RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 MAPKBP1O60336 1514 aa18.92■□□□□ 0.62
CNOT9-201ENST00000273064 EIF5BO60841 1220 aaKnown RBP18.92■□□□□ 0.62
CNOT9-201ENST00000273064 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
CNOT9-201ENST00000273064 CRBNQ96SW2 442 aa18.92■□□□□ 0.62
CNOT9-201ENST00000273064 EFCAB5A4FU69 1503 aa18.92■□□□□ 0.62
CNOT9-201ENST00000273064 SKAP1Q86WV1 359 aa18.91■□□□□ 0.62
CNOT9-201ENST00000273064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.9■□□□□ 0.62
CNOT9-201ENST00000273064 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
CNOT9-201ENST00000273064 DAPK1P53355 1430 aa18.9■□□□□ 0.62
CNOT9-201ENST00000273064 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
CNOT9-201ENST00000273064 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.61
CNOT9-201ENST00000273064 ELL2O00472 640 aaPredicted RBP18.88■□□□□ 0.61
CNOT9-201ENST00000273064 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
CNOT9-201ENST00000273064 DEKP35659 375 aaKnown RBP18.87■□□□□ 0.61
CNOT9-201ENST00000273064 APBB1O00213 710 aa18.87■□□□□ 0.61
CNOT9-201ENST00000273064 TROQ12816 1431 aaPredicted RBP18.86■□□□□ 0.61
CNOT9-201ENST00000273064 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
CNOT9-201ENST00000273064 ABCC5O15440 1437 aa18.85■□□□□ 0.61
CNOT9-201ENST00000273064 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
CNOT9-201ENST00000273064 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
CNOT9-201ENST00000273064 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
CNOT9-201ENST00000273064 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
CNOT9-201ENST00000273064 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
CNOT9-201ENST00000273064 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
CNOT9-201ENST00000273064 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
CNOT9-201ENST00000273064 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
CNOT9-201ENST00000273064 COG6Q9Y2V7 657 aa18.83■□□□□ 0.6
CNOT9-201ENST00000273064 SLKQ9H2G2 1235 aaPredicted RBP18.82■□□□□ 0.6
CNOT9-201ENST00000273064 MIA2Q96PC5 1412 aa18.82■□□□□ 0.6
CNOT9-201ENST00000273064 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
CNOT9-201ENST00000273064 PDE4AP27815 886 aa18.79■□□□□ 0.6
CNOT9-201ENST00000273064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
CNOT9-201ENST00000273064 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
CNOT9-201ENST00000273064 SUPT6HQ7KZ85 1726 aaKnown RBP18.78■□□□□ 0.6
CNOT9-201ENST00000273064 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
CNOT9-201ENST00000273064 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
CNOT9-201ENST00000273064 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
CNOT9-201ENST00000273064 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
CNOT9-201ENST00000273064 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
CNOT9-201ENST00000273064 IFT140Q96RY7 1462 aa18.77■□□□□ 0.6
CNOT9-201ENST00000273064 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.59
CNOT9-201ENST00000273064 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.59
CNOT9-201ENST00000273064 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
CNOT9-201ENST00000273064 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
CNOT9-201ENST00000273064 CABP2Q9NPB3 220 aa18.75■□□□□ 0.59
CNOT9-201ENST00000273064 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
CNOT9-201ENST00000273064 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
CNOT9-201ENST00000273064 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
CNOT9-201ENST00000273064 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
CNOT9-201ENST00000273064 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
CNOT9-201ENST00000273064 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
CNOT9-201ENST00000273064 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-201ENST00000273064 A0A0G2JS52 829 aa18.73■□□□□ 0.59
CNOT9-201ENST00000273064 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-201ENST00000273064 SCAPERQ9BY12 1400 aa18.72■□□□□ 0.59
CNOT9-201ENST00000273064 BECN1Q14457 450 aa18.71■□□□□ 0.59
CNOT9-201ENST00000273064 PANK1Q8TE04 598 aa18.71■□□□□ 0.59
CNOT9-201ENST00000273064 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
CNOT9-201ENST00000273064 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
CNOT9-201ENST00000273064 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
CNOT9-201ENST00000273064 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
CNOT9-201ENST00000273064 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
CNOT9-201ENST00000273064 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
CNOT9-201ENST00000273064 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
CNOT9-201ENST00000273064 BCAR3O75815 825 aa18.68■□□□□ 0.58
CNOT9-201ENST00000273064 MTHFSP49914 203 aa18.68■□□□□ 0.58
CNOT9-201ENST00000273064 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
CNOT9-201ENST00000273064 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
CNOT9-201ENST00000273064 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
CNOT9-201ENST00000273064 MSH5O43196 834 aa18.66■□□□□ 0.58
CNOT9-201ENST00000273064 LTV1Q96GA3 475 aaPredicted RBP18.65■□□□□ 0.58
CNOT9-201ENST00000273064 GZF1Q9H116 711 aaPredicted RBP18.65■□□□□ 0.58
CNOT9-201ENST00000273064 C20orf194Q5TEA3 1177 aa18.65■□□□□ 0.58
CNOT9-201ENST00000273064 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.58
CNOT9-201ENST00000273064 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
CNOT9-201ENST00000273064 CUL7Q14999 1698 aa18.64■□□□□ 0.57
CNOT9-201ENST00000273064 HMOX1P09601 288 aa18.64■□□□□ 0.57
CNOT9-201ENST00000273064 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
CNOT9-201ENST00000273064 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
CNOT9-201ENST00000273064 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
CNOT9-201ENST00000273064 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
CNOT9-201ENST00000273064 ROCK1Q13464 1354 aa18.62■□□□□ 0.57
CNOT9-201ENST00000273064 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
CNOT9-201ENST00000273064 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
CNOT9-201ENST00000273064 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
CNOT9-201ENST00000273064 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
CNOT9-201ENST00000273064 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
CNOT9-201ENST00000273064 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
CNOT9-201ENST00000273064 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
CNOT9-201ENST00000273064 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.57
CNOT9-201ENST00000273064 E9PSI1 815 aa18.58■□□□□ 0.57
CNOT9-201ENST00000273064 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
CNOT9-201ENST00000273064 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
CNOT9-201ENST00000273064 TSR2Q969E8 191 aaKnown RBP18.58■□□□□ 0.56
CNOT9-201ENST00000273064 PLEKHH2Q8IVE3 1493 aa18.57■□□□□ 0.56
CNOT9-201ENST00000273064 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
CNOT9-201ENST00000273064 RIPK4P57078 832 aa18.55■□□□□ 0.56
CNOT9-201ENST00000273064 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
CNOT9-201ENST00000273064 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
CNOT9-201ENST00000273064 NECTIN2Q92692 538 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms