RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 DCAF11Q8TEB1 546 aa31.82■■■□□ 2.68
RETREG2-201ENST00000273048 RALBP1Q15311 655 aa31.8■■■□□ 2.68
RETREG2-201ENST00000273048 ADCY10Q96PN6 1610 aa31.78■■■□□ 2.68
RETREG2-201ENST00000273048 ARHGEF12Q9NZN5 1544 aa31.78■■■□□ 2.68
RETREG2-201ENST00000273048 NPM2Q86SE8 214 aaKnown RBP31.77■■■□□ 2.68
RETREG2-201ENST00000273048 RCAN3Q9UKA8 241 aa31.77■■■□□ 2.68
RETREG2-201ENST00000273048 C9orf84Q5VXU9 1444 aa31.74■■■□□ 2.67
RETREG2-201ENST00000273048 KTN1Q86UP2 1357 aaKnown RBP31.72■■■□□ 2.67
RETREG2-201ENST00000273048 E9PCH4 1651 aa31.71■■■□□ 2.67
RETREG2-201ENST00000273048 RTL5Q5HYW3 569 aaPredicted RBP31.71■■■□□ 2.67
RETREG2-201ENST00000273048 CDC42BPAQ5VT25 1732 aa31.71■■■□□ 2.67
RETREG2-201ENST00000273048 ABCA8O94911 1581 aa31.68■■■□□ 2.66
RETREG2-201ENST00000273048 PLEKHD1A6NEE1 506 aa31.67■■■□□ 2.66
RETREG2-201ENST00000273048 NLRP13Q86W25 1043 aa31.67■■■□□ 2.66
RETREG2-201ENST00000273048 CDCA7LQ96GN5 454 aa31.67■■■□□ 2.66
RETREG2-201ENST00000273048 ATP10BO94823 1461 aa31.66■■■□□ 2.66
RETREG2-201ENST00000273048 TCERG1O14776 1098 aaKnown RBP31.65■■■□□ 2.66
RETREG2-201ENST00000273048 TSPY4P0CV99 314 aa31.65■■■□□ 2.66
RETREG2-201ENST00000273048 TSPY10P0CW01 314 aa31.65■■■□□ 2.66
RETREG2-201ENST00000273048 SHANK2Q9UPX8 1470 aa31.64■■■□□ 2.66
RETREG2-201ENST00000273048 PDE4AP27815 886 aa31.64■■■□□ 2.66
RETREG2-201ENST00000273048 PARD3Q8TEW0 1356 aa31.63■■■□□ 2.65
RETREG2-201ENST00000273048 KDM5DQ9BY66 1539 aa31.63■■■□□ 2.65
RETREG2-201ENST00000273048 HNRNPMP52272 730 aaKnown RBP eCLIP31.63■■■□□ 2.65
RETREG2-201ENST00000273048 ABCC10Q5T3U5 1492 aa31.6■■■□□ 2.65
RETREG2-201ENST00000273048 PLIN1O60240 522 aa31.59■■■□□ 2.65
RETREG2-201ENST00000273048 NBPF1Q3BBV0 1214 aa31.58■■■□□ 2.65
RETREG2-201ENST00000273048 PTPRGP23470 1445 aa31.58■■■□□ 2.65
RETREG2-201ENST00000273048 PDE3BQ13370 1112 aa31.58■■■□□ 2.65
RETREG2-201ENST00000273048 PER1O15534 1290 aaPredicted RBP31.57■■■□□ 2.64
RETREG2-201ENST00000273048 BACH2Q9BYV9 841 aa31.56■■■□□ 2.64
RETREG2-201ENST00000273048 RGL3Q3MIN7 710 aa31.56■■■□□ 2.64
RETREG2-201ENST00000273048 CC2D1BQ5T0F9 858 aaKnown RBP31.55■■■□□ 2.64
RETREG2-201ENST00000273048 LAS1LQ9Y4W2 734 aaKnown RBP31.55■■■□□ 2.64
RETREG2-201ENST00000273048 SKAP1Q86WV1 359 aa31.54■■■□□ 2.64
RETREG2-201ENST00000273048 PRAG1Q86YV5 1406 aa31.54■■■□□ 2.64
RETREG2-201ENST00000273048 TRPM1Q7Z4N2 1603 aa31.51■■■□□ 2.64
RETREG2-201ENST00000273048 FAM135AQ9P2D6 1515 aa31.49■■■□□ 2.63
RETREG2-201ENST00000273048 MS4A1P11836 297 aa31.48■■■□□ 2.63
RETREG2-201ENST00000273048 CCDC144AA2RUR9 1427 aa31.47■■■□□ 2.63
RETREG2-201ENST00000273048 DISP3Q9P2K9 1392 aa31.46■■■□□ 2.63
RETREG2-201ENST00000273048 CRBNQ96SW2 442 aa31.46■■■□□ 2.63
RETREG2-201ENST00000273048 NEFMP07197 916 aa31.43■■■□□ 2.62
RETREG2-201ENST00000273048 PANK3Q9H999 370 aa31.43■■■□□ 2.62
RETREG2-201ENST00000273048 TESK2Q96S53 571 aa31.42■■■□□ 2.62
RETREG2-201ENST00000273048 COL17A1Q9UMD9 1497 aaPredicted RBP31.42■■■□□ 2.62
RETREG2-201ENST00000273048 BLMP54132 1417 aaPredicted RBP31.41■■■□□ 2.62
RETREG2-201ENST00000273048 CHD1O14646 1710 aa31.4■■■□□ 2.62
RETREG2-201ENST00000273048 ARHGEF5Q12774 1597 aa31.4■■■□□ 2.62
RETREG2-201ENST00000273048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.39■■■□□ 2.62
RETREG2-201ENST00000273048 A2MP01023 1474 aa31.38■■■□□ 2.61
RETREG2-201ENST00000273048 GPRASP1Q5JY77 1395 aa31.38■■■□□ 2.61
RETREG2-201ENST00000273048 PLA2R1Q13018 1463 aa31.37■■■□□ 2.61
RETREG2-201ENST00000273048 C20orf194Q5TEA3 1177 aa31.37■■■□□ 2.61
RETREG2-201ENST00000273048 CCDC141Q6ZP82 1450 aa31.36■■■□□ 2.61
RETREG2-201ENST00000273048 CDC42BPBQ9Y5S2 1711 aa31.35■■■□□ 2.61
RETREG2-201ENST00000273048 SAMD9LQ8IVG5 1584 aa31.34■■■□□ 2.61
RETREG2-201ENST00000273048 WASHC2CQ9Y4E1 1318 aa31.34■■■□□ 2.61
RETREG2-201ENST00000273048 ERBINQ96RT1 1412 aa31.33■■■□□ 2.61
RETREG2-201ENST00000273048 PRDM15P57071 1507 aaPredicted RBP31.32■■■□□ 2.6
RETREG2-201ENST00000273048 IL27Q8NEV9 243 aa31.31■■■□□ 2.6
RETREG2-201ENST00000273048 ADAMTS8Q9UP79 889 aa31.3■■■□□ 2.6
RETREG2-201ENST00000273048 PREX2Q70Z35 1606 aa31.29■■■□□ 2.6
RETREG2-201ENST00000273048 ZMYM4Q5VZL5 1548 aa31.28■■■□□ 2.6
RETREG2-201ENST00000273048 USP35Q9P2H5 1018 aa31.28■■■□□ 2.6
RETREG2-201ENST00000273048 INSRP06213 1382 aa31.28■■■□□ 2.6
RETREG2-201ENST00000273048 TMF1P82094 1093 aa31.27■■■□□ 2.6
RETREG2-201ENST00000273048 ERCC6L2Q5T890 1561 aa31.25■■■□□ 2.59
RETREG2-201ENST00000273048 PPM1GO15355 546 aaPredicted RBP31.25■■■□□ 2.59
RETREG2-201ENST00000273048 TTC37Q6PGP7 1564 aa31.25■■■□□ 2.59
RETREG2-201ENST00000273048 LAMC1P11047 1609 aa31.24■■■□□ 2.59
RETREG2-201ENST00000273048 MYO5CQ9NQX4 1742 aa31.24■■■□□ 2.59
RETREG2-201ENST00000273048 SYCP2Q9BX26 1530 aa31.23■■■□□ 2.59
RETREG2-201ENST00000273048 PLEKHH2Q8IVE3 1493 aa31.23■■■□□ 2.59
RETREG2-201ENST00000273048 KDM2BQ8NHM5 1336 aa31.21■■■□□ 2.59
RETREG2-201ENST00000273048 DDRGK1Q96HY6 314 aa31.21■■■□□ 2.59
RETREG2-201ENST00000273048 PLEKHH1Q9ULM0 1364 aa31.2■■■□□ 2.59
RETREG2-201ENST00000273048 SLC4A3P48751 1232 aa31.2■■■□□ 2.59
RETREG2-201ENST00000273048 UNC13BO14795 1591 aa31.2■■■□□ 2.58
RETREG2-201ENST00000273048 RSPH4AQ5TD94 716 aa31.2■■■□□ 2.58
RETREG2-201ENST00000273048 RTN4Q9NQC3 1192 aaKnown RBP31.19■■■□□ 2.58
RETREG2-201ENST00000273048 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
RETREG2-201ENST00000273048 SHROOM2Q13796 1616 aa31.18■■■□□ 2.58
RETREG2-201ENST00000273048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.585e-6■■■■■ 27.2
RETREG2-201ENST00000273048 DUSP27Q5VZP5 1158 aa31.17■■■□□ 2.58
RETREG2-201ENST00000273048 EIF2AK4Q9P2K8 1649 aaKnown RBP31.15■■■□□ 2.58
RETREG2-201ENST00000273048 MAGI2Q86UL8 1455 aa31.15■■■□□ 2.58
RETREG2-201ENST00000273048 PPP2R1AP30153 589 aa31.15■■■□□ 2.58
RETREG2-201ENST00000273048 WDR43Q15061 677 aaKnown RBP eCLIP31.14■■■□□ 2.57
RETREG2-201ENST00000273048 CENPQQ7L2Z9 268 aaPredicted RBP31.12■■■□□ 2.57
RETREG2-201ENST00000273048 KNSTRNQ9Y448 316 aa31.12■■■□□ 2.57
RETREG2-201ENST00000273048 WDR7Q9Y4E6 1490 aa31.11■■■□□ 2.57
RETREG2-201ENST00000273048 IQGAP3Q86VI3 1631 aa31.1■■■□□ 2.57
RETREG2-201ENST00000273048 ABCC2Q92887 1545 aa31.09■■■□□ 2.57
RETREG2-201ENST00000273048 ANO8Q9HCE9 1232 aaPredicted RBP31.07■■■□□ 2.57
RETREG2-201ENST00000273048 GOLGA2Q08379 1002 aa31.07■■■□□ 2.56
RETREG2-201ENST00000273048 NFKBIBQ15653 356 aa31.07■■■□□ 2.56
RETREG2-201ENST00000273048 ZNF521Q96K83 1311 aa31.07■■■□□ 2.56
RETREG2-201ENST00000273048 MAST1Q9Y2H9 1570 aa31.07■■■□□ 2.56
RETREG2-201ENST00000273048 C8orf34Q49A92 452 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms