RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 MAFGO15525 162 aa9.71□□□□□ -0.86
USP29-201ENST00000254181 CDCA8Q53HL2 280 aa9.7□□□□□ -0.86
USP29-201ENST00000254181 TMEM51Q9NW97 253 aa9.7□□□□□ -0.86
USP29-201ENST00000254181 DMTNQ08495 405 aa9.7□□□□□ -0.86
USP29-201ENST00000254181 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
USP29-201ENST00000254181 TMTC2Q8N394 836 aa9.7□□□□□ -0.86
USP29-201ENST00000254181 KIF20AO95235 890 aa9.69□□□□□ -0.86
USP29-201ENST00000254181 LETM1O95202 739 aaPredicted RBP9.69□□□□□ -0.86
USP29-201ENST00000254181 KCNJ4P48050 445 aa9.69□□□□□ -0.86
USP29-201ENST00000254181 EXOC6Q8TAG9 804 aa9.69□□□□□ -0.86
USP29-201ENST00000254181 HDAC5Q9UQL6 1122 aa9.69□□□□□ -0.86
USP29-201ENST00000254181 NOL8Q76FK4 1167 aaKnown RBP9.68□□□□□ -0.86
USP29-201ENST00000254181 HSP90AB4PQ58FF6 505 aa9.68□□□□□ -0.86
USP29-201ENST00000254181 ZNF622Q969S3 477 aaKnown RBP eCLIP9.68□□□□□ -0.86
USP29-201ENST00000254181 UPF2Q9HAU5 1272 aaKnown RBP9.68□□□□□ -0.86
USP29-201ENST00000254181 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
USP29-201ENST00000254181 AKNAQ7Z591 1439 aa9.67□□□□□ -0.86
USP29-201ENST00000254181 BRD1O95696 1058 aa9.67□□□□□ -0.86
USP29-201ENST00000254181 ZBED9Q6R2W3 1325 aa9.67□□□□□ -0.86
USP29-201ENST00000254181 UTP14CQ5TAP6 766 aaKnown RBP9.67□□□□□ -0.86
USP29-201ENST00000254181 GRPEL1Q9HAV7 217 aa9.67□□□□□ -0.86
USP29-201ENST00000254181 PHF14O94880 888 aa9.66□□□□□ -0.86
USP29-201ENST00000254181 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
USP29-201ENST00000254181 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
USP29-201ENST00000254181 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
USP29-201ENST00000254181 LOC102724159A0A0B4J2E5 919 aa9.65□□□□□ -0.86
USP29-201ENST00000254181 PWP2Q15269 919 aaKnown RBP9.65□□□□□ -0.86
USP29-201ENST00000254181 SKAP1Q86WV1 359 aa9.65□□□□□ -0.87
USP29-201ENST00000254181 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
USP29-201ENST00000254181 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
USP29-201ENST00000254181 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
USP29-201ENST00000254181 EXOC8Q8IYI6 725 aa9.63□□□□□ -0.87
USP29-201ENST00000254181 ZBTB9Q96C00 473 aa9.63□□□□□ -0.87
USP29-201ENST00000254181 SGSM3Q96HU1 749 aa9.63□□□□□ -0.87
USP29-201ENST00000254181 ZSCAN30Q86W11 494 aa9.62□□□□□ -0.87
USP29-201ENST00000254181 TRAK2O60296 914 aa9.62□□□□□ -0.87
USP29-201ENST00000254181 PKD2Q13563 968 aa9.62□□□□□ -0.87
USP29-201ENST00000254181 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
USP29-201ENST00000254181 TRERF1Q96PN7 1200 aa9.61□□□□□ -0.87
USP29-201ENST00000254181 TONSLQ96HA7 1378 aa9.61□□□□□ -0.87
USP29-201ENST00000254181 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
USP29-201ENST00000254181 OFD1O75665 1012 aa9.61□□□□□ -0.87
USP29-201ENST00000254181 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
USP29-201ENST00000254181 RIPK4P57078 832 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 TRIM6-TRIM34B2RNG4 842 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 DYNC1I1O14576 645 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
USP29-201ENST00000254181 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 XPCQ01831 940 aaPredicted RBP9.6□□□□□ -0.87
USP29-201ENST00000254181 MPNDQ8N594 471 aa9.6□□□□□ -0.87
USP29-201ENST00000254181 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
USP29-201ENST00000254181 CHMP4CQ96CF2 233 aa9.59□□□□□ -0.87
USP29-201ENST00000254181 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
USP29-201ENST00000254181 NACADO15069 1562 aa9.58□□□□□ -0.88
USP29-201ENST00000254181 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
USP29-201ENST00000254181 NASPP49321 788 aaPredicted RBP9.57□□□□□ -0.88
USP29-201ENST00000254181 RCAN3Q9UKA8 241 aa9.57□□□□□ -0.88
USP29-201ENST00000254181 ZSCAN20P17040 1043 aaPredicted RBP9.56□□□□□ -0.88
USP29-201ENST00000254181 RRP1P56182 461 aaKnown RBP9.56□□□□□ -0.88
USP29-201ENST00000254181 CCDC173Q0VFZ6 552 aa9.56□□□□□ -0.88
USP29-201ENST00000254181 RIPOR2Q9Y4F9 1068 aa9.56□□□□□ -0.88
USP29-201ENST00000254181 MCM4P33991 863 aa9.56□□□□□ -0.88
USP29-201ENST00000254181 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
USP29-201ENST00000254181 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
USP29-201ENST00000254181 GOLGA6L22H0YM25 854 aa9.55□□□□□ -0.88
USP29-201ENST00000254181 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
USP29-201ENST00000254181 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
USP29-201ENST00000254181 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
USP29-201ENST00000254181 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
USP29-201ENST00000254181 ARMCX6Q7L4S7 300 aa9.54□□□□□ -0.88
USP29-201ENST00000254181 TNIKQ9UKE5 1360 aa9.54□□□□□ -0.88
USP29-201ENST00000254181 AXDND1Q5T1B0 1012 aaPredicted RBP9.53□□□□□ -0.88
USP29-201ENST00000254181 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
USP29-201ENST00000254181 SLC52A1Q9NWF4 448 aa9.53□□□□□ -0.88
USP29-201ENST00000254181 PLIN1O60240 522 aa9.53□□□□□ -0.88
USP29-201ENST00000254181 TNNT1P13805 278 aa9.53□□□□□ -0.88
USP29-201ENST00000254181 TERF1P54274 439 aa9.53□□□□□ -0.88
USP29-201ENST00000254181 CHAF1AQ13111 956 aaPredicted RBP9.53□□□□□ -0.88
USP29-201ENST00000254181 POLD1P28340 1107 aa9.52□□□□□ -0.89
USP29-201ENST00000254181 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
USP29-201ENST00000254181 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.89
USP29-201ENST00000254181 LMOD3Q0VAK6 560 aa9.52□□□□□ -0.89
USP29-201ENST00000254181 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
USP29-201ENST00000254181 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
USP29-201ENST00000254181 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
USP29-201ENST00000254181 KIF3AQ9Y496 699 aa9.52□□□□□ -0.89
USP29-201ENST00000254181 FOSBP53539 338 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 CCDC125Q86Z20 511 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 BANK1Q8NDB2 785 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 NBPF1Q3BBV0 1214 aa9.51□□□□□ -0.89
USP29-201ENST00000254181 APBB1IPQ7Z5R6 666 aaPredicted RBP9.51□□□□□ -0.89
USP29-201ENST00000254181 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
USP29-201ENST00000254181 MARCH6O60337 910 aa9.5□□□□□ -0.89
USP29-201ENST00000254181 RALBP1Q15311 655 aa9.5□□□□□ -0.89
USP29-201ENST00000254181 GBP4Q96PP9 640 aa9.5□□□□□ -0.89
USP29-201ENST00000254181 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms