RNA–Protein interactions for RNA: ENST00000287844.6

ABCF2-202, Transcript of ATP binding cassette subfamily F member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCF2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-202ENST00000287844 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
ABCF2-202ENST00000287844 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
ABCF2-202ENST00000287844 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
ABCF2-202ENST00000287844 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
ABCF2-202ENST00000287844 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
ABCF2-202ENST00000287844 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
ABCF2-202ENST00000287844 FAM13BQ9NYF5 915 aa11.21□□□□□ -0.61
ABCF2-202ENST00000287844 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
ABCF2-202ENST00000287844 RIPK4P57078 832 aa11.21□□□□□ -0.62
ABCF2-202ENST00000287844 BECN1Q14457 450 aa11.21□□□□□ -0.62
ABCF2-202ENST00000287844 CRBNQ96SW2 442 aa11.2□□□□□ -0.62
ABCF2-202ENST00000287844 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
ABCF2-202ENST00000287844 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
ABCF2-202ENST00000287844 FHOD3Q2V2M9 1422 aa11.19□□□□□ -0.62
ABCF2-202ENST00000287844 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
ABCF2-202ENST00000287844 IPO4Q8TEX9 1081 aaKnown RBP11.19□□□□□ -0.62
ABCF2-202ENST00000287844 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
ABCF2-202ENST00000287844 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
ABCF2-202ENST00000287844 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
ABCF2-202ENST00000287844 PLIN1O60240 522 aa11.18□□□□□ -0.62
ABCF2-202ENST00000287844 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
ABCF2-202ENST00000287844 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
ABCF2-202ENST00000287844 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
ABCF2-202ENST00000287844 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
ABCF2-202ENST00000287844 CENPQQ7L2Z9 268 aaPredicted RBP11.17□□□□□ -0.62
ABCF2-202ENST00000287844 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
ABCF2-202ENST00000287844 TERF1P54274 439 aa11.17□□□□□ -0.62
ABCF2-202ENST00000287844 CCDC18Q5T9S5 1454 aa11.17□□□□□ -0.62
ABCF2-202ENST00000287844 FYCO1Q9BQS8 1478 aa11.17□□□□□ -0.62
ABCF2-202ENST00000287844 DMTNQ08495 405 aa11.16□□□□□ -0.62
ABCF2-202ENST00000287844 OFD1O75665 1012 aa11.16□□□□□ -0.62
ABCF2-202ENST00000287844 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
ABCF2-202ENST00000287844 MCM4P33991 863 aa11.15□□□□□ -0.62
ABCF2-202ENST00000287844 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
ABCF2-202ENST00000287844 MTERF4Q7Z6M4 381 aaKnown RBP11.15□□□□□ -0.62
ABCF2-202ENST00000287844 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.623e-6■■■■□ 24.7
ABCF2-202ENST00000287844 IGSF3O75054 1194 aa11.15□□□□□ -0.62
ABCF2-202ENST00000287844 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
ABCF2-202ENST00000287844 ZNF777Q9ULD5 760 aaPredicted RBP11.15□□□□□ -0.62
ABCF2-202ENST00000287844 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.63
ABCF2-202ENST00000287844 TDRD9Q8NDG6 1382 aaKnown RBP11.15□□□□□ -0.63
ABCF2-202ENST00000287844 LRRIQ1Q96JM4 1722 aa11.14□□□□□ -0.63
ABCF2-202ENST00000287844 TRAK2O60296 914 aa11.14□□□□□ -0.63
ABCF2-202ENST00000287844 ISY1Q9ULR0 285 aaKnown RBP11.14□□□□□ -0.63
ABCF2-202ENST00000287844 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
ABCF2-202ENST00000287844 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
ABCF2-202ENST00000287844 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
ABCF2-202ENST00000287844 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
ABCF2-202ENST00000287844 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
ABCF2-202ENST00000287844 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
ABCF2-202ENST00000287844 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
ABCF2-202ENST00000287844 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
ABCF2-202ENST00000287844 PPP4R3BQ5MIZ7 849 aa11.13□□□□□ -0.63
ABCF2-202ENST00000287844 USP19O94966 1318 aa11.12□□□□□ -0.63
ABCF2-202ENST00000287844 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
ABCF2-202ENST00000287844 R3HCC1Q9Y3T6 440 aaKnown RBP11.11□□□□□ -0.63
ABCF2-202ENST00000287844 MYOM3Q5VTT5 1437 aa11.11□□□□□ -0.63
ABCF2-202ENST00000287844 LRPPRCP42704 1394 aaKnown RBP11.11□□□□□ -0.63
ABCF2-202ENST00000287844 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
ABCF2-202ENST00000287844 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
ABCF2-202ENST00000287844 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
ABCF2-202ENST00000287844 MSNP26038 577 aaKnown RBP11.1□□□□□ -0.63
ABCF2-202ENST00000287844 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
ABCF2-202ENST00000287844 UQCRHLA0A096LP55 91 aa11.09□□□□□ -0.63
ABCF2-202ENST00000287844 UQCRHP07919 91 aa11.09□□□□□ -0.63
ABCF2-202ENST00000287844 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
ABCF2-202ENST00000287844 C20orf194Q5TEA3 1177 aa11.09□□□□□ -0.63
ABCF2-202ENST00000287844 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
ABCF2-202ENST00000287844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.08□□□□□ -0.63
ABCF2-202ENST00000287844 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
ABCF2-202ENST00000287844 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
ABCF2-202ENST00000287844 HFM1A2PYH4 1435 aa11.08□□□□□ -0.64
ABCF2-202ENST00000287844 KIF20AO95235 890 aa11.08□□□□□ -0.64
ABCF2-202ENST00000287844 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
ABCF2-202ENST00000287844 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
ABCF2-202ENST00000287844 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 ZNF830Q96NB3 372 aaPredicted RBP11.06□□□□□ -0.64
ABCF2-202ENST00000287844 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 ZBTB7CA1YPR0 619 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
ABCF2-202ENST00000287844 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
ABCF2-202ENST00000287844 SEC24BO95487 1268 aa11.05□□□□□ -0.64
ABCF2-202ENST00000287844 SPATA31E1Q6ZUB1 1445 aa11.05□□□□□ -0.64
ABCF2-202ENST00000287844 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
ABCF2-202ENST00000287844 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
ABCF2-202ENST00000287844 GAS2L3Q86XJ1 694 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
ABCF2-202ENST00000287844 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
ABCF2-202ENST00000287844 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 PTPN23Q9H3S7 1636 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 LETM1O95202 739 aaPredicted RBP11.04□□□□□ -0.64
ABCF2-202ENST00000287844 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
ABCF2-202ENST00000287844 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
ABCF2-202ENST00000287844 PPP1R9BQ96SB3 815 aa11.03□□□□□ -0.64
ABCF2-202ENST00000287844 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
ABCF2-202ENST00000287844 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms