RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CC2D1BQ5T0F9 858 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-201ENST00000281834 PELP1Q8IZL8 1130 aaKnown RBP8.26□□□□□ -1.09
TNFSF4-201ENST00000281834 PLCH2O75038 1416 aa8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 CDC42BPBQ9Y5S2 1711 aa8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 SHANK2Q9UPX8 1470 aa8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 FAM135AQ9P2D6 1515 aa8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 NUTM2DQ5VT03 806 aaPredicted RBP8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 ADGBQ8N7X0 1667 aa8.25□□□□□ -1.09
TNFSF4-201ENST00000281834 RAPGEF3O95398 923 aa8.24□□□□□ -1.09
TNFSF4-201ENST00000281834 SPATA31E1Q6ZUB1 1445 aa8.23□□□□□ -1.09
TNFSF4-201ENST00000281834 PREX2Q70Z35 1606 aa8.23□□□□□ -1.09
TNFSF4-201ENST00000281834 CROCC2H7BZ55 1655 aa8.23□□□□□ -1.09
TNFSF4-201ENST00000281834 ZCCHC11Q5TAX3 1644 aaKnown RBP8.22□□□□□ -1.09
TNFSF4-201ENST00000281834 FANCAO15360 1455 aa8.22□□□□□ -1.09
TNFSF4-201ENST00000281834 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
TNFSF4-201ENST00000281834 SHROOM2Q13796 1616 aa8.21□□□□□ -1.1
TNFSF4-201ENST00000281834 PLA2R1Q13018 1463 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 ARHGEF5Q12774 1597 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 WDR7Q9Y4E6 1490 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 CLASP1Q7Z460 1538 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 ADGRL1O94910 1474 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 PANK3Q9H999 370 aa8.2□□□□□ -1.1
TNFSF4-201ENST00000281834 KANK1Q14678 1352 aa8.19□□□□□ -1.1
TNFSF4-201ENST00000281834 MYO5CQ9NQX4 1742 aa8.19□□□□□ -1.1
TNFSF4-201ENST00000281834 CFAP70Q5T0N1 1121 aa8.19□□□□□ -1.1
TNFSF4-201ENST00000281834 TMF1P82094 1093 aa8.18□□□□□ -1.1
TNFSF4-201ENST00000281834 DHX29Q7Z478 1369 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-201ENST00000281834 SAFB2Q14151 953 aaKnown RBP eCLIP8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 PRAG1Q86YV5 1406 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 WASHC2CQ9Y4E1 1318 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 A2MP01023 1474 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 RALGAPBQ86X10 1494 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 DISP3Q9P2K9 1392 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 MLECQ14165 292 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 DUOX2Q9NRD8 1548 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
TNFSF4-201ENST00000281834 B4GALNT3Q6L9W6 998 aa8.16□□□□□ -1.1
TNFSF4-201ENST00000281834 CD109Q6YHK3 1445 aa8.16□□□□□ -1.1
TNFSF4-201ENST00000281834 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
TNFSF4-201ENST00000281834 TMEM132EQ6IEE7 984 aa8.16□□□□□ -1.1
TNFSF4-201ENST00000281834 TRAK1Q9UPV9 953 aa8.16□□□□□ -1.1
TNFSF4-201ENST00000281834 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 ABCC1P33527 1531 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 PLPPR3Q6T4P5 718 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 UHRF1BP1Q6BDS2 1440 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 TESK2Q96S53 571 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 ADGRF5Q8IZF2 1346 aa8.15□□□□□ -1.1
TNFSF4-201ENST00000281834 ERBINQ96RT1 1412 aa8.15□□□□□ -1.11
TNFSF4-201ENST00000281834 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 KTN1Q86UP2 1357 aaKnown RBP8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 FAM69CQ0P6D2 419 aa8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 KDM5CP41229 1560 aa8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 KDM5DQ9BY66 1539 aa8.14□□□□□ -1.11
TNFSF4-201ENST00000281834 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
TNFSF4-201ENST00000281834 CFAP65Q6ZU64 1925 aaKnown RBP8.13□□□□□ -1.11
TNFSF4-201ENST00000281834 STK26Q9P289 416 aa8.13□□□□□ -1.11
TNFSF4-201ENST00000281834 UGGT1Q9NYU2 1555 aa8.13□□□□□ -1.11
TNFSF4-201ENST00000281834 RALBP1Q15311 655 aa8.12□□□□□ -1.11
TNFSF4-201ENST00000281834 NLRP13Q86W25 1043 aa8.12□□□□□ -1.11
TNFSF4-201ENST00000281834 ARID4BQ4LE39 1312 aaPredicted RBP8.12□□□□□ -1.11
TNFSF4-201ENST00000281834 ATP7AQ04656 1500 aa8.11□□□□□ -1.11
TNFSF4-201ENST00000281834 STAG3Q9UJ98 1225 aa8.11□□□□□ -1.11
TNFSF4-201ENST00000281834 ZFYVE16Q7Z3T8 1539 aa8.11□□□□□ -1.11
TNFSF4-201ENST00000281834 MAST1Q9Y2H9 1570 aa8.11□□□□□ -1.11
TNFSF4-201ENST00000281834 ATP10AO60312 1499 aa8.1□□□□□ -1.11
TNFSF4-201ENST00000281834 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
TNFSF4-201ENST00000281834 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
TNFSF4-201ENST00000281834 RTEL1-TNFRSF6BF6WH68 1400 aa8.1□□□□□ -1.11
TNFSF4-201ENST00000281834 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
TNFSF4-201ENST00000281834 CCDC146Q8IYE0 955 aa8.09□□□□□ -1.11
TNFSF4-201ENST00000281834 NUDCQ9Y266 331 aa8.09□□□□□ -1.11
TNFSF4-201ENST00000281834 WDR43Q15061 677 aaKnown RBP eCLIP8.09□□□□□ -1.11
TNFSF4-201ENST00000281834 UNC13BO14795 1591 aa8.08□□□□□ -1.12
TNFSF4-201ENST00000281834 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-201ENST00000281834 IQGAP3Q86VI3 1631 aa8.08□□□□□ -1.12
TNFSF4-201ENST00000281834 ZNF518AQ6AHZ1 1483 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 CDCA8Q53HL2 280 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 NOS1P29475 1434 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 PPP4R2Q9NY27 417 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
TNFSF4-201ENST00000281834 PLIN1O60240 522 aa8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 SLC12A5Q9H2X9 1139 aa8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 GPRASP1Q5JY77 1395 aa8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 IDI1Q13907 227 aa8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 BRD4O60885 1362 aaPredicted RBP8.06□□□□□ -1.12
TNFSF4-201ENST00000281834 E9PCH4 1651 aa8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 RBM19Q9Y4C8 960 aaKnown RBP8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 PPP2R1AP30153 589 aa8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 COL17A1Q9UMD9 1497 aaPredicted RBP8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 TRPM1Q7Z4N2 1603 aa8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
TNFSF4-201ENST00000281834 ABCA9Q8IUA7 1624 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 POGZQ7Z3K3 1410 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 EIF3AQ14152 1382 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms