RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IRX6P78412 446 aaPredicted RBP29.56■■■□□ 2.32
SH2D3A-201ENST00000245908 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
SH2D3A-201ENST00000245908 PLEKHH2Q8IVE3 1493 aa29.54■■■□□ 2.32
SH2D3A-201ENST00000245908 DCAF11Q8TEB1 546 aa29.54■■■□□ 2.32
SH2D3A-201ENST00000245908 TRPM1Q7Z4N2 1603 aa29.52■■■□□ 2.32
SH2D3A-201ENST00000245908 KDM2AQ9Y2K7 1162 aa29.52■■■□□ 2.32
SH2D3A-201ENST00000245908 RBM19Q9Y4C8 960 aaKnown RBP29.52■■■□□ 2.32
SH2D3A-201ENST00000245908 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
SH2D3A-201ENST00000245908 E9PCH4 1651 aa29.51■■■□□ 2.31
SH2D3A-201ENST00000245908 IQGAP3Q86VI3 1631 aa29.51■■■□□ 2.31
SH2D3A-201ENST00000245908 CCDC144AA2RUR9 1427 aa29.5■■■□□ 2.31
SH2D3A-201ENST00000245908 PRAG1Q86YV5 1406 aa29.48■■■□□ 2.31
SH2D3A-201ENST00000245908 ST20-MTHFSA0A0A6YYL1 179 aa29.48■■■□□ 2.31
SH2D3A-201ENST00000245908 PLA2R1Q13018 1463 aa29.46■■■□□ 2.31
SH2D3A-201ENST00000245908 PPP4R2Q9NY27 417 aa29.46■■■□□ 2.31
SH2D3A-201ENST00000245908 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
SH2D3A-201ENST00000245908 DUOX2Q9NRD8 1548 aa29.44■■■□□ 2.3
SH2D3A-201ENST00000245908 MAGI2Q86UL8 1455 aa29.43■■■□□ 2.3
SH2D3A-201ENST00000245908 KTN1Q86UP2 1357 aaKnown RBP29.42■■■□□ 2.3
SH2D3A-201ENST00000245908 LAMC1P11047 1609 aa29.42■■■□□ 2.3
SH2D3A-201ENST00000245908 A2MP01023 1474 aa29.4■■■□□ 2.3
SH2D3A-201ENST00000245908 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
SH2D3A-201ENST00000245908 GPRASP1Q5JY77 1395 aa29.39■■■□□ 2.3
SH2D3A-201ENST00000245908 ERBINQ96RT1 1412 aa29.38■■■□□ 2.29
SH2D3A-201ENST00000245908 PNISRQ8TF01 805 aaKnown RBP29.38■■■□□ 2.29
SH2D3A-201ENST00000245908 ATP10AO60312 1499 aa29.38■■■□□ 2.29
SH2D3A-201ENST00000245908 PLCH2O75038 1416 aa29.37■■■□□ 2.29
SH2D3A-201ENST00000245908 CNGB1Q14028 1251 aaPredicted RBP29.37■■■□□ 2.29
SH2D3A-201ENST00000245908 UHRF1BP1LA0JNW5 1464 aa29.36■■■□□ 2.29
SH2D3A-201ENST00000245908 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
SH2D3A-201ENST00000245908 EIF2AK4Q9P2K8 1649 aaKnown RBP29.34■■■□□ 2.29
SH2D3A-201ENST00000245908 BRD4O60885 1362 aaPredicted RBP29.34■■■□□ 2.29
SH2D3A-201ENST00000245908 RALBP1Q15311 655 aa29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 ABCC1P33527 1531 aa29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 PRDM15P57071 1507 aaPredicted RBP29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 TMC1Q8TDI8 760 aa29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 NUDCQ9Y266 331 aa29.33■■■□□ 2.29
SH2D3A-201ENST00000245908 MYBBP1AQ9BQG0 1328 aaKnown RBP29.32■■■□□ 2.28
SH2D3A-201ENST00000245908 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
SH2D3A-201ENST00000245908 RGL3Q3MIN7 710 aa29.29■■■□□ 2.28
SH2D3A-201ENST00000245908 EFCAB2Q5VUJ9 269 aa29.27■■■□□ 2.28
SH2D3A-201ENST00000245908 COL17A1Q9UMD9 1497 aaPredicted RBP29.27■■■□□ 2.28
SH2D3A-201ENST00000245908 RNF123Q5XPI4 1314 aa29.27■■■□□ 2.28
SH2D3A-201ENST00000245908 NBPF1Q3BBV0 1214 aa29.27■■■□□ 2.28
SH2D3A-201ENST00000245908 PARD3Q8TEW0 1356 aa29.23■■■□□ 2.27
SH2D3A-201ENST00000245908 RNF17Q9BXT8 1623 aaKnown RBP29.22■■■□□ 2.27
SH2D3A-201ENST00000245908 ARAP3Q8WWN8 1544 aa29.22■■■□□ 2.27
SH2D3A-201ENST00000245908 TRAPPC8Q9Y2L5 1435 aa29.22■■■□□ 2.27
SH2D3A-201ENST00000245908 B4GALNT3Q6L9W6 998 aa29.2■■■□□ 2.26
SH2D3A-201ENST00000245908 TESK2Q96S53 571 aa29.18■■■□□ 2.26
SH2D3A-201ENST00000245908 FANCIQ9NVI1 1328 aa29.16■■■□□ 2.26
SH2D3A-201ENST00000245908 RTEL1-TNFRSF6BF6WH68 1400 aa29.16■■■□□ 2.26
SH2D3A-201ENST00000245908 PER1O15534 1290 aaPredicted RBP29.16■■■□□ 2.26
SH2D3A-201ENST00000245908 NLRP13Q86W25 1043 aa29.15■■■□□ 2.26
SH2D3A-201ENST00000245908 DISP3Q9P2K9 1392 aa29.15■■■□□ 2.26
SH2D3A-201ENST00000245908 ZFYVE16Q7Z3T8 1539 aa29.15■■■□□ 2.26
SH2D3A-201ENST00000245908 WASHC2CQ9Y4E1 1318 aa29.13■■■□□ 2.25
SH2D3A-201ENST00000245908 TRPM2O94759 1503 aa29.11■■■□□ 2.25
SH2D3A-201ENST00000245908 DEPDC5O75140 1603 aa29.11■■■□□ 2.25
SH2D3A-201ENST00000245908 MADDQ8WXG6 1647 aa29.11■■■□□ 2.25
SH2D3A-201ENST00000245908 SPAG9O60271 1321 aaKnown RBP29.1■■■□□ 2.25
SH2D3A-201ENST00000245908 CEP152O94986 1710 aa29.09■■■□□ 2.25
SH2D3A-201ENST00000245908 SPHKAPQ2M3C7 1700 aa29.08■■■□□ 2.25
SH2D3A-201ENST00000245908 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
SH2D3A-201ENST00000245908 TMF1P82094 1093 aa29.06■■■□□ 2.24
SH2D3A-201ENST00000245908 PTPRTO14522 1441 aa29.05■■■□□ 2.24
SH2D3A-201ENST00000245908 ABCA9Q8IUA7 1624 aa29.04■■■□□ 2.24
SH2D3A-201ENST00000245908 TET3O43151 1660 aa29.04■■■□□ 2.24
SH2D3A-201ENST00000245908 ZMYM4Q5VZL5 1548 aa29.04■■■□□ 2.24
SH2D3A-201ENST00000245908 SENP3-EIF4A1A0A087X0R7 540 aa29.04■■■□□ 2.24
SH2D3A-201ENST00000245908 MSH5O43196 834 aa29.04■■■□□ 2.24
SH2D3A-201ENST00000245908 INSRP06213 1382 aa29.03■■■□□ 2.24
SH2D3A-201ENST00000245908 INO80Q9ULG1 1556 aaPredicted RBP29.03■■■□□ 2.24
SH2D3A-201ENST00000245908 WDR7Q9Y4E6 1490 aa29.02■■■□□ 2.24
SH2D3A-201ENST00000245908 AFAP1Q8N556 730 aa29.01■■■□□ 2.24
SH2D3A-201ENST00000245908 CLTCL1P53675 1640 aa29.01■■■□□ 2.24
SH2D3A-201ENST00000245908 PANK3Q9H999 370 aa29■■■□□ 2.23
SH2D3A-201ENST00000245908 VWDEQ8N2E2 1590 aa29■■■□□ 2.23
SH2D3A-201ENST00000245908 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
SH2D3A-201ENST00000245908 STAC3Q96MF2 364 aa28.98■■■□□ 2.23
SH2D3A-201ENST00000245908 PDE3BQ13370 1112 aa28.97■■■□□ 2.23
SH2D3A-201ENST00000245908 SCAPERQ9BY12 1400 aa28.96■■■□□ 2.23
SH2D3A-201ENST00000245908 BLMP54132 1417 aaPredicted RBP28.96■■■□□ 2.23
SH2D3A-201ENST00000245908 FANCAO15360 1455 aa28.96■■■□□ 2.23
SH2D3A-201ENST00000245908 CC2D1BQ5T0F9 858 aaKnown RBP28.95■■■□□ 2.23
SH2D3A-201ENST00000245908 CCDC136Q96JN2 1154 aa28.95■■■□□ 2.23
SH2D3A-201ENST00000245908 NEURL4Q96JN8 1562 aa28.94■■■□□ 2.22
SH2D3A-201ENST00000245908 SCAF11Q99590 1463 aaKnown RBP28.92■■■□□ 2.22
SH2D3A-201ENST00000245908 KANK1Q14678 1352 aa28.91■■■□□ 2.22
SH2D3A-201ENST00000245908 KIAA1210Q9ULL0 1709 aa28.91■■■□□ 2.22
SH2D3A-201ENST00000245908 RRP1P56182 461 aaKnown RBP28.91■■■□□ 2.22
SH2D3A-201ENST00000245908 SYNMO15061 1565 aa28.9■■■□□ 2.22
SH2D3A-201ENST00000245908 MROH1Q8NDA8 1641 aa28.88■■■□□ 2.21
SH2D3A-201ENST00000245908 RCAN3Q9UKA8 241 aa28.87■■■□□ 2.21
SH2D3A-201ENST00000245908 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
SH2D3A-201ENST00000245908 CDCA8Q53HL2 280 aa28.83■■■□□ 2.21
SH2D3A-201ENST00000245908 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
SH2D3A-201ENST00000245908 SALL2Q9Y467 1007 aaPredicted RBP28.83■■■□□ 2.21
SH2D3A-201ENST00000245908 MYOM1P52179 1685 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms