RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
CDH11-201ENST00000268603 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
CDH11-201ENST00000268603 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
CDH11-201ENST00000268603 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
CDH11-201ENST00000268603 CT47A1Q5JQC4 288 aaPredicted RBP15.61■□□□□ 0.09
CDH11-201ENST00000268603 FAM184AQ8NB25 1140 aa15.6■□□□□ 0.09
CDH11-201ENST00000268603 AMPHP49418 695 aa15.6■□□□□ 0.09
CDH11-201ENST00000268603 GOLGA6L3A6NEY3 463 aa15.6■□□□□ 0.09
CDH11-201ENST00000268603 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 NGEFQ8N5V2 710 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 KIF3AQ9Y496 699 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 HMMRO75330 724 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 ZFYVE27Q5T4F4 411 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 VPS37DQ86XT2 251 aa15.59■□□□□ 0.09
CDH11-201ENST00000268603 SYTL4Q96C24 671 aaPredicted RBP15.59■□□□□ 0.09
CDH11-201ENST00000268603 GPS2Q13227 327 aa15.58■□□□□ 0.08
CDH11-201ENST00000268603 RWDD1Q9H446 243 aaPredicted RBP15.58■□□□□ 0.08
CDH11-201ENST00000268603 ZNF771Q7L3S4 317 aaPredicted RBP15.58■□□□□ 0.08
CDH11-201ENST00000268603 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
CDH11-201ENST00000268603 TMEM132AQ24JP5 1023 aa15.57■□□□□ 0.08
CDH11-201ENST00000268603 MCTP1Q6DN14 999 aa15.57■□□□□ 0.08
CDH11-201ENST00000268603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.57■□□□□ 0.08
CDH11-201ENST00000268603 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
CDH11-201ENST00000268603 EID1Q9Y6B2 187 aa15.56■□□□□ 0.08
CDH11-201ENST00000268603 CCAR1Q8IX12 1150 aaKnown RBP15.56■□□□□ 0.08
CDH11-201ENST00000268603 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
CDH11-201ENST00000268603 GOLGA6L19H0YKK7 550 aa15.55■□□□□ 0.08
CDH11-201ENST00000268603 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
CDH11-201ENST00000268603 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
CDH11-201ENST00000268603 APPP05067 770 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
CDH11-201ENST00000268603 CLIP1P30622 1438 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 TRIM29Q14134 588 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 WWC2Q6AWC2 1192 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 RILPL2Q969X0 211 aa15.54■□□□□ 0.08
CDH11-201ENST00000268603 PHF14O94880 888 aa15.53■□□□□ 0.08
CDH11-201ENST00000268603 IPO7O95373 1038 aaKnown RBP15.53■□□□□ 0.08
CDH11-201ENST00000268603 HSP90AA2PQ14568 343 aaPredicted RBP15.52■□□□□ 0.08
CDH11-201ENST00000268603 BECN2A8MW95 431 aa15.52■□□□□ 0.07
CDH11-201ENST00000268603 NUTM2DQ5VT03 806 aaPredicted RBP15.51■□□□□ 0.07
CDH11-201ENST00000268603 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
CDH11-201ENST00000268603 HSP90AB2PQ58FF8 381 aa15.51■□□□□ 0.07
CDH11-201ENST00000268603 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
CDH11-201ENST00000268603 C1orf141Q5JVX7 400 aa15.51■□□□□ 0.07
CDH11-201ENST00000268603 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
CDH11-201ENST00000268603 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
CDH11-201ENST00000268603 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
CDH11-201ENST00000268603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
CDH11-201ENST00000268603 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
CDH11-201ENST00000268603 PPM1FP49593 454 aaPredicted RBP15.49■□□□□ 0.07
CDH11-201ENST00000268603 ST18O60284 1047 aa15.48■□□□□ 0.07
CDH11-201ENST00000268603 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
CDH11-201ENST00000268603 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
CDH11-201ENST00000268603 FYB1O15117 783 aa15.47■□□□□ 0.07
CDH11-201ENST00000268603 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
CDH11-201ENST00000268603 MTMR7Q9Y216 660 aa15.47■□□□□ 0.07
CDH11-201ENST00000268603 NFXL1Q6ZNB6 911 aa15.47■□□□□ 0.07
CDH11-201ENST00000268603 MAP7D2Q96T17 732 aa15.46■□□□□ 0.07
CDH11-201ENST00000268603 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
CDH11-201ENST00000268603 CCDC97Q96F63 343 aaPredicted RBP15.46■□□□□ 0.07
CDH11-201ENST00000268603 EPS15P42566 896 aa15.46■□□□□ 0.07
CDH11-201ENST00000268603 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.06
CDH11-201ENST00000268603 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.06
CDH11-201ENST00000268603 TEX35Q5T0J7 233 aa15.45■□□□□ 0.06
CDH11-201ENST00000268603 RUFY1Q96T51 708 aa15.45■□□□□ 0.06
CDH11-201ENST00000268603 CCNB3Q8WWL7 1395 aa15.45■□□□□ 0.06
CDH11-201ENST00000268603 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
CDH11-201ENST00000268603 ERICH2A1L162 156 aa15.44■□□□□ 0.06
CDH11-201ENST00000268603 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
CDH11-201ENST00000268603 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
CDH11-201ENST00000268603 FOSBP53539 338 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 CPLX1O14810 134 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 CDR1P51861 262 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 AK7Q96M32 723 aa15.42■□□□□ 0.06
CDH11-201ENST00000268603 CHMP4CQ96CF2 233 aa15.41■□□□□ 0.06
CDH11-201ENST00000268603 PLCD4Q9BRC7 762 aa15.41■□□□□ 0.06
CDH11-201ENST00000268603 TERF2IPQ9NYB0 399 aa15.41■□□□□ 0.06
CDH11-201ENST00000268603 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
CDH11-201ENST00000268603 CCDC27Q2M243 656 aa15.41■□□□□ 0.06
CDH11-201ENST00000268603 HOMER1Q86YM7 354 aa15.41■□□□□ 0.06
CDH11-201ENST00000268603 LMOD3Q0VAK6 560 aa15.4■□□□□ 0.06
CDH11-201ENST00000268603 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
CDH11-201ENST00000268603 HOOK1Q9UJC3 728 aaKnown RBP15.4■□□□□ 0.06
CDH11-201ENST00000268603 TRDNQ13061 729 aa15.4■□□□□ 0.06
CDH11-201ENST00000268603 NEXNQ0ZGT2 675 aa15.39■□□□□ 0.05
CDH11-201ENST00000268603 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
CDH11-201ENST00000268603 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
CDH11-201ENST00000268603 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
CDH11-201ENST00000268603 OFD1O75665 1012 aa15.39■□□□□ 0.05
CDH11-201ENST00000268603 RDXP35241 583 aaKnown RBP15.39■□□□□ 0.05
CDH11-201ENST00000268603 NOM1Q5C9Z4 860 aaKnown RBP15.39■□□□□ 0.05
CDH11-201ENST00000268603 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
CDH11-201ENST00000268603 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
CDH11-201ENST00000268603 C9orf78Q9NZ63 289 aaPredicted RBP15.37■□□□□ 0.05
CDH11-201ENST00000268603 KDM4AO75164 1064 aa15.37■□□□□ 0.05
CDH11-201ENST00000268603 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
CDH11-201ENST00000268603 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms