RNA–Protein interactions for RNA: ENST00000269385.8

CBX8-201, Transcript of chromobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX8, Length 3,791 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-201ENST00000269385 SHANK2Q9UPX8 1470 aa21.34■■□□□ 1.01
CBX8-201ENST00000269385 FGD1P98174 961 aa21.33■■□□□ 1
CBX8-201ENST00000269385 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
CBX8-201ENST00000269385 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
CBX8-201ENST00000269385 BCORL1Q5H9F3 1711 aa21.31■■□□□ 1
CBX8-201ENST00000269385 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
CBX8-201ENST00000269385 PDIA4P13667 645 aaKnown RBP21.31■■□□□ 1
CBX8-201ENST00000269385 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
CBX8-201ENST00000269385 PDE4AP27815 886 aa21.29■■□□□ 1
CBX8-201ENST00000269385 AAMPQ13685 434 aa21.29■■□□□ 1
CBX8-201ENST00000269385 PTPRGP23470 1445 aa21.27■□□□□ 0.99
CBX8-201ENST00000269385 BCL11BQ9C0K0 894 aaPredicted RBP21.26■□□□□ 0.99
CBX8-201ENST00000269385 L1TD1Q5T7N2 865 aaKnown RBP21.26■□□□□ 0.99
CBX8-201ENST00000269385 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
CBX8-201ENST00000269385 MAST1Q9Y2H9 1570 aa21.25■□□□□ 0.99
CBX8-201ENST00000269385 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
CBX8-201ENST00000269385 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
CBX8-201ENST00000269385 TCERG1O14776 1098 aaKnown RBP21.24■□□□□ 0.99
CBX8-201ENST00000269385 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
CBX8-201ENST00000269385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.22■□□□□ 0.99
CBX8-201ENST00000269385 KDM5CP41229 1560 aa21.22■□□□□ 0.99
CBX8-201ENST00000269385 ARID3AQ99856 593 aa21.21■□□□□ 0.99
CBX8-201ENST00000269385 UNC13BO14795 1591 aa21.21■□□□□ 0.99
CBX8-201ENST00000269385 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
CBX8-201ENST00000269385 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
CBX8-201ENST00000269385 FRAT2O75474 233 aaPredicted RBP21.2■□□□□ 0.98
CBX8-201ENST00000269385 RGS3P49796 1198 aa21.19■□□□□ 0.98
CBX8-201ENST00000269385 POLR3GLQ9BT43 218 aa21.18■□□□□ 0.98
CBX8-201ENST00000269385 FOXD1Q16676 465 aa21.17■□□□□ 0.98
CBX8-201ENST00000269385 TRIM44Q96DX7 344 aaPredicted RBP21.17■□□□□ 0.98
CBX8-201ENST00000269385 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
CBX8-201ENST00000269385 RRAGDQ9NQL2 400 aaPredicted RBP21.17■□□□□ 0.98
CBX8-201ENST00000269385 E9PCH4 1651 aa21.16■□□□□ 0.98
CBX8-201ENST00000269385 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
CBX8-201ENST00000269385 DCAF11Q8TEB1 546 aa21.16■□□□□ 0.98
CBX8-201ENST00000269385 MYO5CQ9NQX4 1742 aa21.16■□□□□ 0.98
CBX8-201ENST00000269385 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
CBX8-201ENST00000269385 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
CBX8-201ENST00000269385 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
CBX8-201ENST00000269385 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
CBX8-201ENST00000269385 ARHGEF12Q9NZN5 1544 aa21.12■□□□□ 0.97
CBX8-201ENST00000269385 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
CBX8-201ENST00000269385 L3MBTL2Q969R5 705 aa21.11■□□□□ 0.97
CBX8-201ENST00000269385 FBLN2P98095 1184 aa21.11■□□□□ 0.97
CBX8-201ENST00000269385 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
CBX8-201ENST00000269385 UHRF1BP1Q6BDS2 1440 aa21.1■□□□□ 0.97
CBX8-201ENST00000269385 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
CBX8-201ENST00000269385 TNNT2P45379 298 aaPredicted RBP21.09■□□□□ 0.97
CBX8-201ENST00000269385 IQGAP3Q86VI3 1631 aa21.09■□□□□ 0.97
CBX8-201ENST00000269385 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.97
CBX8-201ENST00000269385 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
CBX8-201ENST00000269385 TRPM1Q7Z4N2 1603 aa21.06■□□□□ 0.96
CBX8-201ENST00000269385 GZF1Q9H116 711 aaPredicted RBP21.06■□□□□ 0.96
CBX8-201ENST00000269385 NCLP19338 710 aaKnown RBP21.05■□□□□ 0.96
CBX8-201ENST00000269385 HSPA5P11021 654 aaKnown RBP21.05■□□□□ 0.96
CBX8-201ENST00000269385 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
CBX8-201ENST00000269385 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
CBX8-201ENST00000269385 PLA2R1Q13018 1463 aa21.04■□□□□ 0.96
CBX8-201ENST00000269385 GOLGA6L3A6NEY3 463 aa21.03■□□□□ 0.96
CBX8-201ENST00000269385 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
CBX8-201ENST00000269385 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
CBX8-201ENST00000269385 ZBED9Q6R2W3 1325 aa21.03■□□□□ 0.96
CBX8-201ENST00000269385 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
CBX8-201ENST00000269385 CNTLNQ9NXG0 1405 aa21.02■□□□□ 0.96
CBX8-201ENST00000269385 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
CBX8-201ENST00000269385 CCDC141Q6ZP82 1450 aa21■□□□□ 0.95
CBX8-201ENST00000269385 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
CBX8-201ENST00000269385 DEPDC5O75140 1603 aa21■□□□□ 0.95
CBX8-201ENST00000269385 RALGAPBQ86X10 1494 aa20.99■□□□□ 0.95
CBX8-201ENST00000269385 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 CCDC7Q96M83 1385 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 POGKQ9P215 609 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 ABCC1P33527 1531 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 LAMC1P11047 1609 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
CBX8-201ENST00000269385 SLKQ9H2G2 1235 aaPredicted RBP20.97■□□□□ 0.95
CBX8-201ENST00000269385 DHX29Q7Z478 1369 aaKnown RBP20.97■□□□□ 0.95
CBX8-201ENST00000269385 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
CBX8-201ENST00000269385 MS4A1P11836 297 aa20.96■□□□□ 0.95
CBX8-201ENST00000269385 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
CBX8-201ENST00000269385 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
CBX8-201ENST00000269385 CDK11BP21127 795 aaKnown RBP20.95■□□□□ 0.94
CBX8-201ENST00000269385 MYH16Q9H6N6 1097 aa20.95■□□□□ 0.94
CBX8-201ENST00000269385 ABCA9Q8IUA7 1624 aa20.95■□□□□ 0.94
CBX8-201ENST00000269385 ZHX1Q9UKY1 873 aaPredicted RBP20.95■□□□□ 0.94
CBX8-201ENST00000269385 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
CBX8-201ENST00000269385 CLCN1P35523 988 aa20.94■□□□□ 0.94
CBX8-201ENST00000269385 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
CBX8-201ENST00000269385 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
CBX8-201ENST00000269385 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
CBX8-201ENST00000269385 TPM2P07951 284 aa20.92■□□□□ 0.94
CBX8-201ENST00000269385 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
CBX8-201ENST00000269385 ATP10AO60312 1499 aa20.91■□□□□ 0.94
CBX8-201ENST00000269385 ANP32BQ92688 251 aaKnown RBP20.91■□□□□ 0.94
CBX8-201ENST00000269385 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
CBX8-201ENST00000269385 ARAP3Q8WWN8 1544 aa20.9■□□□□ 0.94
CBX8-201ENST00000269385 BECN1Q14457 450 aa20.89■□□□□ 0.93
CBX8-201ENST00000269385 TAF7LQ5H9L4 462 aa20.89■□□□□ 0.93
CBX8-201ENST00000269385 KIF15Q9NS87 1388 aa20.89■□□□□ 0.93
CBX8-201ENST00000269385 VWDEQ8N2E2 1590 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms