RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
SUB1-201ENST00000265073 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
SUB1-201ENST00000265073 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
SUB1-201ENST00000265073 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
SUB1-201ENST00000265073 FAM69CQ0P6D2 419 aa12.24□□□□□ -0.45
SUB1-201ENST00000265073 CD109Q6YHK3 1445 aa12.24□□□□□ -0.45
SUB1-201ENST00000265073 USP47Q96K76 1375 aa12.23□□□□□ -0.45
SUB1-201ENST00000265073 FAM9BQ8IZU0 186 aa12.23□□□□□ -0.45
SUB1-201ENST00000265073 PLA2R1Q13018 1463 aa12.21□□□□□ -0.45
SUB1-201ENST00000265073 ABCC1P33527 1531 aa12.21□□□□□ -0.45
SUB1-201ENST00000265073 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
SUB1-201ENST00000265073 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
SUB1-201ENST00000265073 MLECQ14165 292 aa12.2□□□□□ -0.46
SUB1-201ENST00000265073 BCANQ96GW7 911 aa12.19□□□□□ -0.46
SUB1-201ENST00000265073 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
SUB1-201ENST00000265073 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUB1-201ENST00000265073 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
SUB1-201ENST00000265073 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
SUB1-201ENST00000265073 WASHC2CQ9Y4E1 1318 aa12.14□□□□□ -0.47
SUB1-201ENST00000265073 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
SUB1-201ENST00000265073 ZFYVE16Q7Z3T8 1539 aa12.14□□□□□ -0.47
SUB1-201ENST00000265073 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
SUB1-201ENST00000265073 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
SUB1-201ENST00000265073 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
SUB1-201ENST00000265073 IRX6P78412 446 aaPredicted RBP12.12□□□□□ -0.47
SUB1-201ENST00000265073 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
SUB1-201ENST00000265073 A2MP01023 1474 aa12.12□□□□□ -0.47
SUB1-201ENST00000265073 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
SUB1-201ENST00000265073 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
SUB1-201ENST00000265073 TSPOAP1O95153 1857 aa12.11□□□□□ -0.47
SUB1-201ENST00000265073 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
SUB1-201ENST00000265073 DHX29Q7Z478 1369 aaKnown RBP12.11□□□□□ -0.47
SUB1-201ENST00000265073 KANK1Q14678 1352 aa12.11□□□□□ -0.47
SUB1-201ENST00000265073 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
SUB1-201ENST00000265073 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
SUB1-201ENST00000265073 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
SUB1-201ENST00000265073 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 SAFB2Q14151 953 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUB1-201ENST00000265073 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
SUB1-201ENST00000265073 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
SUB1-201ENST00000265073 CCER2I3L3R5 266 aa12.08□□□□□ -0.48
SUB1-201ENST00000265073 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
SUB1-201ENST00000265073 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 UNC13BO14795 1591 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 ATP10AO60312 1499 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
SUB1-201ENST00000265073 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
SUB1-201ENST00000265073 KIDINS220Q9ULH0 1771 aa12.06□□□□□ -0.48
SUB1-201ENST00000265073 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 E9PCH4 1651 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 IQGAP3Q86VI3 1631 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 FKBP8Q14318 412 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
SUB1-201ENST00000265073 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
SUB1-201ENST00000265073 PANK3Q9H999 370 aa12.03□□□□□ -0.48
SUB1-201ENST00000265073 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
SUB1-201ENST00000265073 KDM5CP41229 1560 aa12.03□□□□□ -0.48
SUB1-201ENST00000265073 TESK2Q96S53 571 aa12.03□□□□□ -0.48
SUB1-201ENST00000265073 STK26Q9P289 416 aa12.03□□□□□ -0.48
SUB1-201ENST00000265073 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SUB1-201ENST00000265073 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.48
SUB1-201ENST00000265073 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
SUB1-201ENST00000265073 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
SUB1-201ENST00000265073 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
SUB1-201ENST00000265073 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
SUB1-201ENST00000265073 IDI1Q13907 227 aa12□□□□□ -0.49
SUB1-201ENST00000265073 ARAP3Q8WWN8 1544 aa12□□□□□ -0.49
SUB1-201ENST00000265073 CLTCL1P53675 1640 aa12□□□□□ -0.49
SUB1-201ENST00000265073 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
SUB1-201ENST00000265073 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
SUB1-201ENST00000265073 NPATQ14207 1427 aa11.99□□□□□ -0.49
SUB1-201ENST00000265073 CEP152O94986 1710 aa11.99□□□□□ -0.49
SUB1-201ENST00000265073 TMF1P82094 1093 aa11.98□□□□□ -0.49
SUB1-201ENST00000265073 NOS1P29475 1434 aa11.98□□□□□ -0.49
SUB1-201ENST00000265073 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
SUB1-201ENST00000265073 FRMPD1Q5SYB0 1578 aa11.97□□□□□ -0.49
SUB1-201ENST00000265073 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
SUB1-201ENST00000265073 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
SUB1-201ENST00000265073 TRPM1Q7Z4N2 1603 aa11.96□□□□□ -0.5
SUB1-201ENST00000265073 PPRC1Q5VV67 1664 aaKnown RBP11.95□□□□□ -0.5
SUB1-201ENST00000265073 PTPRTO14522 1441 aa11.95□□□□□ -0.5
SUB1-201ENST00000265073 COL17A1Q9UMD9 1497 aaPredicted RBP11.95□□□□□ -0.5
SUB1-201ENST00000265073 HECW2Q9P2P5 1572 aa11.95□□□□□ -0.5
SUB1-201ENST00000265073 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
SUB1-201ENST00000265073 MLH3Q9UHC1 1453 aa11.94□□□□□ -0.5
SUB1-201ENST00000265073 TRPM2O94759 1503 aa11.94□□□□□ -0.5
SUB1-201ENST00000265073 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
SUB1-201ENST00000265073 TET3O43151 1660 aa11.93□□□□□ -0.5
SUB1-201ENST00000265073 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
SUB1-201ENST00000265073 NEO1Q92859 1461 aa11.92□□□□□ -0.5
SUB1-201ENST00000265073 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
SUB1-201ENST00000265073 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
SUB1-201ENST00000265073 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms