RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
CNGA3-201ENST00000272602 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
CNGA3-201ENST00000272602 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
CNGA3-201ENST00000272602 BACH2Q9BYV9 841 aa14.21□□□□□ -0.13
CNGA3-201ENST00000272602 ASXL2Q76L83 1435 aa14.21□□□□□ -0.13
CNGA3-201ENST00000272602 CD109Q6YHK3 1445 aa14.2□□□□□ -0.14
CNGA3-201ENST00000272602 RRP1P56182 461 aaKnown RBP14.2□□□□□ -0.14
CNGA3-201ENST00000272602 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
CNGA3-201ENST00000272602 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
CNGA3-201ENST00000272602 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
CNGA3-201ENST00000272602 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
CNGA3-201ENST00000272602 SOX12O15370 315 aa14.19□□□□□ -0.14
CNGA3-201ENST00000272602 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
CNGA3-201ENST00000272602 RGS3P49796 1198 aa14.19□□□□□ -0.14
CNGA3-201ENST00000272602 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
CNGA3-201ENST00000272602 EFCAB5A4FU69 1503 aa14.18□□□□□ -0.14
CNGA3-201ENST00000272602 ZBTB7CA1YPR0 619 aa14.17□□□□□ -0.14
CNGA3-201ENST00000272602 KIAA0556O60303 1618 aa14.16□□□□□ -0.14
CNGA3-201ENST00000272602 TMEM132EQ6IEE7 984 aa14.16□□□□□ -0.14
CNGA3-201ENST00000272602 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
CNGA3-201ENST00000272602 MAGI3Q5TCQ9 1506 aa14.14□□□□□ -0.15
CNGA3-201ENST00000272602 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
CNGA3-201ENST00000272602 TRAK1Q9UPV9 953 aa14.13□□□□□ -0.15
CNGA3-201ENST00000272602 CDCA7LQ96GN5 454 aa14.12□□□□□ -0.15
CNGA3-201ENST00000272602 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
CNGA3-201ENST00000272602 PNISRQ8TF01 805 aaKnown RBP14.11□□□□□ -0.15
CNGA3-201ENST00000272602 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
CNGA3-201ENST00000272602 CRBNQ96SW2 442 aa14.11□□□□□ -0.15
CNGA3-201ENST00000272602 HECW1Q76N89 1606 aa14.11□□□□□ -0.15
CNGA3-201ENST00000272602 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
CNGA3-201ENST00000272602 NAIPQ13075 1403 aa14.11□□□□□ -0.15
CNGA3-201ENST00000272602 MS4A1P11836 297 aa14.1□□□□□ -0.15
CNGA3-201ENST00000272602 GLIPR1L2Q4G1C9 344 aa14.1□□□□□ -0.15
CNGA3-201ENST00000272602 HFM1A2PYH4 1435 aa14.1□□□□□ -0.15
CNGA3-201ENST00000272602 UGGT2Q9NYU1 1516 aa14.1□□□□□ -0.15
CNGA3-201ENST00000272602 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
CNGA3-201ENST00000272602 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
CNGA3-201ENST00000272602 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 RAPGEF6Q8TEU7 1601 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 ABCC5O15440 1437 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 NBPF1Q3BBV0 1214 aa14.09□□□□□ -0.15
CNGA3-201ENST00000272602 SLKQ9H2G2 1235 aaPredicted RBP14.09□□□□□ -0.15
CNGA3-201ENST00000272602 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
CNGA3-201ENST00000272602 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
CNGA3-201ENST00000272602 KANK1Q14678 1352 aa14.07□□□□□ -0.16
CNGA3-201ENST00000272602 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
CNGA3-201ENST00000272602 DAPK1P53355 1430 aa14.06□□□□□ -0.16
CNGA3-201ENST00000272602 SLC26A8Q96RN1 970 aa14.06□□□□□ -0.16
CNGA3-201ENST00000272602 POGKQ9P215 609 aa14.06□□□□□ -0.16
CNGA3-201ENST00000272602 FANCAO15360 1455 aa14.05□□□□□ -0.16
CNGA3-201ENST00000272602 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
CNGA3-201ENST00000272602 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
CNGA3-201ENST00000272602 KIF14Q15058 1648 aa14.05□□□□□ -0.16
CNGA3-201ENST00000272602 CAMSAP2Q08AD1 1489 aa14.05□□□□□ -0.16
CNGA3-201ENST00000272602 CFAP65Q6ZU64 1925 aaKnown RBP14.05□□□□□ -0.16
CNGA3-201ENST00000272602 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
CNGA3-201ENST00000272602 ADGRL1O94910 1474 aa14.04□□□□□ -0.16
CNGA3-201ENST00000272602 RSPH4AQ5TD94 716 aa14.04□□□□□ -0.16
CNGA3-201ENST00000272602 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
CNGA3-201ENST00000272602 MAP3K1Q13233 1512 aa14.03□□□□□ -0.16
CNGA3-201ENST00000272602 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
CNGA3-201ENST00000272602 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
CNGA3-201ENST00000272602 EHBP1L1Q8N3D4 1523 aa14.03□□□□□ -0.16
CNGA3-201ENST00000272602 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.16
CNGA3-201ENST00000272602 GZF1Q9H116 711 aaPredicted RBP14.02□□□□□ -0.16
CNGA3-201ENST00000272602 USP47Q96K76 1375 aa14.02□□□□□ -0.17
CNGA3-201ENST00000272602 SPRYD3Q8NCJ5 442 aa14.02□□□□□ -0.17
CNGA3-201ENST00000272602 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
CNGA3-201ENST00000272602 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
CNGA3-201ENST00000272602 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
CNGA3-201ENST00000272602 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
CNGA3-201ENST00000272602 HSPA2P54652 639 aa13.99□□□□□ -0.17
CNGA3-201ENST00000272602 FAM161AQ3B820 660 aa13.99□□□□□ -0.17
CNGA3-201ENST00000272602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
CNGA3-201ENST00000272602 ABCC2Q92887 1545 aa13.99□□□□□ -0.17
CNGA3-201ENST00000272602 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
CNGA3-201ENST00000272602 WDR7Q9Y4E6 1490 aa13.98□□□□□ -0.17
CNGA3-201ENST00000272602 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
CNGA3-201ENST00000272602 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
CNGA3-201ENST00000272602 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
CNGA3-201ENST00000272602 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
CNGA3-201ENST00000272602 IDI1Q13907 227 aa13.95□□□□□ -0.18
CNGA3-201ENST00000272602 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
CNGA3-201ENST00000272602 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
CNGA3-201ENST00000272602 NLRP13Q86W25 1043 aa13.95□□□□□ -0.18
CNGA3-201ENST00000272602 CCDC144AA2RUR9 1427 aa13.95□□□□□ -0.18
CNGA3-201ENST00000272602 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
CNGA3-201ENST00000272602 RALBP1Q15311 655 aa13.94□□□□□ -0.18
CNGA3-201ENST00000272602 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
CNGA3-201ENST00000272602 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
CNGA3-201ENST00000272602 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
CNGA3-201ENST00000272602 PLCH2O75038 1416 aa13.93□□□□□ -0.18
CNGA3-201ENST00000272602 A0A0G2JS52 829 aa13.93□□□□□ -0.18
CNGA3-201ENST00000272602 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
CNGA3-201ENST00000272602 BECN1Q14457 450 aa13.93□□□□□ -0.18
CNGA3-201ENST00000272602 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
CNGA3-201ENST00000272602 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
CNGA3-201ENST00000272602 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms