RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 B4GALNT3Q6L9W6 998 aa33.71■■■□□ 2.99
LMO2-201ENST00000257818 KDM5DQ9BY66 1539 aa33.71■■■□□ 2.99
LMO2-201ENST00000257818 ABCC1P33527 1531 aa33.67■■■□□ 2.98
LMO2-201ENST00000257818 TRAPPC8Q9Y2L5 1435 aa33.64■■■□□ 2.98
LMO2-201ENST00000257818 PLXNC1O60486 1568 aa33.63■■■□□ 2.97
LMO2-201ENST00000257818 ASXL2Q76L83 1435 aa33.62■■■□□ 2.97
LMO2-201ENST00000257818 DHX29Q7Z478 1369 aaKnown RBP33.61■■■□□ 2.97
LMO2-201ENST00000257818 ERICH6Q7L0X2 663 aa33.6■■■□□ 2.97
LMO2-201ENST00000257818 FAM135AQ9P2D6 1515 aa33.59■■■□□ 2.97
LMO2-201ENST00000257818 ARAP3Q8WWN8 1544 aa33.58■■■□□ 2.97
LMO2-201ENST00000257818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.56■■■□□ 2.96
LMO2-201ENST00000257818 BCORL1Q5H9F3 1711 aa33.56■■■□□ 2.96
LMO2-201ENST00000257818 SMG6Q86US8 1419 aaKnown RBP33.56■■■□□ 2.96
LMO2-201ENST00000257818 ABCA9Q8IUA7 1624 aa33.56■■■□□ 2.96
LMO2-201ENST00000257818 AFAP1Q8N556 730 aa33.55■■■□□ 2.96
LMO2-201ENST00000257818 DUOX2Q9NRD8 1548 aa33.54■■■□□ 2.96
LMO2-201ENST00000257818 UNC13BO14795 1591 aa33.53■■■□□ 2.96
LMO2-201ENST00000257818 NPM1P06748 294 aaKnown RBP eCLIP33.52■■■□□ 2.96
LMO2-201ENST00000257818 FANCAO15360 1455 aa33.51■■■□□ 2.96
LMO2-201ENST00000257818 USP47Q96K76 1375 aa33.5■■■□□ 2.95
LMO2-201ENST00000257818 SPAG9O60271 1321 aaKnown RBP33.49■■■□□ 2.95
LMO2-201ENST00000257818 ERBINQ96RT1 1412 aa33.46■■■□□ 2.95
LMO2-201ENST00000257818 ZNF326Q5BKZ1 582 aaKnown RBP33.45■■■□□ 2.94
LMO2-201ENST00000257818 KDM5CP41229 1560 aa33.44■■■□□ 2.94
LMO2-201ENST00000257818 NUDCQ9Y266 331 aa33.44■■■□□ 2.94
LMO2-201ENST00000257818 RNF123Q5XPI4 1314 aa33.44■■■□□ 2.94
LMO2-201ENST00000257818 CNGB1Q14028 1251 aaPredicted RBP33.43■■■□□ 2.94
LMO2-201ENST00000257818 IQGAP3Q86VI3 1631 aa33.41■■■□□ 2.94
LMO2-201ENST00000257818 ZFYVE16Q7Z3T8 1539 aa33.41■■■□□ 2.94
LMO2-201ENST00000257818 RTEL1-TNFRSF6BF6WH68 1400 aa33.4■■■□□ 2.94
LMO2-201ENST00000257818 POLR3GLQ9BT43 218 aa33.4■■■□□ 2.94
LMO2-201ENST00000257818 ADGRL1O94910 1474 aa33.39■■■□□ 2.94
LMO2-201ENST00000257818 SCAPERQ9BY12 1400 aa33.38■■■□□ 2.93
LMO2-201ENST00000257818 ARID4BQ4LE39 1312 aaPredicted RBP33.37■■■□□ 2.93
LMO2-201ENST00000257818 MAGI2Q86UL8 1455 aa33.36■■■□□ 2.93
LMO2-201ENST00000257818 KDM2AQ9Y2K7 1162 aa33.33■■■□□ 2.93
LMO2-201ENST00000257818 PLA2R1Q13018 1463 aa33.33■■■□□ 2.93
LMO2-201ENST00000257818 PNISRQ8TF01 805 aaKnown RBP33.32■■■□□ 2.93
LMO2-201ENST00000257818 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
LMO2-201ENST00000257818 CCDC144AA2RUR9 1427 aa33.32■■■□□ 2.92
LMO2-201ENST00000257818 UHRF1BP1Q6BDS2 1440 aa33.31■■■□□ 2.92
LMO2-201ENST00000257818 ATP7AQ04656 1500 aa33.31■■■□□ 2.92
LMO2-201ENST00000257818 DCAF11Q8TEB1 546 aa33.3■■■□□ 2.92
LMO2-201ENST00000257818 INO80Q9ULG1 1556 aaPredicted RBP33.3■■■□□ 2.92
LMO2-201ENST00000257818 RALGAPBQ86X10 1494 aa33.29■■■□□ 2.92
LMO2-201ENST00000257818 SENP3-EIF4A1A0A087X0R7 540 aa33.27■■■□□ 2.92
LMO2-201ENST00000257818 ROCK2O75116 1388 aaKnown RBP33.26■■■□□ 2.91
LMO2-201ENST00000257818 CCDC136Q96JN2 1154 aa33.26■■■□□ 2.91
LMO2-201ENST00000257818 CD109Q6YHK3 1445 aa33.26■■■□□ 2.91
LMO2-201ENST00000257818 NOP58Q9Y2X3 529 aaKnown RBP33.25■■■□□ 2.91
LMO2-201ENST00000257818 RGL3Q3MIN7 710 aa33.22■■■□□ 2.91
LMO2-201ENST00000257818 TMC1Q8TDI8 760 aa33.22■■■□□ 2.91
LMO2-201ENST00000257818 PAK3O75914 559 aaPredicted RBP33.2■■■□□ 2.91
LMO2-201ENST00000257818 CARD11Q9BXL7 1154 aa33.19■■■□□ 2.9
LMO2-201ENST00000257818 LRPPRCP42704 1394 aaKnown RBP33.19■■■□□ 2.9
LMO2-201ENST00000257818 CYB5RLQ6IPT4 315 aa33.16■■■□□ 2.9
LMO2-201ENST00000257818 KIF3BO15066 747 aa33.16■■■□□ 2.9
LMO2-201ENST00000257818 DEPDC5O75140 1603 aa33.15■■■□□ 2.9
LMO2-201ENST00000257818 ATP10AO60312 1499 aa33.15■■■□□ 2.9
LMO2-201ENST00000257818 KIDINS220Q9ULH0 1771 aa33.14■■■□□ 2.9
LMO2-201ENST00000257818 E9PCH4 1651 aa33.14■■■□□ 2.9
LMO2-201ENST00000257818 ZNF518AQ6AHZ1 1483 aa33.13■■■□□ 2.89
LMO2-201ENST00000257818 ST20-MTHFSA0A0A6YYL1 179 aa33.12■■■□□ 2.89
LMO2-201ENST00000257818 CFAP74Q9C0B2 1584 aa33.11■■■□□ 2.89
LMO2-201ENST00000257818 BRD4O60885 1362 aaPredicted RBP33.1■■■□□ 2.89
LMO2-201ENST00000257818 DEKP35659 375 aaKnown RBP33.1■■■□□ 2.89
LMO2-201ENST00000257818 A2MP01023 1474 aa33.1■■■□□ 2.89
LMO2-201ENST00000257818 MYBBP1AQ9BQG0 1328 aaKnown RBP33.09■■■□□ 2.89
LMO2-201ENST00000257818 PRAG1Q86YV5 1406 aa33.07■■■□□ 2.88
LMO2-201ENST00000257818 KANK1Q14678 1352 aa33.06■■■□□ 2.88
LMO2-201ENST00000257818 KTN1Q86UP2 1357 aaKnown RBP33.06■■■□□ 2.88
LMO2-201ENST00000257818 POGZQ7Z3K3 1410 aa33.06■■■□□ 2.88
LMO2-201ENST00000257818 EIF2AK4Q9P2K8 1649 aaKnown RBP33.05■■■□□ 2.88
LMO2-201ENST00000257818 RALBP1Q15311 655 aa33.04■■■□□ 2.88
LMO2-201ENST00000257818 IPO9Q96P70 1041 aaKnown RBP33.04■■■□□ 2.88
LMO2-201ENST00000257818 VWDEQ8N2E2 1590 aa33.03■■■□□ 2.88
LMO2-201ENST00000257818 ANP32AP39687 249 aaKnown RBP33.03■■■□□ 2.88
LMO2-201ENST00000257818 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
LMO2-201ENST00000257818 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
LMO2-201ENST00000257818 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
LMO2-201ENST00000257818 TET3O43151 1660 aa33.02■■■□□ 2.88
LMO2-201ENST00000257818 NBR1Q14596 966 aa33.02■■■□□ 2.88
LMO2-201ENST00000257818 TRPM1Q7Z4N2 1603 aa33.01■■■□□ 2.88
LMO2-201ENST00000257818 MROH1Q8NDA8 1641 aa33.01■■■□□ 2.87
LMO2-201ENST00000257818 RRP1P56182 461 aaKnown RBP32.99■■■□□ 2.87
LMO2-201ENST00000257818 PRDM15P57071 1507 aaPredicted RBP32.99■■■□□ 2.87
LMO2-201ENST00000257818 SPHKAPQ2M3C7 1700 aa32.99■■■□□ 2.87
LMO2-201ENST00000257818 NBPF1Q3BBV0 1214 aa32.98■■■□□ 2.87
LMO2-201ENST00000257818 TRPM2O94759 1503 aa32.97■■■□□ 2.87
LMO2-201ENST00000257818 PTPRTO14522 1441 aa32.97■■■□□ 2.87
LMO2-201ENST00000257818 RAPGEF3O95398 923 aa32.95■■■□□ 2.87
LMO2-201ENST00000257818 MLH3Q9UHC1 1453 aa32.95■■■□□ 2.87
LMO2-201ENST00000257818 NEO1Q92859 1461 aa32.95■■■□□ 2.86
LMO2-201ENST00000257818 HECW2Q9P2P5 1572 aa32.93■■■□□ 2.86
LMO2-201ENST00000257818 EXOC6Q8TAG9 804 aa32.93■■■□□ 2.86
LMO2-201ENST00000257818 CLTCL1P53675 1640 aa32.92■■■□□ 2.86
LMO2-201ENST00000257818 PARD3Q8TEW0 1356 aa32.91■■■□□ 2.86
LMO2-201ENST00000257818 RCAN3Q9UKA8 241 aa32.9■■■□□ 2.86
LMO2-201ENST00000257818 MAP3K4Q9Y6R4 1608 aa32.89■■■□□ 2.86
LMO2-201ENST00000257818 CEP152O94986 1710 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms