RNA–Protein interactions for RNA: ENST00000278559.7

CAPN5-201, Transcript of calpain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN5, Length 4,397 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-201ENST00000278559 BECN1Q14457 450 aa17.47■□□□□ 0.39
CAPN5-201ENST00000278559 PLEKHH2Q8IVE3 1493 aa17.47■□□□□ 0.39
CAPN5-201ENST00000278559 SUPT6HQ7KZ85 1726 aaKnown RBP17.46■□□□□ 0.39
CAPN5-201ENST00000278559 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
CAPN5-201ENST00000278559 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
CAPN5-201ENST00000278559 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
CAPN5-201ENST00000278559 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
CAPN5-201ENST00000278559 NBR1Q14596 966 aa17.44■□□□□ 0.38
CAPN5-201ENST00000278559 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
CAPN5-201ENST00000278559 DAPK1P53355 1430 aa17.43■□□□□ 0.38
CAPN5-201ENST00000278559 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
CAPN5-201ENST00000278559 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
CAPN5-201ENST00000278559 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
CAPN5-201ENST00000278559 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
CAPN5-201ENST00000278559 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
CAPN5-201ENST00000278559 NAIPQ13075 1403 aa17.41■□□□□ 0.38
CAPN5-201ENST00000278559 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
CAPN5-201ENST00000278559 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
CAPN5-201ENST00000278559 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
CAPN5-201ENST00000278559 ANP32BQ92688 251 aaKnown RBP17.4■□□□□ 0.38
CAPN5-201ENST00000278559 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
CAPN5-201ENST00000278559 ROCK1Q13464 1354 aa17.38■□□□□ 0.37
CAPN5-201ENST00000278559 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
CAPN5-201ENST00000278559 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
CAPN5-201ENST00000278559 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
CAPN5-201ENST00000278559 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
CAPN5-201ENST00000278559 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
CAPN5-201ENST00000278559 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
CAPN5-201ENST00000278559 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
CAPN5-201ENST00000278559 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
CAPN5-201ENST00000278559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
CAPN5-201ENST00000278559 SCAPERQ9BY12 1400 aa17.35■□□□□ 0.37
CAPN5-201ENST00000278559 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
CAPN5-201ENST00000278559 ARXQ96QS3 562 aa17.34■□□□□ 0.37
CAPN5-201ENST00000278559 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
CAPN5-201ENST00000278559 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
CAPN5-201ENST00000278559 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
CAPN5-201ENST00000278559 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
CAPN5-201ENST00000278559 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
CAPN5-201ENST00000278559 LMOD3Q0VAK6 560 aa17.28■□□□□ 0.36
CAPN5-201ENST00000278559 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
CAPN5-201ENST00000278559 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
CAPN5-201ENST00000278559 AMPHP49418 695 aa17.27■□□□□ 0.35
CAPN5-201ENST00000278559 ABCC5O15440 1437 aa17.27■□□□□ 0.35
CAPN5-201ENST00000278559 SMC4Q9NTJ3 1288 aa17.26■□□□□ 0.35
CAPN5-201ENST00000278559 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
CAPN5-201ENST00000278559 NBPF1Q3BBV0 1214 aa17.26■□□□□ 0.35
CAPN5-201ENST00000278559 COG3Q96JB2 828 aa17.26■□□□□ 0.35
CAPN5-201ENST00000278559 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
CAPN5-201ENST00000278559 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
CAPN5-201ENST00000278559 OS9Q13438 667 aaPredicted RBP17.25■□□□□ 0.35
CAPN5-201ENST00000278559 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
CAPN5-201ENST00000278559 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
CAPN5-201ENST00000278559 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
CAPN5-201ENST00000278559 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
CAPN5-201ENST00000278559 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
CAPN5-201ENST00000278559 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
CAPN5-201ENST00000278559 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
CAPN5-201ENST00000278559 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
CAPN5-201ENST00000278559 APAF1O14727 1248 aa17.23■□□□□ 0.35
CAPN5-201ENST00000278559 RAPGEF3O95398 923 aa17.23■□□□□ 0.35
CAPN5-201ENST00000278559 E9PSI1 815 aa17.22■□□□□ 0.35
CAPN5-201ENST00000278559 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
CAPN5-201ENST00000278559 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
CAPN5-201ENST00000278559 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
CAPN5-201ENST00000278559 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
CAPN5-201ENST00000278559 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
CAPN5-201ENST00000278559 KIF14Q15058 1648 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
CAPN5-201ENST00000278559 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
CAPN5-201ENST00000278559 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
CAPN5-201ENST00000278559 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
CAPN5-201ENST00000278559 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
CAPN5-201ENST00000278559 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
CAPN5-201ENST00000278559 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
CAPN5-201ENST00000278559 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
CAPN5-201ENST00000278559 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
CAPN5-201ENST00000278559 CABP2Q9NPB3 220 aa17.14■□□□□ 0.34
CAPN5-201ENST00000278559 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
CAPN5-201ENST00000278559 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
CAPN5-201ENST00000278559 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
CAPN5-201ENST00000278559 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
CAPN5-201ENST00000278559 APBB1O00213 710 aa17.11■□□□□ 0.33
CAPN5-201ENST00000278559 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
CAPN5-201ENST00000278559 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
CAPN5-201ENST00000278559 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
CAPN5-201ENST00000278559 PLIN1O60240 522 aa17.1■□□□□ 0.33
CAPN5-201ENST00000278559 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CAPN5-201ENST00000278559 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
CAPN5-201ENST00000278559 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
CAPN5-201ENST00000278559 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
CAPN5-201ENST00000278559 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
CAPN5-201ENST00000278559 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
CAPN5-201ENST00000278559 HMMRO75330 724 aa17.08■□□□□ 0.33
CAPN5-201ENST00000278559 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.33
CAPN5-201ENST00000278559 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms