RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
OTOF-201ENST00000272371 TPM2P07951 284 aa13.07□□□□□ -0.32
OTOF-201ENST00000272371 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
OTOF-201ENST00000272371 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
OTOF-201ENST00000272371 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
OTOF-201ENST00000272371 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
OTOF-201ENST00000272371 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
OTOF-201ENST00000272371 MSH5O43196 834 aa13.06□□□□□ -0.32
OTOF-201ENST00000272371 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
OTOF-201ENST00000272371 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
OTOF-201ENST00000272371 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
OTOF-201ENST00000272371 PRM3Q9NNZ6 103 aa13.05□□□□□ -0.32
OTOF-201ENST00000272371 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
OTOF-201ENST00000272371 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
OTOF-201ENST00000272371 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
OTOF-201ENST00000272371 BECN2A8MW95 431 aa13.04□□□□□ -0.32
OTOF-201ENST00000272371 MORC1Q86VD1 984 aa13.04□□□□□ -0.32
OTOF-201ENST00000272371 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
OTOF-201ENST00000272371 ARGLU1Q9NWB6 273 aaPredicted RBP13.04□□□□□ -0.32
OTOF-201ENST00000272371 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
OTOF-201ENST00000272371 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
OTOF-201ENST00000272371 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
OTOF-201ENST00000272371 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
OTOF-201ENST00000272371 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
OTOF-201ENST00000272371 TPM1P09493 284 aa13.02□□□□□ -0.32
OTOF-201ENST00000272371 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.32
OTOF-201ENST00000272371 RALBP1Q15311 655 aa13.02□□□□□ -0.32
OTOF-201ENST00000272371 RASSF8Q8NHQ8 419 aa13.02□□□□□ -0.33
OTOF-201ENST00000272371 POGKQ9P215 609 aa13.02□□□□□ -0.33
OTOF-201ENST00000272371 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
OTOF-201ENST00000272371 AK7Q96M32 723 aa13.02□□□□□ -0.33
OTOF-201ENST00000272371 HOMER1Q86YM7 354 aa13.01□□□□□ -0.33
OTOF-201ENST00000272371 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
OTOF-201ENST00000272371 ACBD3Q9H3P7 528 aa13.01□□□□□ -0.33
OTOF-201ENST00000272371 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
OTOF-201ENST00000272371 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
OTOF-201ENST00000272371 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
OTOF-201ENST00000272371 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
OTOF-201ENST00000272371 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
OTOF-201ENST00000272371 H3BQV1 296 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 RUFY1Q96T51 708 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
OTOF-201ENST00000272371 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
OTOF-201ENST00000272371 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
OTOF-201ENST00000272371 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
OTOF-201ENST00000272371 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
OTOF-201ENST00000272371 CCDC39Q9UFE4 941 aa12.98□□□□□ -0.33
OTOF-201ENST00000272371 H0YHG0 523 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 HMMRO75330 724 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
OTOF-201ENST00000272371 CHMP5Q9NZZ3 219 aa12.97□□□□□ -0.33
OTOF-201ENST00000272371 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
OTOF-201ENST00000272371 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
OTOF-201ENST00000272371 MRE11P49959 708 aa12.96□□□□□ -0.33
OTOF-201ENST00000272371 NFKBIBQ15653 356 aa12.96□□□□□ -0.34
OTOF-201ENST00000272371 IL27Q8NEV9 243 aa12.96□□□□□ -0.34
OTOF-201ENST00000272371 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
OTOF-201ENST00000272371 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
OTOF-201ENST00000272371 KANK1Q14678 1352 aa12.95□□□□□ -0.34
OTOF-201ENST00000272371 CDR1P51861 262 aa12.95□□□□□ -0.34
OTOF-201ENST00000272371 SETD5Q9C0A6 1442 aa12.95□□□□□ -0.34
OTOF-201ENST00000272371 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
OTOF-201ENST00000272371 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
OTOF-201ENST00000272371 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
OTOF-201ENST00000272371 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
OTOF-201ENST00000272371 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
OTOF-201ENST00000272371 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
OTOF-201ENST00000272371 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
OTOF-201ENST00000272371 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
OTOF-201ENST00000272371 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
OTOF-201ENST00000272371 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.34
OTOF-201ENST00000272371 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
OTOF-201ENST00000272371 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
OTOF-201ENST00000272371 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
OTOF-201ENST00000272371 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
OTOF-201ENST00000272371 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
OTOF-201ENST00000272371 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
OTOF-201ENST00000272371 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
OTOF-201ENST00000272371 EVA1CP58658 441 aa12.9□□□□□ -0.34
OTOF-201ENST00000272371 PHLDB1Q86UU1 1377 aa12.9□□□□□ -0.34
OTOF-201ENST00000272371 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
OTOF-201ENST00000272371 PPP1R1BQ9UD71 204 aaPredicted RBP12.9□□□□□ -0.34
OTOF-201ENST00000272371 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
OTOF-201ENST00000272371 GORABQ5T7V8 394 aa12.89□□□□□ -0.35
OTOF-201ENST00000272371 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
OTOF-201ENST00000272371 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
OTOF-201ENST00000272371 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
OTOF-201ENST00000272371 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
OTOF-201ENST00000272371 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
OTOF-201ENST00000272371 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
OTOF-201ENST00000272371 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
OTOF-201ENST00000272371 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms