RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.49
LSM11-201ENST00000286307 LMOD3Q0VAK6 560 aa24.39■■□□□ 1.49
LSM11-201ENST00000286307 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
LSM11-201ENST00000286307 DCAF8L1A6NGE4 600 aa24.37■■□□□ 1.49
LSM11-201ENST00000286307 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
LSM11-201ENST00000286307 NUTM2GQ5VZR2 741 aa24.36■■□□□ 1.49
LSM11-201ENST00000286307 SMC4Q9NTJ3 1288 aa24.36■■□□□ 1.49
LSM11-201ENST00000286307 PIP4K2BP78356 416 aa24.35■■□□□ 1.49
LSM11-201ENST00000286307 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
LSM11-201ENST00000286307 PLCB2Q00722 1185 aa24.35■■□□□ 1.49
LSM11-201ENST00000286307 TEFQ10587 303 aa24.35■■□□□ 1.49
LSM11-201ENST00000286307 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
LSM11-201ENST00000286307 PTMAP06454 111 aaKnown RBP24.33■■□□□ 1.49
LSM11-201ENST00000286307 PROSER2Q86WR7 435 aaPredicted RBP24.33■■□□□ 1.49
LSM11-201ENST00000286307 IGF1RP08069 1367 aa24.33■■□□□ 1.48
LSM11-201ENST00000286307 NUTM2BA6NNL0 878 aaPredicted RBP24.32■■□□□ 1.48
LSM11-201ENST00000286307 NUTM2EB1AL46 878 aaPredicted RBP24.32■■□□□ 1.48
LSM11-201ENST00000286307 NUTM2AQ8IVF1 878 aaPredicted RBP24.32■■□□□ 1.48
LSM11-201ENST00000286307 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
LSM11-201ENST00000286307 GOLGA6L4A6NEF3 574 aa24.32■■□□□ 1.48
LSM11-201ENST00000286307 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
LSM11-201ENST00000286307 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
LSM11-201ENST00000286307 HDAC5Q9UQL6 1122 aa24.31■■□□□ 1.48
LSM11-201ENST00000286307 ZNF644Q9H582 1327 aaPredicted RBP24.3■■□□□ 1.48
LSM11-201ENST00000286307 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
LSM11-201ENST00000286307 USP35Q9P2H5 1018 aa24.3■■□□□ 1.48
LSM11-201ENST00000286307 ST20-MTHFSA0A0A6YYL1 179 aa24.29■■□□□ 1.48
LSM11-201ENST00000286307 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
LSM11-201ENST00000286307 FBXW7Q969H0 707 aa24.28■■□□□ 1.48
LSM11-201ENST00000286307 PANK3Q9H999 370 aa24.28■■□□□ 1.48
LSM11-201ENST00000286307 EIF2S2P20042 333 aaKnown RBP24.27■■□□□ 1.48
LSM11-201ENST00000286307 TRIM6-TRIM34B2RNG4 842 aa24.26■■□□□ 1.47
LSM11-201ENST00000286307 PPP4R2Q9NY27 417 aa24.26■■□□□ 1.47
LSM11-201ENST00000286307 ESCO1Q5FWF5 840 aa24.26■■□□□ 1.47
LSM11-201ENST00000286307 TOMM22Q9NS69 142 aa24.26■■□□□ 1.47
LSM11-201ENST00000286307 ELL2O00472 640 aaPredicted RBP24.26■■□□□ 1.47
LSM11-201ENST00000286307 TRIM44Q96DX7 344 aaPredicted RBP24.25■■□□□ 1.47
LSM11-201ENST00000286307 SF3B2Q13435 895 aaKnown RBP24.24■■□□□ 1.47
LSM11-201ENST00000286307 NLRP2Q9NX02 1062 aa24.24■■□□□ 1.47
LSM11-201ENST00000286307 CLUAP1Q96AJ1 413 aa24.23■■□□□ 1.47
LSM11-201ENST00000286307 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
LSM11-201ENST00000286307 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
LSM11-201ENST00000286307 SPRYD3Q8NCJ5 442 aa24.22■■□□□ 1.47
LSM11-201ENST00000286307 NECTIN2Q92692 538 aa24.22■■□□□ 1.47
LSM11-201ENST00000286307 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
LSM11-201ENST00000286307 RAPGEF4Q8WZA2 1011 aa24.21■■□□□ 1.47
LSM11-201ENST00000286307 HSCBQ8IWL3 235 aa24.21■■□□□ 1.47
LSM11-201ENST00000286307 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
LSM11-201ENST00000286307 HMMRO75330 724 aa24.21■■□□□ 1.47
LSM11-201ENST00000286307 DHX57Q6P158 1386 aaKnown RBP24.2■■□□□ 1.46
LSM11-201ENST00000286307 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
LSM11-201ENST00000286307 ANP32EQ9BTT0 268 aa24.19■■□□□ 1.46
LSM11-201ENST00000286307 STRN4Q9NRL3 753 aa24.19■■□□□ 1.46
LSM11-201ENST00000286307 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
LSM11-201ENST00000286307 VPS53Q5VIR6 699 aa24.18■■□□□ 1.46
LSM11-201ENST00000286307 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
LSM11-201ENST00000286307 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
LSM11-201ENST00000286307 CFAP44Q96MT7 982 aa24.17■■□□□ 1.46
LSM11-201ENST00000286307 RWDD1Q9H446 243 aaPredicted RBP24.17■■□□□ 1.46
LSM11-201ENST00000286307 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
LSM11-201ENST00000286307 RCAN3Q9UKA8 241 aa24.17■■□□□ 1.46
LSM11-201ENST00000286307 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
LSM11-201ENST00000286307 TRIM34Q9BYJ4 488 aa24.16■■□□□ 1.46
LSM11-201ENST00000286307 RAD21O60216 631 aa24.15■■□□□ 1.46
LSM11-201ENST00000286307 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
LSM11-201ENST00000286307 RAPGEF3O95398 923 aa24.15■■□□□ 1.46
LSM11-201ENST00000286307 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
LSM11-201ENST00000286307 GOLGA6L6A8MZA4 724 aa24.13■■□□□ 1.45
LSM11-201ENST00000286307 NEXNQ0ZGT2 675 aa24.13■■□□□ 1.45
LSM11-201ENST00000286307 CCER2I3L3R5 266 aa24.13■■□□□ 1.45
LSM11-201ENST00000286307 NLRP6P59044 892 aa24.13■■□□□ 1.45
LSM11-201ENST00000286307 CABP2Q9NPB3 220 aa24.12■■□□□ 1.45
LSM11-201ENST00000286307 ABTB2Q8N961 1025 aa24.12■■□□□ 1.45
LSM11-201ENST00000286307 NLRP13Q86W25 1043 aa24.12■■□□□ 1.45
LSM11-201ENST00000286307 NOL10Q9BSC4 688 aaKnown RBP24.11■■□□□ 1.45
LSM11-201ENST00000286307 VPS37DQ86XT2 251 aa24.11■■□□□ 1.45
LSM11-201ENST00000286307 DIAPH1O60610 1272 aaKnown RBP24.1■■□□□ 1.45
LSM11-201ENST00000286307 PMFBP1Q8TBY8 1022 aa24.1■■□□□ 1.45
LSM11-201ENST00000286307 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
LSM11-201ENST00000286307 DNTTIP2Q5QJE6 756 aaKnown RBP24.1■■□□□ 1.45
LSM11-201ENST00000286307 ANKLE2Q86XL3 938 aa24.08■■□□□ 1.45
LSM11-201ENST00000286307 POGZQ7Z3K3 1410 aa24.07■■□□□ 1.44
LSM11-201ENST00000286307 C9orf78Q9NZ63 289 aaPredicted RBP24.07■■□□□ 1.44
LSM11-201ENST00000286307 CTDP1Q9Y5B0 961 aaPredicted RBP24.07■■□□□ 1.44
LSM11-201ENST00000286307 RBM33Q96EV2 1170 aaKnown RBP24.05■■□□□ 1.44
LSM11-201ENST00000286307 MARCH6O60337 910 aa24.04■■□□□ 1.44
LSM11-201ENST00000286307 SCAPERQ9BY12 1400 aa24.04■■□□□ 1.44
LSM11-201ENST00000286307 CWC22Q9HCG8 908 aaKnown RBP24.04■■□□□ 1.44
LSM11-201ENST00000286307 BCL2L13Q9BXK5 485 aa24.03■■□□□ 1.44
LSM11-201ENST00000286307 HMOX1P09601 288 aa24.03■■□□□ 1.44
LSM11-201ENST00000286307 RASSF8Q8NHQ8 419 aa24.03■■□□□ 1.44
LSM11-201ENST00000286307 CUX1P39880 1505 aa24.02■■□□□ 1.44
LSM11-201ENST00000286307 USP47Q96K76 1375 aa24.02■■□□□ 1.44
LSM11-201ENST00000286307 AMOTL1Q8IY63 956 aa24■■□□□ 1.43
LSM11-201ENST00000286307 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
LSM11-201ENST00000286307 NOL8Q76FK4 1167 aaKnown RBP24■■□□□ 1.43
LSM11-201ENST00000286307 DDX58O95786 925 aaKnown RBP24■■□□□ 1.43
LSM11-201ENST00000286307 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
LSM11-201ENST00000286307 FAM177BA6PVY3 158 aa24■■□□□ 1.43
LSM11-201ENST00000286307 SLC26A8Q96RN1 970 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms