RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 ASXL2Q76L83 1435 aa17.56■□□□□ 0.4
ZIC3-201ENST00000287538 ARHGEF12Q9NZN5 1544 aa17.55■□□□□ 0.4
ZIC3-201ENST00000287538 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
ZIC3-201ENST00000287538 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
ZIC3-201ENST00000287538 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
ZIC3-201ENST00000287538 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
ZIC3-201ENST00000287538 ZCCHC11Q5TAX3 1644 aaKnown RBP17.53■□□□□ 0.4
ZIC3-201ENST00000287538 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
ZIC3-201ENST00000287538 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
ZIC3-201ENST00000287538 CCDC7Q96M83 1385 aa17.52■□□□□ 0.4
ZIC3-201ENST00000287538 DEKP35659 375 aaKnown RBP17.52■□□□□ 0.4
ZIC3-201ENST00000287538 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
ZIC3-201ENST00000287538 SHROOM2Q13796 1616 aa17.52■□□□□ 0.39
ZIC3-201ENST00000287538 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
ZIC3-201ENST00000287538 FANCAO15360 1455 aa17.51■□□□□ 0.39
ZIC3-201ENST00000287538 MLECQ14165 292 aa17.51■□□□□ 0.39
ZIC3-201ENST00000287538 KDM5BQ9UGL1 1544 aa17.49■□□□□ 0.39
ZIC3-201ENST00000287538 WDR7Q9Y4E6 1490 aa17.49■□□□□ 0.39
ZIC3-201ENST00000287538 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
ZIC3-201ENST00000287538 TEX14Q8IWB6 1497 aa17.48■□□□□ 0.39
ZIC3-201ENST00000287538 ADGBQ8N7X0 1667 aa17.47■□□□□ 0.39
ZIC3-201ENST00000287538 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
ZIC3-201ENST00000287538 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
ZIC3-201ENST00000287538 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
ZIC3-201ENST00000287538 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
ZIC3-201ENST00000287538 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
ZIC3-201ENST00000287538 FAM135AQ9P2D6 1515 aa17.45■□□□□ 0.38
ZIC3-201ENST00000287538 CD109Q6YHK3 1445 aa17.45■□□□□ 0.38
ZIC3-201ENST00000287538 KANK1Q14678 1352 aa17.44■□□□□ 0.38
ZIC3-201ENST00000287538 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
ZIC3-201ENST00000287538 CC2D1BQ5T0F9 858 aaKnown RBP17.44■□□□□ 0.38
ZIC3-201ENST00000287538 WASHC2CQ9Y4E1 1318 aa17.43■□□□□ 0.38
ZIC3-201ENST00000287538 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
ZIC3-201ENST00000287538 CROCC2H7BZ55 1655 aa17.41■□□□□ 0.38
ZIC3-201ENST00000287538 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
ZIC3-201ENST00000287538 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
ZIC3-201ENST00000287538 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
ZIC3-201ENST00000287538 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
ZIC3-201ENST00000287538 CFAP65Q6ZU64 1925 aaKnown RBP17.38■□□□□ 0.37
ZIC3-201ENST00000287538 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
ZIC3-201ENST00000287538 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
ZIC3-201ENST00000287538 NBR1Q14596 966 aa17.36■□□□□ 0.37
ZIC3-201ENST00000287538 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
ZIC3-201ENST00000287538 DUOX2Q9NRD8 1548 aa17.34■□□□□ 0.37
ZIC3-201ENST00000287538 PLA2R1Q13018 1463 aa17.34■□□□□ 0.37
ZIC3-201ENST00000287538 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
ZIC3-201ENST00000287538 ABCC1P33527 1531 aa17.32■□□□□ 0.36
ZIC3-201ENST00000287538 PANK3Q9H999 370 aa17.31■□□□□ 0.36
ZIC3-201ENST00000287538 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
ZIC3-201ENST00000287538 TMF1P82094 1093 aa17.31■□□□□ 0.36
ZIC3-201ENST00000287538 STK26Q9P289 416 aa17.3■□□□□ 0.36
ZIC3-201ENST00000287538 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
ZIC3-201ENST00000287538 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
ZIC3-201ENST00000287538 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
ZIC3-201ENST00000287538 ERBINQ96RT1 1412 aa17.28■□□□□ 0.36
ZIC3-201ENST00000287538 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
ZIC3-201ENST00000287538 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
ZIC3-201ENST00000287538 A2MP01023 1474 aa17.26■□□□□ 0.35
ZIC3-201ENST00000287538 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
ZIC3-201ENST00000287538 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
ZIC3-201ENST00000287538 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
ZIC3-201ENST00000287538 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
ZIC3-201ENST00000287538 ESF1Q9H501 851 aaKnown RBP17.24■□□□□ 0.35
ZIC3-201ENST00000287538 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
ZIC3-201ENST00000287538 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
ZIC3-201ENST00000287538 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
ZIC3-201ENST00000287538 UGGT1Q9NYU2 1555 aa17.22■□□□□ 0.35
ZIC3-201ENST00000287538 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
ZIC3-201ENST00000287538 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
ZIC3-201ENST00000287538 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
ZIC3-201ENST00000287538 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
ZIC3-201ENST00000287538 ZFYVE16Q7Z3T8 1539 aa17.2■□□□□ 0.34
ZIC3-201ENST00000287538 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
ZIC3-201ENST00000287538 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
ZIC3-201ENST00000287538 TESK2Q96S53 571 aa17.19■□□□□ 0.34
ZIC3-201ENST00000287538 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
ZIC3-201ENST00000287538 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
ZIC3-201ENST00000287538 KDM5DQ9BY66 1539 aa17.18■□□□□ 0.34
ZIC3-201ENST00000287538 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
ZIC3-201ENST00000287538 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
ZIC3-201ENST00000287538 IDI1Q13907 227 aa17.16■□□□□ 0.34
ZIC3-201ENST00000287538 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
ZIC3-201ENST00000287538 ATP10AO60312 1499 aa17.16■□□□□ 0.34
ZIC3-201ENST00000287538 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
ZIC3-201ENST00000287538 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
ZIC3-201ENST00000287538 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
ZIC3-201ENST00000287538 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
ZIC3-201ENST00000287538 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
ZIC3-201ENST00000287538 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
ZIC3-201ENST00000287538 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
ZIC3-201ENST00000287538 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
ZIC3-201ENST00000287538 KDM5CP41229 1560 aa17.12■□□□□ 0.33
ZIC3-201ENST00000287538 NOS1P29475 1434 aa17.12■□□□□ 0.33
ZIC3-201ENST00000287538 UNC13BO14795 1591 aa17.11■□□□□ 0.33
ZIC3-201ENST00000287538 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
ZIC3-201ENST00000287538 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
ZIC3-201ENST00000287538 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
ZIC3-201ENST00000287538 RALBP1Q15311 655 aa17.11■□□□□ 0.33
ZIC3-201ENST00000287538 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
ZIC3-201ENST00000287538 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms