RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
SSR1-201ENST00000244763 EVC2Q86UK5 1308 aa9.14□□□□□ -0.95
SSR1-201ENST00000244763 B4GALNT3Q6L9W6 998 aa9.14□□□□□ -0.95
SSR1-201ENST00000244763 NGEFQ8N5V2 710 aa9.14□□□□□ -0.95
SSR1-201ENST00000244763 NAP1L5Q96NT1 182 aaPredicted RBP9.14□□□□□ -0.95
SSR1-201ENST00000244763 NOL10Q9BSC4 688 aaKnown RBP9.13□□□□□ -0.95
SSR1-201ENST00000244763 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
SSR1-201ENST00000244763 PHF14O94880 888 aa9.13□□□□□ -0.95
SSR1-201ENST00000244763 AEBP2Q6ZN18 517 aaPredicted RBP9.13□□□□□ -0.95
SSR1-201ENST00000244763 NOC3LQ8WTT2 800 aaKnown RBP9.13□□□□□ -0.95
SSR1-201ENST00000244763 COG3Q96JB2 828 aa9.13□□□□□ -0.95
SSR1-201ENST00000244763 NCBP3Q53F19 620 aaKnown RBP9.13□□□□□ -0.95
SSR1-201ENST00000244763 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 MARCH6O60337 910 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
SSR1-201ENST00000244763 RASSF8Q8NHQ8 419 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 MROH2BQ7Z745 1585 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 APBB1O00213 710 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 TEFQ10587 303 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
SSR1-201ENST00000244763 ST18O60284 1047 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 SLC4A10Q6U841 1118 aa9.12□□□□□ -0.95
SSR1-201ENST00000244763 KIF16BQ96L93 1317 aa9.11□□□□□ -0.95
SSR1-201ENST00000244763 WWC1Q8IX03 1113 aa9.11□□□□□ -0.95
SSR1-201ENST00000244763 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
SSR1-201ENST00000244763 PTPRGP23470 1445 aa9.11□□□□□ -0.95
SSR1-201ENST00000244763 CGNL1Q0VF96 1302 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 AKAP17AQ02040 695 aaKnown RBP9.1□□□□□ -0.95
SSR1-201ENST00000244763 WASHC2AQ641Q2 1341 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 DCAF8L1A6NGE4 600 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 KIF15Q9NS87 1388 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 DDX58O95786 925 aaKnown RBP9.1□□□□□ -0.95
SSR1-201ENST00000244763 SYNE3Q6ZMZ3 975 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
SSR1-201ENST00000244763 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
SSR1-201ENST00000244763 SF3A1Q15459 793 aaKnown RBP9.09□□□□□ -0.95
SSR1-201ENST00000244763 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
SSR1-201ENST00000244763 ATP6V1DQ9Y5K8 247 aa9.09□□□□□ -0.96
SSR1-201ENST00000244763 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
SSR1-201ENST00000244763 TPM2P07951 284 aa9.08□□□□□ -0.96
SSR1-201ENST00000244763 PSME1Q06323 249 aa9.08□□□□□ -0.96
SSR1-201ENST00000244763 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
SSR1-201ENST00000244763 CTDP1Q9Y5B0 961 aaPredicted RBP9.08□□□□□ -0.96
SSR1-201ENST00000244763 FOXD1Q16676 465 aa9.08□□□□□ -0.96
SSR1-201ENST00000244763 ROCK1Q13464 1354 aa9.08□□□□□ -0.96
SSR1-201ENST00000244763 HMGB2P26583 209 aaKnown RBP9.08□□□□□ -0.96
SSR1-201ENST00000244763 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
SSR1-201ENST00000244763 RUFY2Q8WXA3 655 aa9.08□□□□□ -0.96
SSR1-201ENST00000244763 CYB5RLQ6IPT4 315 aa9.07□□□□□ -0.96
SSR1-201ENST00000244763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.07□□□□□ -0.962e-7■□□□□ 10
SSR1-201ENST00000244763 PRM3Q9NNZ6 103 aa9.07□□□□□ -0.96
SSR1-201ENST00000244763 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
SSR1-201ENST00000244763 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
SSR1-201ENST00000244763 TPM3P06753 285 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 FAM184AQ8NB25 1140 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 WIZO95785 1651 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 CCDC47Q96A33 483 aaKnown RBP9.06□□□□□ -0.96
SSR1-201ENST00000244763 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 ATF3P18847 181 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 FANCD2Q9BXW9 1451 aa9.06□□□□□ -0.96
SSR1-201ENST00000244763 MYBBP1AQ9BQG0 1328 aaKnown RBP9.06□□□□□ -0.96
SSR1-201ENST00000244763 E9PSI1 815 aa9.05□□□□□ -0.96
SSR1-201ENST00000244763 VPS53Q5VIR6 699 aa9.05□□□□□ -0.96
SSR1-201ENST00000244763 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
SSR1-201ENST00000244763 H3BQV1 296 aa9.05□□□□□ -0.96
SSR1-201ENST00000244763 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
SSR1-201ENST00000244763 TPD52L1Q16890 204 aaPredicted RBP9.05□□□□□ -0.96
SSR1-201ENST00000244763 MSH5O43196 834 aa9.04□□□□□ -0.96
SSR1-201ENST00000244763 A0A0U1RQG5 324 aaPredicted RBP9.04□□□□□ -0.96
SSR1-201ENST00000244763 TPM1P09493 284 aa9.04□□□□□ -0.96
SSR1-201ENST00000244763 C9orf78Q9NZ63 289 aaPredicted RBP9.04□□□□□ -0.96
SSR1-201ENST00000244763 TRIM29Q14134 588 aa9.04□□□□□ -0.96
SSR1-201ENST00000244763 VPS37DQ86XT2 251 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 MIA2Q96PC5 1412 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 FHOD3Q2V2M9 1422 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 DHX57Q6P158 1386 aaKnown RBP9.03□□□□□ -0.96
SSR1-201ENST00000244763 TRDNQ13061 729 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 HOOK1Q9UJC3 728 aaKnown RBP9.03□□□□□ -0.96
SSR1-201ENST00000244763 HSP90AB4PQ58FF6 505 aa9.03□□□□□ -0.96
SSR1-201ENST00000244763 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
SSR1-201ENST00000244763 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
SSR1-201ENST00000244763 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.97
SSR1-201ENST00000244763 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
SSR1-201ENST00000244763 RAPGEF4Q8WZA2 1011 aa9.02□□□□□ -0.97
SSR1-201ENST00000244763 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
SSR1-201ENST00000244763 ERICH2A1L162 156 aa9.01□□□□□ -0.97
SSR1-201ENST00000244763 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
SSR1-201ENST00000244763 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
SSR1-201ENST00000244763 GOLGA6L19H0YKK7 550 aa9.01□□□□□ -0.97
SSR1-201ENST00000244763 PRDM2Q13029 1718 aa9.01□□□□□ -0.97
SSR1-201ENST00000244763 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
SSR1-201ENST00000244763 MYOM3Q5VTT5 1437 aa9.01□□□□□ -0.97
SSR1-201ENST00000244763 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
SSR1-201ENST00000244763 ANKRD20A12PQ8NF67 263 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms