RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
FDX1-201ENST00000260270 PLA2R1Q13018 1463 aa22.8■■□□□ 1.24
FDX1-201ENST00000260270 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
FDX1-201ENST00000260270 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
FDX1-201ENST00000260270 KIF7Q2M1P5 1343 aa22.8■■□□□ 1.24
FDX1-201ENST00000260270 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
FDX1-201ENST00000260270 KIF15Q9NS87 1388 aa22.78■■□□□ 1.24
FDX1-201ENST00000260270 INSRP06213 1382 aa22.77■■□□□ 1.24
FDX1-201ENST00000260270 PRKRIP1Q9H875 184 aaPredicted RBP22.77■■□□□ 1.24
FDX1-201ENST00000260270 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
FDX1-201ENST00000260270 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
FDX1-201ENST00000260270 PRAG1Q86YV5 1406 aa22.75■■□□□ 1.23
FDX1-201ENST00000260270 USP47Q96K76 1375 aa22.73■■□□□ 1.23
FDX1-201ENST00000260270 PLEKHD1A6NEE1 506 aa22.73■■□□□ 1.23
FDX1-201ENST00000260270 ZFYVE16Q7Z3T8 1539 aa22.73■■□□□ 1.23
FDX1-201ENST00000260270 RTEL1-TNFRSF6BF6WH68 1400 aa22.73■■□□□ 1.23
FDX1-201ENST00000260270 PLCH2O75038 1416 aa22.73■■□□□ 1.23
FDX1-201ENST00000260270 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
FDX1-201ENST00000260270 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
FDX1-201ENST00000260270 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
FDX1-201ENST00000260270 TET3O43151 1660 aa22.71■■□□□ 1.23
FDX1-201ENST00000260270 TRPM2O94759 1503 aa22.71■■□□□ 1.23
FDX1-201ENST00000260270 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.23
FDX1-201ENST00000260270 FKBP8Q14318 412 aa22.7■■□□□ 1.22
FDX1-201ENST00000260270 ARHGAP5Q13017 1502 aa22.69■■□□□ 1.22
FDX1-201ENST00000260270 A2MP01023 1474 aa22.68■■□□□ 1.22
FDX1-201ENST00000260270 FOXD1Q16676 465 aa22.67■■□□□ 1.22
FDX1-201ENST00000260270 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
FDX1-201ENST00000260270 COL17A1Q9UMD9 1497 aaPredicted RBP22.66■■□□□ 1.22
FDX1-201ENST00000260270 MROH1Q8NDA8 1641 aa22.66■■□□□ 1.22
FDX1-201ENST00000260270 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
FDX1-201ENST00000260270 NUP155O75694 1391 aa22.64■■□□□ 1.21
FDX1-201ENST00000260270 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
FDX1-201ENST00000260270 PTPRTO14522 1441 aa22.63■■□□□ 1.21
FDX1-201ENST00000260270 PKD2Q13563 968 aa22.63■■□□□ 1.21
FDX1-201ENST00000260270 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
FDX1-201ENST00000260270 MYOM1P52179 1685 aa22.58■■□□□ 1.21
FDX1-201ENST00000260270 LMTK2Q8IWU2 1503 aa22.58■■□□□ 1.2
FDX1-201ENST00000260270 RBM19Q9Y4C8 960 aaKnown RBP22.57■■□□□ 1.2
FDX1-201ENST00000260270 SCAPERQ9BY12 1400 aa22.54■■□□□ 1.2
FDX1-201ENST00000260270 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
FDX1-201ENST00000260270 SYNMO15061 1565 aa22.53■■□□□ 1.2
FDX1-201ENST00000260270 CCDC184Q52MB2 194 aa22.53■■□□□ 1.2
FDX1-201ENST00000260270 PARD3Q8TEW0 1356 aa22.52■■□□□ 1.2
FDX1-201ENST00000260270 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
FDX1-201ENST00000260270 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
FDX1-201ENST00000260270 CCDC144AA2RUR9 1427 aa22.51■■□□□ 1.19
FDX1-201ENST00000260270 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
FDX1-201ENST00000260270 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
FDX1-201ENST00000260270 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
FDX1-201ENST00000260270 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
FDX1-201ENST00000260270 WASHC2CQ9Y4E1 1318 aa22.49■■□□□ 1.19
FDX1-201ENST00000260270 NRXN1Q9ULB1 1477 aa22.48■■□□□ 1.19
FDX1-201ENST00000260270 NEFLP07196 543 aa22.48■■□□□ 1.19
FDX1-201ENST00000260270 ZC3H13Q5T200 1668 aaKnown RBP22.48■■□□□ 1.19
FDX1-201ENST00000260270 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
FDX1-201ENST00000260270 MYOM2P54296 1465 aa22.47■■□□□ 1.19
FDX1-201ENST00000260270 PRKCSHP14314 528 aaPredicted RBP22.45■■□□□ 1.18
FDX1-201ENST00000260270 KIDINS220Q9ULH0 1771 aa22.45■■□□□ 1.18
FDX1-201ENST00000260270 BLMP54132 1417 aaPredicted RBP22.43■■□□□ 1.18
FDX1-201ENST00000260270 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.18
FDX1-201ENST00000260270 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
FDX1-201ENST00000260270 EFCAB6Q5THR3 1501 aa22.43■■□□□ 1.18
FDX1-201ENST00000260270 MAP3K4Q9Y6R4 1608 aa22.42■■□□□ 1.18
FDX1-201ENST00000260270 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
FDX1-201ENST00000260270 TRAPPC8Q9Y2L5 1435 aa22.42■■□□□ 1.18
FDX1-201ENST00000260270 SETBP1Q9Y6X0 1596 aa22.41■■□□□ 1.18
FDX1-201ENST00000260270 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
FDX1-201ENST00000260270 KIF1BO60333 1816 aa22.38■■□□□ 1.17
FDX1-201ENST00000260270 RALBP1Q15311 655 aa22.37■■□□□ 1.17
FDX1-201ENST00000260270 MROH2AA6NES4 1674 aa22.37■■□□□ 1.17
FDX1-201ENST00000260270 PPRC1Q5VV67 1664 aaKnown RBP22.37■■□□□ 1.17
FDX1-201ENST00000260270 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
FDX1-201ENST00000260270 ABCA6Q8N139 1617 aa22.36■■□□□ 1.17
FDX1-201ENST00000260270 FBLN2P98095 1184 aa22.36■■□□□ 1.17
FDX1-201ENST00000260270 PER1O15534 1290 aaPredicted RBP22.35■■□□□ 1.17
FDX1-201ENST00000260270 TESK2Q96S53 571 aa22.35■■□□□ 1.17
FDX1-201ENST00000260270 USP32Q8NFA0 1604 aa22.35■■□□□ 1.17
FDX1-201ENST00000260270 MSH5O43196 834 aa22.35■■□□□ 1.17
FDX1-201ENST00000260270 PPLO60437 1756 aa22.34■■□□□ 1.17
FDX1-201ENST00000260270 MYBBP1AQ9BQG0 1328 aaKnown RBP22.34■■□□□ 1.17
FDX1-201ENST00000260270 ADGRB3O60242 1522 aa22.34■■□□□ 1.17
FDX1-201ENST00000260270 PIK3C2BO00750 1634 aa22.33■■□□□ 1.17
FDX1-201ENST00000260270 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.17
FDX1-201ENST00000260270 MRS2Q9HD23 443 aa22.33■■□□□ 1.17
FDX1-201ENST00000260270 NPC1L1Q9UHC9 1359 aa22.32■■□□□ 1.16
FDX1-201ENST00000260270 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
FDX1-201ENST00000260270 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
FDX1-201ENST00000260270 FRMPD1Q5SYB0 1578 aa22.31■■□□□ 1.16
FDX1-201ENST00000260270 HECW2Q9P2P5 1572 aa22.3■■□□□ 1.16
FDX1-201ENST00000260270 FANCAO15360 1455 aa22.3■■□□□ 1.16
FDX1-201ENST00000260270 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
FDX1-201ENST00000260270 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
FDX1-201ENST00000260270 ZNF518AQ6AHZ1 1483 aa22.29■■□□□ 1.16
FDX1-201ENST00000260270 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
FDX1-201ENST00000260270 NUDCQ9Y266 331 aa22.27■■□□□ 1.15
FDX1-201ENST00000260270 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
FDX1-201ENST00000260270 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
FDX1-201ENST00000260270 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
FDX1-201ENST00000260270 MLH3Q9UHC1 1453 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms