RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SHANK2Q9UPX8 1470 aa25.45■■□□□ 1.67
SSB-201ENST00000260956 PLXNC1O60486 1568 aa25.45■■□□□ 1.67
SSB-201ENST00000260956 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
SSB-201ENST00000260956 AGLP35573 1532 aa25.44■■□□□ 1.66
SSB-201ENST00000260956 ADAMTSL3P82987 1691 aa25.43■■□□□ 1.66
SSB-201ENST00000260956 NCOA1Q15788 1441 aa25.43■■□□□ 1.66
SSB-201ENST00000260956 ACIN1Q9UKV3 1341 aaKnown RBP25.4■■□□□ 1.66
SSB-201ENST00000260956 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
SSB-201ENST00000260956 PZPP20742 1482 aa25.38■■□□□ 1.65
SSB-201ENST00000260956 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
SSB-201ENST00000260956 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
SSB-201ENST00000260956 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
SSB-201ENST00000260956 KIF3BO15066 747 aa25.34■■□□□ 1.65
SSB-201ENST00000260956 GGT6Q6P531 493 aa25.34■■□□□ 1.65
SSB-201ENST00000260956 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
SSB-201ENST00000260956 ANKRD30AQ9BXX3 1397 aa25.33■■□□□ 1.65
SSB-201ENST00000260956 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
SSB-201ENST00000260956 PTPRMP28827 1452 aa25.31■■□□□ 1.64
SSB-201ENST00000260956 RPRD2Q5VT52 1461 aaKnown RBP25.29■■□□□ 1.64
SSB-201ENST00000260956 DUOX2Q9NRD8 1548 aa25.29■■□□□ 1.64
SSB-201ENST00000260956 KDM5DQ9BY66 1539 aa25.28■■□□□ 1.64
SSB-201ENST00000260956 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
SSB-201ENST00000260956 RIMS1Q86UR5 1692 aaKnown RBP25.27■■□□□ 1.64
SSB-201ENST00000260956 CEBPAP49715 358 aaPredicted RBP25.26■■□□□ 1.63
SSB-201ENST00000260956 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
SSB-201ENST00000260956 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
SSB-201ENST00000260956 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
SSB-201ENST00000260956 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
SSB-201ENST00000260956 ERBINQ96RT1 1412 aa25.22■■□□□ 1.63
SSB-201ENST00000260956 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
SSB-201ENST00000260956 MROH1Q8NDA8 1641 aa25.2■■□□□ 1.63
SSB-201ENST00000260956 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
SSB-201ENST00000260956 RNF17Q9BXT8 1623 aaKnown RBP25.17■■□□□ 1.62
SSB-201ENST00000260956 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
SSB-201ENST00000260956 ESF1Q9H501 851 aaKnown RBP25.16■■□□□ 1.62
SSB-201ENST00000260956 PPP6R1Q9UPN7 881 aa25.16■■□□□ 1.62
SSB-201ENST00000260956 WASHC2CQ9Y4E1 1318 aa25.15■■□□□ 1.62
SSB-201ENST00000260956 FOXD1Q16676 465 aa25.15■■□□□ 1.62
SSB-201ENST00000260956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.627e-7■■■□□ 16.1
SSB-201ENST00000260956 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
SSB-201ENST00000260956 CNTLNQ9NXG0 1405 aa25.14■■□□□ 1.61
SSB-201ENST00000260956 C3P01024 1663 aa25.11■■□□□ 1.61
SSB-201ENST00000260956 DEPDC5O75140 1603 aa25.1■■□□□ 1.61
SSB-201ENST00000260956 ABCC3O15438 1527 aa25.1■■□□□ 1.61
SSB-201ENST00000260956 PRDM15P57071 1507 aaPredicted RBP25.1■■□□□ 1.61
SSB-201ENST00000260956 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
SSB-201ENST00000260956 UNC13BO14795 1591 aa25.09■■□□□ 1.61
SSB-201ENST00000260956 L3MBTL2Q969R5 705 aa25.09■■□□□ 1.61
SSB-201ENST00000260956 FBXO31Q5XUX0 539 aaPredicted RBP25.07■■□□□ 1.6
SSB-201ENST00000260956 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
SSB-201ENST00000260956 MROH2AA6NES4 1674 aa25.06■■□□□ 1.6
SSB-201ENST00000260956 VWDEQ8N2E2 1590 aa25.05■■□□□ 1.6
SSB-201ENST00000260956 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
SSB-201ENST00000260956 CEP152O94986 1710 aa25.02■■□□□ 1.6
SSB-201ENST00000260956 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
SSB-201ENST00000260956 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
SSB-201ENST00000260956 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
SSB-201ENST00000260956 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
SSB-201ENST00000260956 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
SSB-201ENST00000260956 KANK1Q14678 1352 aa24.98■■□□□ 1.59
SSB-201ENST00000260956 LMTK3Q96Q04 1460 aa24.98■■□□□ 1.59
SSB-201ENST00000260956 ZC3H13Q5T200 1668 aaKnown RBP24.97■■□□□ 1.59
SSB-201ENST00000260956 NUP155O75694 1391 aa24.97■■□□□ 1.59
SSB-201ENST00000260956 LMTK2Q8IWU2 1503 aa24.97■■□□□ 1.59
SSB-201ENST00000260956 NPATQ14207 1427 aa24.97■■□□□ 1.59
SSB-201ENST00000260956 PKD2Q13563 968 aa24.96■■□□□ 1.59
SSB-201ENST00000260956 IQGAP3Q86VI3 1631 aa24.96■■□□□ 1.59
SSB-201ENST00000260956 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.59
SSB-201ENST00000260956 HSPA5P11021 654 aaKnown RBP24.94■■□□□ 1.58
SSB-201ENST00000260956 GTF3C3Q9Y5Q9 886 aa24.94■■□□□ 1.58
SSB-201ENST00000260956 ARHGAP31Q2M1Z3 1444 aa24.93■■□□□ 1.58
SSB-201ENST00000260956 HSPA2P54652 639 aa24.93■■□□□ 1.58
SSB-201ENST00000260956 UHRF1BP1Q6BDS2 1440 aa24.92■■□□□ 1.58
SSB-201ENST00000260956 SETD1BQ9UPS6 1966 aaKnown RBP24.9■■□□□ 1.58
SSB-201ENST00000260956 ERVK-7P63135 1459 aa24.89■■□□□ 1.58
SSB-201ENST00000260956 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.58
SSB-201ENST00000260956 WASHC2AQ641Q2 1341 aa24.89■■□□□ 1.57
SSB-201ENST00000260956 TNRQ92752 1358 aa24.89■■□□□ 1.57
SSB-201ENST00000260956 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
SSB-201ENST00000260956 PREX1Q8TCU6 1659 aa24.87■■□□□ 1.57
SSB-201ENST00000260956 SPATA31D1Q6ZQQ2 1576 aa24.87■■□□□ 1.57
SSB-201ENST00000260956 EIF4G2P78344 907 aaKnown RBP eCLIP24.86■■□□□ 1.57
SSB-201ENST00000260956 RALGAPBQ86X10 1494 aa24.84■■□□□ 1.57
SSB-201ENST00000260956 TET3O43151 1660 aa24.84■■□□□ 1.57
SSB-201ENST00000260956 CCER2I3L3R5 266 aa24.83■■□□□ 1.57
SSB-201ENST00000260956 PLA2R1Q13018 1463 aa24.83■■□□□ 1.57
SSB-201ENST00000260956 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.56
SSB-201ENST00000260956 NOS1P29475 1434 aa24.81■■□□□ 1.56
SSB-201ENST00000260956 E9PCH4 1651 aa24.81■■□□□ 1.56
SSB-201ENST00000260956 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
SSB-201ENST00000260956 SYNMO15061 1565 aa24.78■■□□□ 1.56
SSB-201ENST00000260956 CEP170BQ9Y4F5 1589 aaPredicted RBP24.78■■□□□ 1.56
SSB-201ENST00000260956 C11orf95C9JLR9 678 aaPredicted RBP24.77■■□□□ 1.56
SSB-201ENST00000260956 IDI1Q13907 227 aa24.77■■□□□ 1.56
SSB-201ENST00000260956 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
SSB-201ENST00000260956 NLRP1Q9C000 1473 aa24.75■■□□□ 1.55
SSB-201ENST00000260956 ZNF142P52746 1687 aaPredicted RBP24.74■■□□□ 1.55
SSB-201ENST00000260956 ANP32CO43423 234 aa24.72■■□□□ 1.55
SSB-201ENST00000260956 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
SSB-201ENST00000260956 TRPM1Q7Z4N2 1603 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms