RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TSHZ2Q9NRE2 1034 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 HECW1Q76N89 1606 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 ROCK1Q13464 1354 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
RC3H1-201ENST00000258349 NLRP13Q86W25 1043 aa5.94□□□□□ -1.46
RC3H1-201ENST00000258349 MYBBP1AQ9BQG0 1328 aaKnown RBP5.93□□□□□ -1.46
RC3H1-201ENST00000258349 NUP155O75694 1391 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 ISY1Q9ULR0 285 aaKnown RBP5.93□□□□□ -1.46
RC3H1-201ENST00000258349 CTTNBP2Q8WZ74 1663 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 TPM1P09493 284 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 U2AF1L5P0DN76 240 aaPredicted RBP5.93□□□□□ -1.46
RC3H1-201ENST00000258349 U2AF1Q01081 240 aaKnown RBP eCLIP5.93□□□□□ -1.462e-7■■■□□ 15
RC3H1-201ENST00000258349 PKD2Q13563 968 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 TERF2IPQ9NYB0 399 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 TEX35Q5T0J7 233 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 APBB1O00213 710 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 FAM161AQ3B820 660 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 CECR2Q9BXF3 1484 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 FANCIQ9NVI1 1328 aa5.93□□□□□ -1.46
RC3H1-201ENST00000258349 TPM2P07951 284 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.92□□□□□ -1.46
RC3H1-201ENST00000258349 CCDC144AA2RUR9 1427 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 GOLGA6L19H0YKK7 550 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 MPHOSPH9Q99550 1183 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 PDS5BQ9NTI5 1447 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 GSE1Q14687 1217 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 H3BQV1 296 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 IFFO2Q5TF58 517 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 GORABQ5T7V8 394 aa5.92□□□□□ -1.46
RC3H1-201ENST00000258349 RASSF8Q8NHQ8 419 aa5.91□□□□□ -1.46
RC3H1-201ENST00000258349 HOOK1Q9UJC3 728 aaKnown RBP5.91□□□□□ -1.46
RC3H1-201ENST00000258349 LRRFIP1Q32MZ4 808 aaKnown RBP5.91□□□□□ -1.46
RC3H1-201ENST00000258349 ERICH3Q5RHP9 1530 aa5.9□□□□□ -1.46
RC3H1-201ENST00000258349 TPD52L1Q16890 204 aaPredicted RBP5.9□□□□□ -1.46
RC3H1-201ENST00000258349 TMX4Q9H1E5 349 aaPredicted RBP5.9□□□□□ -1.46
RC3H1-201ENST00000258349 ITSN2Q9NZM3 1697 aa5.9□□□□□ -1.46
RC3H1-201ENST00000258349 NOM1Q5C9Z4 860 aaKnown RBP5.9□□□□□ -1.46
RC3H1-201ENST00000258349 CEP89Q96ST8 783 aa5.9□□□□□ -1.46
RC3H1-201ENST00000258349 USP47Q96K76 1375 aa5.9□□□□□ -1.46
RC3H1-201ENST00000258349 CGNL1Q0VF96 1302 aa5.9□□□□□ -1.47
RC3H1-201ENST00000258349 MTERF4Q7Z6M4 381 aaKnown RBP5.9□□□□□ -1.47
RC3H1-201ENST00000258349 REC8O95072 547 aa5.9□□□□□ -1.47
RC3H1-201ENST00000258349 ZNF771Q7L3S4 317 aaPredicted RBP5.9□□□□□ -1.47
RC3H1-201ENST00000258349 CUL7Q14999 1698 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 KIF21AQ7Z4S6 1674 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 E9PSI1 815 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
RC3H1-201ENST00000258349 SF3A1Q15459 793 aaKnown RBP5.89□□□□□ -1.47
RC3H1-201ENST00000258349 CHMP3Q9Y3E7 222 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 AAMPQ13685 434 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 FOXD1Q16676 465 aa5.89□□□□□ -1.47
RC3H1-201ENST00000258349 RSPH4AQ5TD94 716 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 SAFB2Q14151 953 aaKnown RBP eCLIP5.88□□□□□ -1.47
RC3H1-201ENST00000258349 NGEFQ8N5V2 710 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 FHOD3Q2V2M9 1422 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 AK7Q96M32 723 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 STK26Q9P289 416 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 EFCAB5A4FU69 1503 aa5.88□□□□□ -1.47
RC3H1-201ENST00000258349 EHBP1L1Q8N3D4 1523 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 BECN2A8MW95 431 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 RUFY2Q8WXA3 655 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 FYCO1Q9BQS8 1478 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 SOX12O15370 315 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 PDE4AP27815 886 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 DDX49Q9Y6V7 483 aaKnown RBP5.87□□□□□ -1.47
RC3H1-201ENST00000258349 SCAPERQ9BY12 1400 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 CREBRFQ8IUR6 639 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 PAK3O75914 559 aaPredicted RBP5.87□□□□□ -1.47
RC3H1-201ENST00000258349 CCDC146Q8IYE0 955 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 FAM184AQ8NB25 1140 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 ACBD3Q9H3P7 528 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 MAP7D2Q96T17 732 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 FOXD4L1Q9NU39 408 aa5.87□□□□□ -1.47
RC3H1-201ENST00000258349 AKAP17AQ02040 695 aaKnown RBP5.87□□□□□ -1.47
RC3H1-201ENST00000258349 CCAR2Q8N163 923 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 AK9Q5TCS8 1911 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 CALRP27797 417 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 IPO7O95373 1038 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 NCBP3Q53F19 620 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 ARGLU1Q9NWB6 273 aaPredicted RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 NOL8Q76FK4 1167 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 CNTLNQ9NXG0 1405 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 PES1O00541 588 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 KANK4Q5T7N3 995 aaPredicted RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 NAT10Q9H0A0 1025 aaKnown RBP5.86□□□□□ -1.47
RC3H1-201ENST00000258349 NINLQ9Y2I6 1382 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 DIAPH3Q9NSV4 1193 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 CCDC39Q9UFE4 941 aa5.86□□□□□ -1.47
RC3H1-201ENST00000258349 DHX57Q6P158 1386 aaKnown RBP5.85□□□□□ -1.47
RC3H1-201ENST00000258349 SLC4A10Q6U841 1118 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 DDX19BQ9UMR2 479 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 TOP2BQ02880 1626 aa5.85□□□□□ -1.47
RC3H1-201ENST00000258349 FOXD4L5Q5VV16 416 aaPredicted RBP5.85□□□□□ -1.47
RC3H1-201ENST00000258349 FOXD4L4Q8WXT5 416 aaPredicted RBP5.85□□□□□ -1.47
RC3H1-201ENST00000258349 MIA2Q96PC5 1412 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms