 aaKnown RBP26.32■■□□□ 1.8
BRAF-201ENST00000288602 FRMPD1Q5SYB0 1578 aa26.32■■□□□ 1.8
BRAF-201ENST00000288602 MLH3Q9UHC1 1453 aa26.32■■□□□ 1.8
BRAF-201ENST00000288602 HECW2Q9P2P5 1572 aa26.32■■□□□ 1.8
BRAF-201ENST00000288602 EFCAB6Q5THR3 1501 aa26.32■■□□□ 1.8
BRAF-201ENST00000288602 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
BRAF-201ENST00000288602 CFAP65Q6ZU64 1925 aaKnown RBP26.31■■□□□ 1.8
BRAF-201ENST00000288602 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
BRAF-201ENST00000288602 NEFLP07196 543 aa26.31■■□□□ 1.8
BRAF-201ENST00000288602 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
BRAF-201ENST00000288602 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
BRAF-201ENST00000288602 TMF1P82094 1093 aa26.27■■□□□ 1.8
BRAF-201ENST00000288602 TMC1Q8TDI8 760 aa26.27■■□□□ 1.8
BRAF-201ENST00000288602 CHGAP10645 457 aaKnown RBP26.26■■□□□ 1.79
BRAF-201ENST00000288602 NEO1Q92859 1461 aa26.25■■□□□ 1.79
BRAF-201ENST00000288602 ADGRF5Q8IZF2 1346 aa26.24■■□□□ 1.79
BRAF-201ENST00000288602 PER1O15534 1290 aaPredicted RBP26.24■■□□□ 1.79
BRAF-201ENST00000288602 ZBED9Q6R2W3 1325 aa26.24■■□□□ 1.79
BRAF-201ENST00000288602 WASHC2CQ9Y4E1 1318 aa26.24■■□□□ 1.79
BRAF-201ENST00000288602 PANK3Q9H999 370 aa26.24■■□□□ 1.79
BRAF-201ENST00000288602 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
BRAF-201ENST00000288602 MYT1Q01538 1121 aa26.23■■□□□ 1.79
BRAF-201ENST00000288602 NPATQ14207 1427 aa26.22■■□□□ 1.79
BRAF-201ENST00000288602 LMTK2Q8IWU2 1503 aa26.22■■□□□ 1.79
BRAF-201ENST00000288602 KIF1BO60333 1816 aa26.22■■□□□ 1.79
BRAF-201ENST00000288602 IRX6P78412 446 aaPredicted RBP26.22■■□□□ 1.79
BRAF-201ENST00000288602 PNISRQ8TF01 805 aaKnown RBP26.22■■□□□ 1.79
BRAF-201ENST00000288602 MYBBP1AQ9BQG0 1328 aaKnown RBP26.21■■□□□ 1.79
BRAF-201ENST00000288602 RALBP1Q15311 655 aa26.21■■□□□ 1.79
BRAF-201ENST00000288602 STAC3Q96MF2 364 aa26.21■■□□□ 1.79
BRAF-201ENST00000288602 MROH2AA6NES4 1674 aa26.2■■□□□ 1.79
BRAF-201ENST00000288602 IQGAP1P46940 1657 aa26.2■■□□□ 1.79
BRAF-201ENST00000288602 CC2D1BQ5T0F9 858 aaKnown RBP26.2■■□□□ 1.78
BRAF-201ENST00000288602 RIMBP3CA6NJZ7 1639 aa26.2■■□□□ 1.78
BRAF-201ENST00000288602 RIMBP3BA6NNM3 1639 aa26.2■■□□□ 1.78
BRAF-201ENST00000288602 RIMBP3Q9UFD9 1639 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms