RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 HMMRO75330 724 aa17.76■□□□□ 0.43
CUX2-201ENST00000261726 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
CUX2-201ENST00000261726 CCAR2Q8N163 923 aaKnown RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 PKD2Q13563 968 aa17.74■□□□□ 0.43
CUX2-201ENST00000261726 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
CUX2-201ENST00000261726 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
CUX2-201ENST00000261726 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
CUX2-201ENST00000261726 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
CUX2-201ENST00000261726 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 H3BQV1 296 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
CUX2-201ENST00000261726 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 PHF14O94880 888 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 RAD21O60216 631 aa17.7■□□□□ 0.42
CUX2-201ENST00000261726 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
CUX2-201ENST00000261726 ST18O60284 1047 aa17.69■□□□□ 0.42
CUX2-201ENST00000261726 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
CUX2-201ENST00000261726 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
CUX2-201ENST00000261726 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 AMPHP49418 695 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 HDAC5Q9UQL6 1122 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
CUX2-201ENST00000261726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
CUX2-201ENST00000261726 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
CUX2-201ENST00000261726 RALBP1Q15311 655 aa17.67■□□□□ 0.42
CUX2-201ENST00000261726 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
CUX2-201ENST00000261726 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 IPO9Q96P70 1041 aaKnown RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 TPM2P07951 284 aa17.64■□□□□ 0.42
CUX2-201ENST00000261726 TCEAL9Q9UHQ7 104 aa17.64■□□□□ 0.42
CUX2-201ENST00000261726 GOLGA6L19H0YKK7 550 aa17.64■□□□□ 0.41
CUX2-201ENST00000261726 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
CUX2-201ENST00000261726 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
CUX2-201ENST00000261726 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
CUX2-201ENST00000261726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.62■□□□□ 0.41
CUX2-201ENST00000261726 MSH5O43196 834 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
CUX2-201ENST00000261726 BECN2A8MW95 431 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 TPM1P09493 284 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
CUX2-201ENST00000261726 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
CUX2-201ENST00000261726 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 HSP90AA2PQ14568 343 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.41
CUX2-201ENST00000261726 DDX11L8A8MPP1 907 aa17.58■□□□□ 0.4
CUX2-201ENST00000261726 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.4
CUX2-201ENST00000261726 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
CUX2-201ENST00000261726 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 NUP155O75694 1391 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
CUX2-201ENST00000261726 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
CUX2-201ENST00000261726 GPS2Q13227 327 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
CUX2-201ENST00000261726 AMOTL1Q8IY63 956 aa17.53■□□□□ 0.4
CUX2-201ENST00000261726 TRIM29Q14134 588 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 APPP05067 770 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 KIF3BO15066 747 aa17.52■□□□□ 0.39
CUX2-201ENST00000261726 EVA1CP58658 441 aa17.52■□□□□ 0.39
CUX2-201ENST00000261726 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
CUX2-201ENST00000261726 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
CUX2-201ENST00000261726 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 IPO7O95373 1038 aaKnown RBP17.49■□□□□ 0.39
CUX2-201ENST00000261726 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
CUX2-201ENST00000261726 FOSBP53539 338 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 PLIN1O60240 522 aa17.48■□□□□ 0.39
CUX2-201ENST00000261726 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms