RNA–Protein interactions for RNA: ENST00000250241.12

ILF3-201, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-201ENST00000250241 KIAA1107Q9UPP5 1409 aa17.76■□□□□ 0.43
ILF3-201ENST00000250241 ZCCHC11Q5TAX3 1644 aaKnown RBP17.75■□□□□ 0.43
ILF3-201ENST00000250241 PREX2Q70Z35 1606 aa17.75■□□□□ 0.43
ILF3-201ENST00000250241 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
ILF3-201ENST00000250241 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
ILF3-201ENST00000250241 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
ILF3-201ENST00000250241 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
ILF3-201ENST00000250241 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
ILF3-201ENST00000250241 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
ILF3-201ENST00000250241 C11orf95C9JLR9 678 aaPredicted RBP17.72■□□□□ 0.43
ILF3-201ENST00000250241 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
ILF3-201ENST00000250241 SHANK2Q9UPX8 1470 aa17.71■□□□□ 0.43
ILF3-201ENST00000250241 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
ILF3-201ENST00000250241 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
ILF3-201ENST00000250241 PLCH2O75038 1416 aa17.69■□□□□ 0.42
ILF3-201ENST00000250241 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
ILF3-201ENST00000250241 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
ILF3-201ENST00000250241 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
ILF3-201ENST00000250241 PLEKHH2Q8IVE3 1493 aa17.68■□□□□ 0.42
ILF3-201ENST00000250241 TRAPPC8Q9Y2L5 1435 aa17.68■□□□□ 0.42
ILF3-201ENST00000250241 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
ILF3-201ENST00000250241 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
ILF3-201ENST00000250241 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.42
ILF3-201ENST00000250241 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
ILF3-201ENST00000250241 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
ILF3-201ENST00000250241 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
ILF3-201ENST00000250241 FAM135AQ9P2D6 1515 aa17.61■□□□□ 0.41
ILF3-201ENST00000250241 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
ILF3-201ENST00000250241 CCDC144AA2RUR9 1427 aa17.59■□□□□ 0.41
ILF3-201ENST00000250241 KIF3BO15066 747 aa17.58■□□□□ 0.41
ILF3-201ENST00000250241 PODXL2Q9NZ53 605 aa17.58■□□□□ 0.41
ILF3-201ENST00000250241 KIF7Q2M1P5 1343 aa17.58■□□□□ 0.41
ILF3-201ENST00000250241 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
ILF3-201ENST00000250241 USP47Q96K76 1375 aa17.58■□□□□ 0.4
ILF3-201ENST00000250241 PLEKHG5O94827 1062 aa17.58■□□□□ 0.4
ILF3-201ENST00000250241 CCDC7Q96M83 1385 aa17.58■□□□□ 0.4
ILF3-201ENST00000250241 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
ILF3-201ENST00000250241 FANCAO15360 1455 aa17.57■□□□□ 0.4
ILF3-201ENST00000250241 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
ILF3-201ENST00000250241 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
ILF3-201ENST00000250241 ABCC1P33527 1531 aa17.54■□□□□ 0.4
ILF3-201ENST00000250241 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
ILF3-201ENST00000250241 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
ILF3-201ENST00000250241 GLIPR1L2Q4G1C9 344 aa17.53■□□□□ 0.4
ILF3-201ENST00000250241 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
ILF3-201ENST00000250241 ADGRL1O94910 1474 aa17.52■□□□□ 0.4
ILF3-201ENST00000250241 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
ILF3-201ENST00000250241 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
ILF3-201ENST00000250241 KDM5DQ9BY66 1539 aa17.5■□□□□ 0.39
ILF3-201ENST00000250241 CNTLNQ9NXG0 1405 aa17.49■□□□□ 0.39
ILF3-201ENST00000250241 MAST1Q9Y2H9 1570 aa17.48■□□□□ 0.39
ILF3-201ENST00000250241 GGT6Q6P531 493 aa17.48■□□□□ 0.39
ILF3-201ENST00000250241 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
ILF3-201ENST00000250241 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
ILF3-201ENST00000250241 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
ILF3-201ENST00000250241 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
ILF3-201ENST00000250241 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
ILF3-201ENST00000250241 IPO9Q96P70 1041 aaKnown RBP17.46■□□□□ 0.39
ILF3-201ENST00000250241 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
ILF3-201ENST00000250241 CD109Q6YHK3 1445 aa17.45■□□□□ 0.38
ILF3-201ENST00000250241 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
ILF3-201ENST00000250241 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
ILF3-201ENST00000250241 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
ILF3-201ENST00000250241 UNC13BO14795 1591 aa17.42■□□□□ 0.38
ILF3-201ENST00000250241 KANK1Q14678 1352 aa17.42■□□□□ 0.38
ILF3-201ENST00000250241 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
ILF3-201ENST00000250241 ATP7AQ04656 1500 aa17.41■□□□□ 0.38
ILF3-201ENST00000250241 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
ILF3-201ENST00000250241 NEFMP07197 916 aa17.4■□□□□ 0.38
ILF3-201ENST00000250241 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
ILF3-201ENST00000250241 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 A2MP01023 1474 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 RTEL1-TNFRSF6BF6WH68 1400 aa17.39■□□□□ 0.37
ILF3-201ENST00000250241 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
ILF3-201ENST00000250241 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
ILF3-201ENST00000250241 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
ILF3-201ENST00000250241 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
ILF3-201ENST00000250241 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
ILF3-201ENST00000250241 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
ILF3-201ENST00000250241 KDM5CP41229 1560 aa17.36■□□□□ 0.37
ILF3-201ENST00000250241 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
ILF3-201ENST00000250241 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
ILF3-201ENST00000250241 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.37
ILF3-201ENST00000250241 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.36
ILF3-201ENST00000250241 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
ILF3-201ENST00000250241 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
ILF3-201ENST00000250241 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
ILF3-201ENST00000250241 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
ILF3-201ENST00000250241 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
ILF3-201ENST00000250241 E9PCH4 1651 aa17.31■□□□□ 0.36
ILF3-201ENST00000250241 ATP10AO60312 1499 aa17.3■□□□□ 0.36
ILF3-201ENST00000250241 SLC4A3P48751 1232 aa17.29■□□□□ 0.36
ILF3-201ENST00000250241 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
ILF3-201ENST00000250241 INO80Q9ULG1 1556 aaPredicted RBP17.29■□□□□ 0.36
ILF3-201ENST00000250241 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
ILF3-201ENST00000250241 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
ILF3-201ENST00000250241 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms