RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.08
SRF-201ENST00000265354 ITPRIPQ8IWB1 547 aa21.76■■□□□ 1.07
SRF-201ENST00000265354 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
SRF-201ENST00000265354 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
SRF-201ENST00000265354 UBE2Q2Q8WVN8 375 aa21.76■■□□□ 1.07
SRF-201ENST00000265354 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
SRF-201ENST00000265354 BCAR3O75815 825 aa21.75■■□□□ 1.07
SRF-201ENST00000265354 PLCB2Q00722 1185 aa21.74■■□□□ 1.07
SRF-201ENST00000265354 DNTTIP2Q5QJE6 756 aaKnown RBP21.74■■□□□ 1.07
SRF-201ENST00000265354 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
SRF-201ENST00000265354 MAPK8IP3Q9UPT6 1336 aa21.73■■□□□ 1.07
SRF-201ENST00000265354 PTMAP06454 111 aaKnown RBP21.73■■□□□ 1.07
SRF-201ENST00000265354 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
SRF-201ENST00000265354 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
SRF-201ENST00000265354 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
SRF-201ENST00000265354 PLEKHG5O94827 1062 aa21.69■■□□□ 1.06
SRF-201ENST00000265354 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.062e-8■■■■□ 19.7
SRF-201ENST00000265354 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
SRF-201ENST00000265354 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
SRF-201ENST00000265354 POGKQ9P215 609 aa21.66■■□□□ 1.06
SRF-201ENST00000265354 STK26Q9P289 416 aa21.66■■□□□ 1.06
SRF-201ENST00000265354 BRD4O60885 1362 aaPredicted RBP21.65■■□□□ 1.06
SRF-201ENST00000265354 ELL2O00472 640 aaPredicted RBP21.65■■□□□ 1.06
SRF-201ENST00000265354 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.05
SRF-201ENST00000265354 FOXD4L5Q5VV16 416 aaPredicted RBP21.63■■□□□ 1.05
SRF-201ENST00000265354 FOXD4L4Q8WXT5 416 aaPredicted RBP21.63■■□□□ 1.05
SRF-201ENST00000265354 PMFBP1Q8TBY8 1022 aa21.63■■□□□ 1.05
SRF-201ENST00000265354 TRAK1Q9UPV9 953 aa21.62■■□□□ 1.05
SRF-201ENST00000265354 MSNP26038 577 aaKnown RBP21.62■■□□□ 1.05
SRF-201ENST00000265354 CCDC144AA2RUR9 1427 aa21.6■■□□□ 1.05
SRF-201ENST00000265354 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
SRF-201ENST00000265354 SRPK2P78362 688 aaKnown RBP21.59■■□□□ 1.05
SRF-201ENST00000265354 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.05
SRF-201ENST00000265354 SOX12O15370 315 aa21.58■■□□□ 1.05
SRF-201ENST00000265354 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
SRF-201ENST00000265354 E9PSI1 815 aa21.58■■□□□ 1.05
SRF-201ENST00000265354 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
SRF-201ENST00000265354 FOXD4L6Q3SYB3 417 aaPredicted RBP21.56■■□□□ 1.04
SRF-201ENST00000265354 FOXD4L3Q6VB84 417 aaPredicted RBP21.56■■□□□ 1.04
SRF-201ENST00000265354 GGT6Q6P531 493 aa21.55■■□□□ 1.04
SRF-201ENST00000265354 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
SRF-201ENST00000265354 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
SRF-201ENST00000265354 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
SRF-201ENST00000265354 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
SRF-201ENST00000265354 GBP4Q96PP9 640 aa21.55■■□□□ 1.04
SRF-201ENST00000265354 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
SRF-201ENST00000265354 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
SRF-201ENST00000265354 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
SRF-201ENST00000265354 KIF3BO15066 747 aa21.51■■□□□ 1.03
SRF-201ENST00000265354 LNPKQ9C0E8 428 aa21.51■■□□□ 1.03
SRF-201ENST00000265354 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
SRF-201ENST00000265354 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
SRF-201ENST00000265354 DDX49Q9Y6V7 483 aaKnown RBP21.49■■□□□ 1.03
SRF-201ENST00000265354 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
SRF-201ENST00000265354 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
SRF-201ENST00000265354 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
SRF-201ENST00000265354 ZMYND15Q9H091 742 aa21.47■■□□□ 1.03
SRF-201ENST00000265354 TRAK2O60296 914 aa21.46■■□□□ 1.03
SRF-201ENST00000265354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
SRF-201ENST00000265354 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
SRF-201ENST00000265354 CHMP5Q9NZZ3 219 aa21.44■■□□□ 1.02
SRF-201ENST00000265354 NESP48681 1621 aa21.43■■□□□ 1.02
SRF-201ENST00000265354 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
SRF-201ENST00000265354 TCP11L2Q8N4U5 519 aa21.43■■□□□ 1.02
SRF-201ENST00000265354 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
SRF-201ENST00000265354 CASC1Q6TDU7 716 aa21.42■■□□□ 1.02
SRF-201ENST00000265354 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
SRF-201ENST00000265354 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
SRF-201ENST00000265354 CDK13Q14004 1512 aaKnown RBP21.41■■□□□ 1.02
SRF-201ENST00000265354 FAM13BQ9NYF5 915 aa21.4■■□□□ 1.02
SRF-201ENST00000265354 TAOK2Q9UL54 1235 aa21.4■■□□□ 1.02
SRF-201ENST00000265354 FAM43AQ8N2R8 423 aa21.4■■□□□ 1.02
SRF-201ENST00000265354 TSR2Q969E8 191 aaKnown RBP21.4■■□□□ 1.02
SRF-201ENST00000265354 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
SRF-201ENST00000265354 IGHDP01880 384 aa21.39■■□□□ 1.02
SRF-201ENST00000265354 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
SRF-201ENST00000265354 DDX11L8A8MPP1 907 aa21.37■■□□□ 1.01
SRF-201ENST00000265354 MTHFSP49914 203 aa21.37■■□□□ 1.01
SRF-201ENST00000265354 DUSP27Q5VZP5 1158 aa21.37■■□□□ 1.01
SRF-201ENST00000265354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
SRF-201ENST00000265354 TMEM132EQ6IEE7 984 aa21.36■■□□□ 1.01
SRF-201ENST00000265354 DAPK1P53355 1430 aa21.36■■□□□ 1.01
SRF-201ENST00000265354 PTPN23Q9H3S7 1636 aa21.36■■□□□ 1.01
SRF-201ENST00000265354 MAP3K1Q13233 1512 aa21.35■■□□□ 1.01
SRF-201ENST00000265354 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
SRF-201ENST00000265354 SLFN5Q08AF3 891 aa21.34■■□□□ 1.01
SRF-201ENST00000265354 EFCAB2Q5VUJ9 269 aa21.34■■□□□ 1.01
SRF-201ENST00000265354 CARMIL2Q6F5E8 1435 aa21.34■■□□□ 1.01
SRF-201ENST00000265354 MPNDQ8N594 471 aa21.34■■□□□ 1.01
SRF-201ENST00000265354 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
SRF-201ENST00000265354 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
SRF-201ENST00000265354 SEC24BO95487 1268 aa21.33■■□□□ 1.01
SRF-201ENST00000265354 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
SRF-201ENST00000265354 C1orf115Q9H7X2 142 aa21.33■■□□□ 1
SRF-201ENST00000265354 RBM10P98175 930 aaKnown RBP21.32■■□□□ 1
SRF-201ENST00000265354 MCM4P33991 863 aa21.32■■□□□ 1
SRF-201ENST00000265354 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
SRF-201ENST00000265354 C14orf37Q86TY3 774 aa21.31■■□□□ 1
SRF-201ENST00000265354 PANK2Q9BZ23 570 aa21.31■■□□□ 1
SRF-201ENST00000265354 RPRD2Q5VT52 1461 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms