RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 PLEKHH2Q8IVE3 1493 aa26.32■■□□□ 1.8
LPCAT3-201ENST00000261407 PLA2R1Q13018 1463 aa26.32■■□□□ 1.8
LPCAT3-201ENST00000261407 ROCK2O75116 1388 aaKnown RBP26.31■■□□□ 1.8
LPCAT3-201ENST00000261407 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
LPCAT3-201ENST00000261407 CCDC144AA2RUR9 1427 aa26.3■■□□□ 1.8
LPCAT3-201ENST00000261407 ARID4BQ4LE39 1312 aaPredicted RBP26.3■■□□□ 1.8
LPCAT3-201ENST00000261407 MYO5CQ9NQX4 1742 aa26.27■■□□□ 1.8
LPCAT3-201ENST00000261407 MAST1Q9Y2H9 1570 aa26.26■■□□□ 1.79
LPCAT3-201ENST00000261407 PRAG1Q86YV5 1406 aa26.24■■□□□ 1.79
LPCAT3-201ENST00000261407 UNC13BO14795 1591 aa26.23■■□□□ 1.79
LPCAT3-201ENST00000261407 RBM19Q9Y4C8 960 aaKnown RBP26.22■■□□□ 1.79
LPCAT3-201ENST00000261407 PLCH2O75038 1416 aa26.22■■□□□ 1.79
LPCAT3-201ENST00000261407 ZCCHC11Q5TAX3 1644 aaKnown RBP26.21■■□□□ 1.79
LPCAT3-201ENST00000261407 A2MP01023 1474 aa26.2■■□□□ 1.78
LPCAT3-201ENST00000261407 TRAPPC8Q9Y2L5 1435 aa26.19■■□□□ 1.78
LPCAT3-201ENST00000261407 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
LPCAT3-201ENST00000261407 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
LPCAT3-201ENST00000261407 PLXNC1O60486 1568 aa26.18■■□□□ 1.78
LPCAT3-201ENST00000261407 TMC1Q8TDI8 760 aa26.17■■□□□ 1.78
LPCAT3-201ENST00000261407 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
LPCAT3-201ENST00000261407 AFAP1Q8N556 730 aa26.16■■□□□ 1.78
LPCAT3-201ENST00000261407 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
LPCAT3-201ENST00000261407 IQGAP3Q86VI3 1631 aa26.15■■□□□ 1.78
LPCAT3-201ENST00000261407 DUOX2Q9NRD8 1548 aa26.15■■□□□ 1.78
LPCAT3-201ENST00000261407 B4GALNT3Q6L9W6 998 aa26.1■■□□□ 1.77
LPCAT3-201ENST00000261407 PPP4R2Q9NY27 417 aa26.1■■□□□ 1.77
LPCAT3-201ENST00000261407 ERBINQ96RT1 1412 aa26.1■■□□□ 1.77
LPCAT3-201ENST00000261407 ABCC1P33527 1531 aa26.09■■□□□ 1.77
LPCAT3-201ENST00000261407 UHRF1BP1LA0JNW5 1464 aa26.09■■□□□ 1.77
LPCAT3-201ENST00000261407 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
LPCAT3-201ENST00000261407 TESK2Q96S53 571 aa26.07■■□□□ 1.76
LPCAT3-201ENST00000261407 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
LPCAT3-201ENST00000261407 DISP3Q9P2K9 1392 aa26.07■■□□□ 1.76
LPCAT3-201ENST00000261407 MYBBP1AQ9BQG0 1328 aaKnown RBP26.06■■□□□ 1.76
LPCAT3-201ENST00000261407 E9PCH4 1651 aa26.06■■□□□ 1.76
LPCAT3-201ENST00000261407 SMG6Q86US8 1419 aaKnown RBP26.06■■□□□ 1.76
LPCAT3-201ENST00000261407 ERICH6BQ5W0A0 696 aa26.05■■□□□ 1.76
LPCAT3-201ENST00000261407 SPAG9O60271 1321 aaKnown RBP26.05■■□□□ 1.76
LPCAT3-201ENST00000261407 NUDCQ9Y266 331 aa26.04■■□□□ 1.76
LPCAT3-201ENST00000261407 PER1O15534 1290 aaPredicted RBP26.04■■□□□ 1.76
LPCAT3-201ENST00000261407 RALBP1Q15311 655 aa26.04■■□□□ 1.76
LPCAT3-201ENST00000261407 ATP10AO60312 1499 aa26.02■■□□□ 1.76
LPCAT3-201ENST00000261407 LRPPRCP42704 1394 aaKnown RBP26■■□□□ 1.75
LPCAT3-201ENST00000261407 PRDM15P57071 1507 aaPredicted RBP26■■□□□ 1.75
LPCAT3-201ENST00000261407 BRD4O60885 1362 aaPredicted RBP26■■□□□ 1.75
LPCAT3-201ENST00000261407 CC2D1BQ5T0F9 858 aaKnown RBP25.99■■□□□ 1.75
LPCAT3-201ENST00000261407 SALL2Q9Y467 1007 aaPredicted RBP25.98■■□□□ 1.75
LPCAT3-201ENST00000261407 COL17A1Q9UMD9 1497 aaPredicted RBP25.97■■□□□ 1.75
LPCAT3-201ENST00000261407 PANK3Q9H999 370 aa25.97■■□□□ 1.75
LPCAT3-201ENST00000261407 PARD3Q8TEW0 1356 aa25.96■■□□□ 1.75
LPCAT3-201ENST00000261407 KTN1Q86UP2 1357 aaKnown RBP25.95■■□□□ 1.75
LPCAT3-201ENST00000261407 ZFYVE16Q7Z3T8 1539 aa25.95■■□□□ 1.74
LPCAT3-201ENST00000261407 NLRP13Q86W25 1043 aa25.93■■□□□ 1.74
LPCAT3-201ENST00000261407 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
LPCAT3-201ENST00000261407 MYT1Q01538 1121 aa25.91■■□□□ 1.74
LPCAT3-201ENST00000261407 TMF1P82094 1093 aa25.91■■□□□ 1.74
LPCAT3-201ENST00000261407 LAMC1P11047 1609 aa25.91■■□□□ 1.74
LPCAT3-201ENST00000261407 WDR7Q9Y4E6 1490 aa25.91■■□□□ 1.74
LPCAT3-201ENST00000261407 RTEL1-TNFRSF6BF6WH68 1400 aa25.9■■□□□ 1.74
LPCAT3-201ENST00000261407 RNF123Q5XPI4 1314 aa25.9■■□□□ 1.74
LPCAT3-201ENST00000261407 EIF2AK4Q9P2K8 1649 aaKnown RBP25.9■■□□□ 1.74
LPCAT3-201ENST00000261407 FANCAO15360 1455 aa25.89■■□□□ 1.74
LPCAT3-201ENST00000261407 ANP32EQ9BTT0 268 aa25.89■■□□□ 1.74
LPCAT3-201ENST00000261407 KIF3BO15066 747 aa25.89■■□□□ 1.73
LPCAT3-201ENST00000261407 SCAPERQ9BY12 1400 aa25.88■■□□□ 1.73
LPCAT3-201ENST00000261407 MSH5O43196 834 aa25.85■■□□□ 1.73
LPCAT3-201ENST00000261407 ARAP3Q8WWN8 1544 aa25.85■■□□□ 1.73
LPCAT3-201ENST00000261407 TRPM2O94759 1503 aa25.84■■□□□ 1.73
LPCAT3-201ENST00000261407 MADDQ8WXG6 1647 aa25.83■■□□□ 1.73
LPCAT3-201ENST00000261407 RNF17Q9BXT8 1623 aaKnown RBP25.83■■□□□ 1.73
LPCAT3-201ENST00000261407 CLTCL1P53675 1640 aa25.83■■□□□ 1.73
LPCAT3-201ENST00000261407 PTPRTO14522 1441 aa25.83■■□□□ 1.73
LPCAT3-201ENST00000261407 ATP7AQ04656 1500 aa25.83■■□□□ 1.73
LPCAT3-201ENST00000261407 ABCA9Q8IUA7 1624 aa25.81■■□□□ 1.72
LPCAT3-201ENST00000261407 ADGRL1O94910 1474 aa25.81■■□□□ 1.72
LPCAT3-201ENST00000261407 SPHKAPQ2M3C7 1700 aa25.8■■□□□ 1.72
LPCAT3-201ENST00000261407 DEPDC5O75140 1603 aa25.79■■□□□ 1.72
LPCAT3-201ENST00000261407 CDCA7LQ96GN5 454 aa25.79■■□□□ 1.72
LPCAT3-201ENST00000261407 ASXL2Q76L83 1435 aa25.78■■□□□ 1.72
LPCAT3-201ENST00000261407 INO80Q9ULG1 1556 aaPredicted RBP25.78■■□□□ 1.72
LPCAT3-201ENST00000261407 WASHC2CQ9Y4E1 1318 aa25.78■■□□□ 1.72
LPCAT3-201ENST00000261407 UGGT1Q9NYU2 1555 aa25.77■■□□□ 1.72
LPCAT3-201ENST00000261407 CEP152O94986 1710 aa25.76■■□□□ 1.71
LPCAT3-201ENST00000261407 CCDC136Q96JN2 1154 aa25.76■■□□□ 1.71
LPCAT3-201ENST00000261407 KANK1Q14678 1352 aa25.76■■□□□ 1.71
LPCAT3-201ENST00000261407 TET3O43151 1660 aa25.74■■□□□ 1.71
LPCAT3-201ENST00000261407 IQGAP1P46940 1657 aa25.73■■□□□ 1.71
LPCAT3-201ENST00000261407 VWDEQ8N2E2 1590 aa25.72■■□□□ 1.71
LPCAT3-201ENST00000261407 CFAP70Q5T0N1 1121 aa25.72■■□□□ 1.71
LPCAT3-201ENST00000261407 SCAF11Q99590 1463 aaKnown RBP25.71■■□□□ 1.71
LPCAT3-201ENST00000261407 FANCIQ9NVI1 1328 aa25.7■■□□□ 1.71
LPCAT3-201ENST00000261407 MROH1Q8NDA8 1641 aa25.7■■□□□ 1.71
LPCAT3-201ENST00000261407 RCAN3Q9UKA8 241 aa25.7■■□□□ 1.7
LPCAT3-201ENST00000261407 ADGRF5Q8IZF2 1346 aa25.7■■□□□ 1.7
LPCAT3-201ENST00000261407 RRP1P56182 461 aaKnown RBP25.7■■□□□ 1.7
LPCAT3-201ENST00000261407 KNSTRNQ9Y448 316 aa25.7■■□□□ 1.7
LPCAT3-201ENST00000261407 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
LPCAT3-201ENST00000261407 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
LPCAT3-201ENST00000261407 EXOC6Q8TAG9 804 aa25.66■■□□□ 1.7
LPCAT3-201ENST00000261407 PPP2R1AP30153 589 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms