RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
COL8A1-201ENST00000261037 NOC3LQ8WTT2 800 aaKnown RBP15.14■□□□□ 0.01
COL8A1-201ENST00000261037 L3MBTL2Q969R5 705 aa15.14■□□□□ 0.01
COL8A1-201ENST00000261037 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
COL8A1-201ENST00000261037 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
COL8A1-201ENST00000261037 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
COL8A1-201ENST00000261037 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
COL8A1-201ENST00000261037 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
COL8A1-201ENST00000261037 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
COL8A1-201ENST00000261037 G3V3G9 751 aa15.12■□□□□ 0.01
COL8A1-201ENST00000261037 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
COL8A1-201ENST00000261037 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
COL8A1-201ENST00000261037 RASSF8Q8NHQ8 419 aa15.11■□□□□ 0.01
COL8A1-201ENST00000261037 PTMSP20962 102 aa15.11■□□□□ 0.01
COL8A1-201ENST00000261037 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
COL8A1-201ENST00000261037 HMMRO75330 724 aa15.1■□□□□ 0.01
COL8A1-201ENST00000261037 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
COL8A1-201ENST00000261037 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
COL8A1-201ENST00000261037 SYAP1Q96A49 352 aaPredicted RBP15.1■□□□□ 0.01
COL8A1-201ENST00000261037 TPM4P67936 248 aa15.09■□□□□ 0.01
COL8A1-201ENST00000261037 ELL2O00472 640 aaPredicted RBP15.09■□□□□ 0.01
COL8A1-201ENST00000261037 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
COL8A1-201ENST00000261037 GOLGA6L3A6NEY3 463 aa15.08■□□□□ 0.01
COL8A1-201ENST00000261037 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
COL8A1-201ENST00000261037 VPS53Q5VIR6 699 aa15.07■□□□□ 0
COL8A1-201ENST00000261037 PLIN1O60240 522 aa15.06■□□□□ 0
COL8A1-201ENST00000261037 RILPL2Q969X0 211 aa15.05■□□□□ 0
COL8A1-201ENST00000261037 NCAPD3P42695 1498 aa15.05■□□□□ 0
COL8A1-201ENST00000261037 JPH4Q96JJ6 628 aa15.05■□□□□ -0
COL8A1-201ENST00000261037 PANK3Q9H999 370 aa15.05■□□□□ -0
COL8A1-201ENST00000261037 PRM3Q9NNZ6 103 aa15.05■□□□□ -0
COL8A1-201ENST00000261037 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
COL8A1-201ENST00000261037 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
COL8A1-201ENST00000261037 FOXD4L6Q3SYB3 417 aaPredicted RBP15.04■□□□□ -0
COL8A1-201ENST00000261037 FOXD4L3Q6VB84 417 aaPredicted RBP15.04■□□□□ -0
COL8A1-201ENST00000261037 GTF2E1P29083 439 aaPredicted RBP15.04■□□□□ -0
COL8A1-201ENST00000261037 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
COL8A1-201ENST00000261037 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
COL8A1-201ENST00000261037 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
COL8A1-201ENST00000261037 NLRP13Q86W25 1043 aa15.04■□□□□ -0
COL8A1-201ENST00000261037 NGEFQ8N5V2 710 aa15.03■□□□□ -0
COL8A1-201ENST00000261037 SLC4A3P48751 1232 aa15.03■□□□□ -0
COL8A1-201ENST00000261037 KIF16BQ96L93 1317 aa15.02■□□□□ -0
COL8A1-201ENST00000261037 FGD5Q6ZNL6 1462 aa15.02□□□□□ -0.01
COL8A1-201ENST00000261037 KIF15Q9NS87 1388 aa15.02□□□□□ -0.01
COL8A1-201ENST00000261037 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
COL8A1-201ENST00000261037 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
COL8A1-201ENST00000261037 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
COL8A1-201ENST00000261037 MARCH6O60337 910 aa15□□□□□ -0.01
COL8A1-201ENST00000261037 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
COL8A1-201ENST00000261037 NECTIN2Q92692 538 aa15□□□□□ -0.01
COL8A1-201ENST00000261037 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
COL8A1-201ENST00000261037 ST18O60284 1047 aa15□□□□□ -0.01
COL8A1-201ENST00000261037 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
COL8A1-201ENST00000261037 PES1O00541 588 aaKnown RBP14.99□□□□□ -0.01
COL8A1-201ENST00000261037 SF3A1Q15459 793 aaKnown RBP14.99□□□□□ -0.01
COL8A1-201ENST00000261037 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
COL8A1-201ENST00000261037 H3BQV1 296 aa14.98□□□□□ -0.01
COL8A1-201ENST00000261037 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
COL8A1-201ENST00000261037 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
COL8A1-201ENST00000261037 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
COL8A1-201ENST00000261037 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
COL8A1-201ENST00000261037 EIF2S2P20042 333 aaKnown RBP14.97□□□□□ -0.01
COL8A1-201ENST00000261037 COG3Q96JB2 828 aa14.97□□□□□ -0.01
COL8A1-201ENST00000261037 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
COL8A1-201ENST00000261037 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
COL8A1-201ENST00000261037 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
COL8A1-201ENST00000261037 CCDC34Q96HJ3 373 aa14.96□□□□□ -0.01
COL8A1-201ENST00000261037 EVA1CP58658 441 aa14.96□□□□□ -0.01
COL8A1-201ENST00000261037 RSPH4AQ5TD94 716 aa14.96□□□□□ -0.01
COL8A1-201ENST00000261037 MSH5O43196 834 aa14.96□□□□□ -0.01
COL8A1-201ENST00000261037 RAD21O60216 631 aa14.95□□□□□ -0.02
COL8A1-201ENST00000261037 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
COL8A1-201ENST00000261037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
COL8A1-201ENST00000261037 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
COL8A1-201ENST00000261037 COG6Q9Y2V7 657 aa14.94□□□□□ -0.02
COL8A1-201ENST00000261037 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
COL8A1-201ENST00000261037 FAM184AQ8NB25 1140 aa14.93□□□□□ -0.02
COL8A1-201ENST00000261037 TPD52L1Q16890 204 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-201ENST00000261037 IGF1RP08069 1367 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 MCTP1Q6DN14 999 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 GOLGA6L1Q8N7Z2 621 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 PHF14O94880 888 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 ZKSCAN2Q63HK3 967 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 PTPRGP23470 1445 aa14.92□□□□□ -0.02
COL8A1-201ENST00000261037 TPM3P06753 285 aa14.91□□□□□ -0.02
COL8A1-201ENST00000261037 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
COL8A1-201ENST00000261037 CENPQQ7L2Z9 268 aaPredicted RBP14.91□□□□□ -0.02
COL8A1-201ENST00000261037 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
COL8A1-201ENST00000261037 EVC2Q86UK5 1308 aa14.91□□□□□ -0.02
COL8A1-201ENST00000261037 TTC5Q8N0Z6 440 aa14.9□□□□□ -0.02
COL8A1-201ENST00000261037 PDE4AP27815 886 aa14.9□□□□□ -0.02
COL8A1-201ENST00000261037 TEFQ10587 303 aa14.9□□□□□ -0.02
COL8A1-201ENST00000261037 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
COL8A1-201ENST00000261037 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 FAM161AQ3B820 660 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 DDX11L8A8MPP1 907 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 E9PSI1 815 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms